mRNA_H-akashiwo_Contig1005.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1005.1.1
Unique NamemRNA_H-akashiwo_Contig1005.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A7S3XSK1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSK1_HETAK)

HSP 1 Score: 597 bits (1540), Expect = 4.300e-211
Identity = 293/338 (86.69%), Postives = 314/338 (92.90%), Query Frame = 1
Query:  580 RIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPMASQPFQVV*CDACIIRSRNIMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDN------GTFPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPVNTAVEELRSSAEVVDPEIYVRNLRERILTAFEHTTKRLKAIQNSYAHPDLLEEKFKVGEKVWMLDPRKATGDNLKPMWKGPFEITRVISAAVYQLQE 1575
            RIQL++PTALQ+IMLQWAHQG FGAHIGRDK LEILRQGYFWVNMARDMTTFV +CQT Q+CKNPAPQL AR  TMQRPMASQPFQV+  DAC IRSRNIMIFVDQFSGYVELELMRGPITGR LAE FL C+V RHSTP+IAIMDN      GTFPQVLRTLGVKLTPVS+YHPQANGRAERMVS+IKKTLKTMV+ENT+AW+KLIPLAAFACNTA HRETKETPFFLVHGRDAVLPGP+NTAV+ELR+SAEV DPEIYV+NLRERILTAF+HTT+RLKAIQNSYAHPDLLEEKFKVGE+VWMLDPRKATGDNLKPMWKGPFEI  VISAAVYQ+QE
Sbjct:    1 RIQLMVPTALQEIMLQWAHQGTFGAHIGRDKALEILRQGYFWVNMARDMTTFVNSCQTCQRCKNPAPQLRARVTTMQRPMASQPFQVIHGDACTIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFLKCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTPVSVYHPQANGRAERMVSIIKKTLKTMVLENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAIQNSYAHPDLLEEKFKVGERVWMLDPRKATGDNLKPMWKGPFEIIHVISAAVYQIQE 338          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK)

HSP 1 Score: 419 bits (1077), Expect = 2.990e-136
Identity = 215/268 (80.22%), Postives = 227/268 (84.70%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAG---------------------------TEEKQLGIQPADISKAQQEEDSFCGPIMEYLRTPGGNKAVSGEIVHWSRHMMVEKGLLWHQYEYQGVNRRRGTRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARD 723
            ASRLCS TEANYSATEL+CLGVIYALQQFRCYVMGR FTLVTDHKSLEDL+RIKNPTGRRARWLMTLMEFMY TQYR+ GKLMAPADALSRLPRAGA QPKEGE D+ENIVAAITRAQAG                           TEEKQLGI+P DISKAQQE D FCGPIMEYL+TPGGNK VS EIVHWSR+M++EKGLLWHQYEYQG NRRRGTRIQLV+PTAL ++MLQWAHQGAFGAHIGRDK LEILRQGYFWVNMARD
Sbjct:  424 ASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYRK-GKLMAPADALSRLPRAGAIQPKEGEADDENIVAAITRAQAGEAQQLKKQTRKRTRMVTEEEPQEKMSETEEKQLGIRPEDISKAQQE-DEFCGPIMEYLKTPGGNKTVSREIVHWSRYMILEKGLLWHQYEYQGDNRRRGTRIQLVVPTALHEVMLQWAHQGAFGAHIGRDKALEILRQGYFWVNMARD 689          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A147BAZ1_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BAZ1_IXORI)

HSP 1 Score: 197 bits (502), Expect = 8.460e-51
Identity = 163/546 (29.85%), Postives = 247/546 (45.24%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAGTEEKQLGIQPADISKAQQEEDSFCGPIMEYLRTPGGNKAVSGEIVHWSRHMMVEKGLLWHQYEYQGVNRRRG-TRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPM---ASQPFQVV*CDAC----IIRSRN--IMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDNGT------FPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPVNTAVEELRSSAEVVDPEIYVRNLRERILTAFEHTTKRLK---AIQNSYAHPDLLEEKFKVGEKVWM--LDPRKATGDNLKPMWKGPFEITRVISAAVYQLQE 1575
            ASR  +  E NYSATE +CL VI+A + FRCY+ GR F ++TD + L  L  +++P  R ARW + L E+ Y+  ++  G     ADALSR              D  + V A+       E+  +        K +QE D     I + L    GN +   +     R  ++ KG         G  +R G  R + VIP +L + +L   H   +  H G  K L  +   Y W  M RD+ ++  +C++ Q  K      S + R     +     +PF+    D      I    N  +++FVD F+ + E   +R       +A  F+  +V RH  P   + D GT        +  R LGVK    + YHP++NG  ER+   IK  L  +V  +   WD  +P   F+ NTA+H  T+ETPF+L HGRD  LP  +  A     S  +    E Y   L  R+  A E T + L+   A + +         +F+ G++V++    P K     L   WKGP+ ITR+++  V Q++E
Sbjct:  568 ASRQLNKAEVNYSATEKECLAVIWATRHFRCYLYGRRFKIITDCRPLRWLMNVRDPGSRLARWNLQLQEYDYEIIHKP-GSGHTNADALSRA------------RDPPSTVGAVLSFVPVFEDGTI--------KDEQERDPELRKISDRL---AGNDS-DDQGYFRDRMGLLRKG---------GPGQREGRARERTVIPKSLVEKVLYAYHNAPYSGHFGFKKTLRKITAKYVWRGMHRDVKSYCASCESCQLRK------SGQRRRAPLELFGEVKEPFERTALDIVGPLPITTEGNKYVLVFVDHFTKFAEALPLRDQ-KAETVARAFVERIVLRHGVPQQLLTDQGTNFVSGLMKETCRLLGVKKLTTTAYHPESNGAVERLNKTIKGLLSHLVARDQRDWDLWMPYVLFSYNTAVHESTEETPFYLCHGRDPGLPHEILDAP----SVPKYACLEDYRAELTLRMRAAHEVTGEALRKSQACRKTQYDRKTKSPEFREGDRVYVDVRYPGKGLSQKLGQKWKGPYRITRLVTPVVAQVKE 1068          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A090XF40_IXORI (RNA-directed DNA polymerase n=2 Tax=Ixodes ricinus TaxID=34613 RepID=A0A090XF40_IXORI)

HSP 1 Score: 195 bits (495), Expect = 1.570e-50
Identity = 151/531 (28.44%), Postives = 240/531 (45.20%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAGTEEKQLGIQPADISKAQQEEDSFCGPIMEYLRTPGGNKAVSGEIVHWSRHMMVEKGLLWHQ---YEYQGVNRRRGTRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPMASQPFQVV*CD------ACIIRSRNIMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDNGT------FPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPVNTAVEELRSSAEVVDPEIYVRNLRERILTAFEHTTKRLKAIQNSYAHPDLLEEKFKVGEKVWMLDPRKATGDNLKPM--WKGPFEITR 1542
            ASR  ++ EANYS TE +CL V+YA +QFR Y+ G  FT+VTD  SL  L  +KNP GR  RW + L EF    ++R  GK    ADALSRLP   A Q      +EE +   +             ++  DI + Q+  D F GPI+ +L  P     V  ++   +R   +  G+L+ +   YE +        R+ L +P  ++  +L   H      H+G  + ++ +RQ YFW  M  D+T +V +C   Q  K P  + +   + +  P A +PFQ V  D      +    ++ +++ +D  + +VE  +     T    A+ F+  VV RH  P   + D G         ++ R L       + YHPQ NG  ER    +   +   V  +   WD+ +P A FA N+++H  T  +PFFL++G +  L  P++  +       +    E  +R          E   +  +  +  Y        +FK G+ V++  P    G   K +  + GPF + R
Sbjct:  190 ASRHLNAAEANYSTTEQECLAVVYATRQFRPYLFGVPFTVVTDQSSLTWLMTVKNPNGRLIRWSLLLQEFNIALKHRP-GKKNGNADALSRLPYDPAPQ------EEEELPLLL-------------VEGGDIVQNQRA-DRFLGPIVGHLERP--QNPVVRKVKRAARAFSLVNGILFRRAKGYEAE--------RLALAVPRTMRQEILVSCHDDVTAGHLGIKRTIDKIRQRYFWPRMFADITRYVMSCPDCQTRKTPPLRPAGLLQPL--PPAQRPFQRVGMDFLGPLTSSQDGNKYVVVIIDYHTKWVE-TVATPDATAASAAKAFMQAVVLRHGAPETVLTDRGRHFVSEMMEELFRLLDTNHARTTAYHPQTNGLCERFNRTLADMISKYVSSSHQDWDQFLPYATFAYNSSVHDTTGYSPFFLLYGHEPTL--PIDAMLHLQLGHLKTPSNEEVMRRWESAKQIVAERERRAQRNNKERYDQHRRT-SRFKPGDLVYIRMPTSKRGRTTKFLHAYHGPFRVVR 683          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A2R5LP11_9ACAR (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LP11_9ACAR)

HSP 1 Score: 196 bits (498), Expect = 1.950e-50
Identity = 156/533 (29.27%), Postives = 240/533 (45.03%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAGTEEKQLGIQPADISKAQQEEDSFCGPIMEYLRTPGGNKAVSGEIVHWSRHMMVEKGLLWHQYEYQGVNRRRGTRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPMASQPFQVV*CDAC--IIRSRN----IMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDNGT------FPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPVNTAVEELRSSAEVVDPEIYVRNLRERILTAFEHTTKRLKAIQNSYAHPDLLEEK-----FKVGEKVWMLDPRKATGDNLKPM--WKGPFEITR 1542
            ASR  +  E+NYS TE +CL V+YA +QFR Y+ G  FT+VTD  SL  L  +KN  GR  RW + L EF    ++R  G+    ADALSRLP   A +       +E+++  +   Q    E+Q G             D F   I+ +L  P  +  V  ++   +R   +  G+L     Y+       TR  LV+P  L+  +L+  H     AH+G  +  E +R  +FW  M  D+T +V  C+  Q  K  AP L         P  S+PFQ V  D      +SR+    I++  D  S + E  +     T    A+ F+  +V RH  P   I D G          +L  L       + YHPQ NG  ER    +   +   V  N   WD+ +P   FA N++    T  TPFFL+HG +     P++ A++   +     DPEI    +++R+  A E   +R +  Q    + +  +++     F+ G+ V++  P ++     K +  + GPF + R
Sbjct:  376 ASRHLNRAESNYSTTEKECLAVVYACRQFRPYIFGSSFTVVTDQSSLTWLMNVKNSNGRLIRWSLLLQEFNITLRHRA-GRKNNNADALSRLPYDPAPE------SDESVLPLLVTDQGNIAEQQRG-------------DPFLARIIRHLENP--DDPVDRKVKRTARAFRMVDGVL-----YRRAKNEEETRFVLVVPGCLRPEILRACHDDITAAHLGIKRTWEKVRSRFFWPKMFSDVTKYVMGCKDCQTRK--APPLKPAGFLQPIPPVSRPFQQVGMDFLGPFTKSRHGNRYILVMTDYHSKFAE-AVATPAATASEAAKGFIENIVLRHGAPDKLITDRGQHFVATMMKGILALLKTNHATTTAYHPQTNGLCERFNKTLVDMISMYVSSNHQDWDEFLPYVLFAYNSSQQETTGHTPFFLLHGYEPAF--PIDVALQNRYNEPSSQDPEI----IQQRLQLAREIVAERERNAQEK--NKERYDQRRRGHNFQPGDFVYVWSPPRSKKRTTKLLHCYHGPFRLVR 870          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A443SAU2_9ACAR (RNA-directed DNA polymerase n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SAU2_9ACAR)

HSP 1 Score: 196 bits (499), Expect = 2.180e-50
Identity = 153/540 (28.33%), Postives = 238/540 (44.07%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAGTEEKQLGIQPADISKAQQEEDSFCGPIMEYLRTPGGNKAVSGEIVHWSRHMMVEKGLLWHQYEYQGVNRRRGTRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPMASQPFQVV*CDAC------IIRSRNIMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDNGT------FPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPVNTAVEELRSSAEVVDPEIYVRNL-RERILTAFEHTTKRLKAIQNSYAHPDLLEEKFKVGEKVWMLDPRKATG--DNLKPMWKGPFEITRVISAAVYQLQE 1575
            ASR     E  Y  TE +CL +++A+  FR Y++GR FT+VTDH  L  L   +  + R  RW+M LMEF + T   +RGK     D LSR P        + E D E  V+ I                 DI+  Q             LR P  N  +   I H ++   +   +L     Y+ V    G +  L +P  L + +L   H      H+G DK +  +RQ + W  M+RD+  ++ +C   QK    +     +   MQ+   + PFQ+V  D          ++  I++ +D  + ++E + +R      ++ +     V  RHS P   I D G       F   L   GVK T  + YHPQ+NG  ER    +K  +   V  +   WD ++P A FACNT+  + TK+TPF L++GRDAV       +++   +S E+ +   ++R L RE I+ + E   +        Y +       F  G+ V    P    G  D L     GP++I R +S   Y++++
Sbjct:  299 ASRSLDDNEKKYGVTEKECLAIVWAILHFRHYLLGRHFTVVTDHHPLCWLHSTQYVSARLTRWIMKLMEFDF-TIVHKRGKTHCNVDCLSRYPVT-----VKTENDNEAFVSTINSNM-------------DIANMQ-------------LREPYLNDIIRNIIEHSTKGFKIVDKIL-----YRTVKTEFGDKTLLCLPRKLINYVLSELHDSKESGHLGFDKTINKVRQRFQWKGMSRDVKAYIDSCVQCQKANQKS---KMKHGLMQQMPTADPFQIVAIDFAGPLPKTARQNEYIVVLIDFGTRWIEAKALRAA-NADIVIKFLQESVFLRHSVPKQLISDRGVQFTSSKFQDFLDQHGVKHTQTTAYHPQSNGCVERQNRTLKNIMSKYVASHQKDWDLILPYAVFACNTSEQKSTKQTPFRLLYGRDAVFRIDNLMSLKTNENSRELKENITFLRELAREEIMKSQETNME--------YVNRSRQNVNFNEGDIVLQWKPNAEVGKADKLTTKMSGPYKIIRKVSDVNYEIED 789          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A224XGW9_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XGW9_9HEMI)

HSP 1 Score: 193 bits (490), Expect = 3.030e-49
Identity = 151/552 (27.36%), Postives = 244/552 (44.20%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAGTEEKQLGIQPADISKAQQEEDSFCGPIMEYLRTP-GGNKAVSGEIVHWSRHMMVEKGLLWHQYEYQGVNRRRG--TRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPMA-----SQPFQVV*CD------ACIIRSRNIMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDNGT------FPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPVNTAVEELRSSAEVVDPEI----YVRNLRERILTAFEHTTKRLKAIQNSYAHPDLLEEK---FKVGEKVWMLDPRKATGD--NLKPMWKGPFEITRVISAAVYQL 1569
            ASR  ++ E NYS TE + L V++A QQFRCY++GR FTL+TDH +L  +  +K+P+ R  RW + L EF Y+  +R  G   +  DALSR  R                V  +T  +           P D  +  QE D++C  +         GN                  GLL+       +  R G  +R ++++P   +D ++   H   +  H G  +  + +R  +FW  M + +  FV  CQ  Q+ + PA         +Q P+A     ++PF+ V  D           +R ++  +D FS Y E   ++   T  + A  F+  +V RH  P   + D G       F  V + LG+K    S YHPQ NG  ER+   +  +L  +V ++   WD+ IP    A  +  H  T  TP+FLVHGR+  LP         L    E+ +P++    +V+ L+++I  A+    ++    + + A      +K   FK G+K+++ +P    G     +  W GP  +    S   Y++
Sbjct:  495 ASRQLTAPERNYSTTERELLAVVWATQQFRCYLLGRRFTLITDHSALRWMLHLKDPSARLTRWSLRLAEFTYEVIHRP-GAKHSNVDALSRATR----------------VVNVTPGE-----------PEDEWRRAQEHDTWCQEMASQTTVEKAGN------------------GLLY-------LKTREGDQSRWKVLVPVVKRDTVMNLCHSTRWSGHPGVKRTCQRIRATFFWPRMEKHIRNFVRACQICQERRTPA--------GLQVPLAEVAEVTRPFEQVSLDIVGPLPTTKAGNRYVLTIIDWFSRYAEAVPLKDQ-TAEVCARAFVEHLVLRHGAPDRILTDQGRNFTSEMFKLVCKNLGIKKLQTSAYHPQGNGLVERLHRTLVHSLACIVRKDGRDWDRWIPYTLLAYRSTPHSSTGYTPYFLVHGREPQLP---------LGCQFEIGNPDVGQEEFVQTLKQKISEAYSRAKRKDSQTREARAKTHDKGKKSRSFKTGDKIYLHEPAVPPGHARKFRRPWTGPHTVLTQTSPVNYEI 975          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A224X5T9_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X5T9_9HEMI)

HSP 1 Score: 192 bits (488), Expect = 5.390e-49
Identity = 150/540 (27.78%), Postives = 245/540 (45.37%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAGTEEKQLGIQPADISKAQQEEDSFCGPIMEYLRTPGGNKAVSGEIVHWSRHMMVEKGLLWHQYEYQGVNRRRGTRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPMASQPFQVV*CDAC------IIRSRNIMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMD------NGTFPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPVNTAVEELRSSAEVVDPEIYVRNLRERILTAFEHTT---KRLKAIQNSYAHPDLLEEKFKVGEKVWMLDPRKATGD--NLKPMWKGPFEITRVISAAVYQL 1569
            ASR  ++ E NYS TE + L V++A  QFRCY++GR FTL+TDH +L  + R+K+P+ R  RW + L EF+Y   +R  G   + ADALSR                   VAA+  +  G E          ++ AQ E D +C   ++      G                 E GL +  +   G   R G ++  ++P  L++ +L   H  A+  H G ++ ++ ++  ++W  M + +  FV  C+  Q+ K+P   +  +        AS+PF++V  D           +R ++ F+D FS Y E   ++   +    A  F+  VV RH  P   + D      +G F    + LG++    S YHPQ NG  ER+   +  +L  +V  +   WD+ +P    A  T  H  T  TP FL+HGR+ VLP   + A E    + E+   E +V ++R  +  A+  T     R +  ++   + +     F++GE V++ +P    G     +  W GP  +    S   Y+L
Sbjct:  484 ASRQLNAAERNYSTTERELLAVVWATAQFRCYLLGRRFTLITDHAALRWMLRLKDPSARLTRWALRLSEFVYDVVHRP-GVKHSNADALSRA------------------VAAVEGSPDGRE----------LALAQ-ERDEWCQAAIQEGSAKRG-----------------ESGLWYWTF---GKRDRAGWKV--LVPAKLRERILTQFHSTAWSGHPGPERTIKRIKNKFYWPKMKKHVKDFVRACRLCQERKSP---VGLQVPLTPEYRASRPFELVSLDVVGPLPLSSSGNRFLLTFIDYFSRYAEAIPIKDQ-SAEETARAFVEGVVLRHGAPQQLLTDQGRNFTSGLFRAACKLLGIRKLQTSAYHPQGNGMVERLHRTLGDSLACVVRRDGKDWDRWVPFVLMAYRTTPHSSTGFTPHFLIHGRELVLPFDCSVAAE----NPELTVQE-FVMSVRRGLEEAYRKTRGTDARTRKGRSDTFNANKKMRAFEIGEHVYLYEPAVPLGHARKFRRPWTGPHTVVAKTSPVNYEL 962          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A146M3Z2_LYGHE (RNA-directed DNA polymerase (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146M3Z2_LYGHE)

HSP 1 Score: 192 bits (487), Expect = 8.550e-49
Identity = 161/548 (29.38%), Postives = 260/548 (47.45%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAGTEEKQLGIQPADISKAQQEEDSFCGPIME--YLRTPGGNKAVSGEIVHWSRHMMVEKGLLWHQYEYQGVNRRRGTRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPMASQPFQVV*CDACI--IRS----RNIMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDNGT------FPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPV-NTAVEE-------LRSSAEVVDPEIYVRNLRER-ILTAFEHTTKRLKAIQNSYAHPDLLEEKFKVGEKVWMLDPRKATGDNLK--PMWKGPFEITRVISAAVYQL 1569
            AS+  ++ EANYSATE +   V+YA+QQFRCY+ GR FTL+TDH +L  L  +K+P+ R  RW + L E+ +K  ++  GK     D LSR+P       K+ +  E   V ++T+       K+ G          ++ED   G + E    + P   +   G  +    H   ++G+ +   E Q  N       +L++P+  ++ +++  H   +  H GRDK  + LR  Y+W  M  D+   V +C++  + K   P+  A  + +Q P   QP ++V  D     +R+    R I+  +D  + Y     ++   T   +A VF+  +V R  TP   + D GT        +V RTLGV     + YHPQ+NG  ER    +   +K       + W++ +P A  A N+  H  T  TPF+L+HG +  LPG     AV+E        R  A++V+     R L ++ +L  +E   KRL    N    P    + F+ G+ V++ +P K  G + K    W GP  +   +SA  Y++
Sbjct:  616 ASKQFNAAEANYSATERELRAVVYAVQQFRCYLYGRTFTLITDHSALRWLMSLKDPSARLTRWALRLQEYDFKVVHKP-GKRHTNVDTLSRIP-------KDAQAGEGPRVGSLTQP------KRTG----------RKEDLVWGELDEEQLQQLPRLQEQEWGNSLQGLDHKKDKRGIWYKAAERQ--NEEDPVSWRLLVPSKWREQVVRQCHAPPWHGHRGRDKTWQYLRSRYYWEGMKADVARMVRSCESCSRLKAGGPK--APIQMVQIP--GQPMELVSMDIVDPGVRTPEGYRYILTHIDHATRYAGAIPLKTQ-TAEEVARVFVKDIVLRWGTPKQLLTDQGTNFMSQLMKEVCRTLGVSQLRTTPYHPQSNGVVERFHRTLMGMVKHYTRATGSDWNRWLPYALAAYNSVEHSATGHTPFYLMHGFEMSLPGEDWAMAVDEEGMDERARRMRADLVE----ARELAQKEVLRQWEKRAKRL----NKRRPP----KTFREGDWVYLHNPVKPPGVSAKFHCPWTGPHRVLEKLSAVTYRV 1120          
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Match: A0A146L089_LYGHE (RNA-directed DNA polymerase n=5 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L089_LYGHE)

HSP 1 Score: 192 bits (487), Expect = 9.600e-49
Identity = 161/548 (29.38%), Postives = 260/548 (47.45%), Query Frame = 1
Query:    1 ASRLCSSTEANYSATELDCLGVIYALQQFRCYVMGR*FTLVTDHKSLEDLRRIKNPTGRRARWLMTLMEFMYKTQYRRRGKLMAPADALSRLPRAGAQQPKEGETDEENIVAAITRAQAGTEEKQLGIQPADISKAQQEEDSFCGPIME--YLRTPGGNKAVSGEIVHWSRHMMVEKGLLWHQYEYQGVNRRRGTRIQLVIPTALQDIMLQWAHQGAFGAHIGRDKVLEILRQGYFWVNMARDMTTFVGTCQTYQKCKNPAPQLSARTRTMQRPMASQPFQVV*CDACI--IRS----RNIMIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDNGT------FPQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKLIPLAAFACNTALHRETKETPFFLVHGRDAVLPGPV-NTAVEE-------LRSSAEVVDPEIYVRNLRER-ILTAFEHTTKRLKAIQNSYAHPDLLEEKFKVGEKVWMLDPRKATGDNLK--PMWKGPFEITRVISAAVYQL 1569
            AS+  ++ EANYSATE +   V+YA+QQFRCY+ GR FTL+TDH +L  L  +K+P+ R  RW + L E+ +K  ++  GK     D LSR+P       K+ +  E   V ++T+       K+ G          ++ED   G + E    + P   +   G  +    H   ++G+ +   E Q  N       +L++P+  ++ +++  H   +  H GRDK  + LR  Y+W  M  D+   V +C++  + K   P+  A  + +Q P   QP ++V  D     +R+    R I+  +D  + Y     ++   T   +A VF+  +V R  TP   + D GT        +V RTLGV     + YHPQ+NG  ER    +   +K       + W++ +P A  A N+  H  T  TPF+L+HG +  LPG     AV+E        R  A++V+     R L ++ +L  +E   KRL    N    P    + F+ G+ V++ +P K  G + K    W GP  +   +SA  Y++
Sbjct: 1142 ASKQFNAAEANYSATERELRAVVYAVQQFRCYLYGRTFTLITDHSALRWLMSLKDPSARLTRWALRLQEYDFKVVHKP-GKRHTNVDTLSRIP-------KDAQAGEGPRVGSLTQP------KRTG----------RKEDLVWGELDEEQLQQLPRLQEQEWGNSLQGLDHKKDKRGIWYKAAERQ--NEEDPVSWRLLVPSKWREQVVRQCHAPPWHGHRGRDKTWQYLRSRYYWEGMKADVARMVRSCESCSRLKAGGPK--APIQMVQIP--GQPMELVSMDIVDPGVRTPEGYRYILTHIDHATRYAGAIPLKTQ-TAEEVARVFVKDIVLRWGTPKQLLTDQGTNFMSQLMKEVCRTLGVSQLRTTPYHPQSNGVVERFHRTLMGMVKHYTRATGSDWNRWLPYALAAYNSVEHSATGHTPFYLMHGFEMSLPGEDWAMAVDEEGMDERARRMRADLVE----ARELAQKEVLRQWEKRAKRL----NKRRPP----KTFREGDWVYLHNPVKPPGVSAKFHCPWTGPHRVLEKLSAVTYRV 1646          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1005.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XSK1_HETAK4.300e-21186.69Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3XV63_HETAK2.990e-13680.22Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A147BAZ1_IXORI8.460e-5129.85RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixo... [more]
A0A090XF40_IXORI1.570e-5028.44RNA-directed DNA polymerase n=2 Tax=Ixodes ricinus... [more]
A0A2R5LP11_9ACAR1.950e-5029.27RNA-directed DNA polymerase (Fragment) n=1 Tax=Orn... [more]
A0A443SAU2_9ACAR2.180e-5028.33RNA-directed DNA polymerase n=1 Tax=Leptotrombidiu... [more]
A0A224XGW9_9HEMI3.030e-4927.36RNA-directed DNA polymerase (Fragment) n=1 Tax=Pan... [more]
A0A224X5T9_9HEMI5.390e-4927.78RNA-directed DNA polymerase (Fragment) n=1 Tax=Pan... [more]
A0A146M3Z2_LYGHE8.550e-4929.38RNA-directed DNA polymerase (Fragment) n=2 Tax=Lyg... [more]
A0A146L089_LYGHE9.600e-4929.38RNA-directed DNA polymerase n=5 Tax=Lygus hesperus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1005contigH-akashiwo_Contig1005:9335..11011 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7668.SPU_006979-tr
PFAMsRVT_1,rve
Model size1575
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue8.7e-23
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3AH2J@33154|Opisthokonta,3BX3Q@33208|Metazoa,3DFV7@33213|Bilateria
DescriptionDNA binding
Cds size696
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387048.0513556-CDS-H-akashiwo_Contig1005:9334..98891681387048.0513556-CDS-H-akashiwo_Contig1005:9334..9889Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1005 9335..9889 -
1681387048.0626526-CDS-H-akashiwo_Contig1005:9907..100481681387048.0626526-CDS-H-akashiwo_Contig1005:9907..10048Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1005 9908..10048 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387048.072063-UTR-H-akashiwo_Contig1005:10048..105671681387048.072063-UTR-H-akashiwo_Contig1005:10048..10567Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1005 10049..10567 -
1681387048.0816846-UTR-H-akashiwo_Contig1005:10651..110111681387048.0816846-UTR-H-akashiwo_Contig1005:10651..11011Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1005 10652..11011 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1005.1.1prot_H-akashiwo_Contig1005.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1005 9335..10048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1005.1.1

>prot_H-akashiwo_Contig1005.1.1 ID=prot_H-akashiwo_Contig1005.1.1|Name=mRNA_H-akashiwo_Contig1005.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=232bp
MIFVDQFSGYVELELMRGPITGRLLAEVFLTCVVYRHSTPAIAIMDNGTF
PQVLRTLGVKLTPVSLYHPQANGRAERMVSVIKKTLKTMVMENTTAWDKL
IPLAAFACNTALHRETKETPFFLVHGRDAVLPGPVNTAVEELRSSAEVVD
PEIYVRNLRERILTAFEHTTKRLKAIQNSYAHPDLLEEKFKVGEKVWMLD
PRKATGDNLKPMWKGPFEITRVISAAVYQLQE
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mRNA from alignment at H-akashiwo_Contig1005:9335..11011-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1005.1.1 ID=mRNA_H-akashiwo_Contig1005.1.1|Name=mRNA_H-akashiwo_Contig1005.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1677bp|location=Sequence derived from alignment at H-akashiwo_Contig1005:9335..11011- (Heterosigma akashiwo CCMP452)
GCCAGCAGATTGTGTAGCTCCACGGAGGCTAATTACAGTGCAACAGAGCT GGATTGCTTGGGGGTCATTTACGCTCTCCAACAGTTCCGTTGCTATGTAA TGGGAAGATAATTTACTCTGGTTACGGATCACAAGTCACTGGAGGACTTA AGAAGGATCAAGAACCCGACAGGGAGAAGAGCCAGATGGTTGATGACACT GATGGAGTTCATGTACAAGACCCAGTACAGAAGAAGAGGAAAGTTGATGG CGCCAGCAGATGCCCTATCAAGACTTCCAAGAGCAGGGGCTCAACAGCCG AAAGAGGGAGAGACAGATGAAGAGAACATTGTGGCAGCAATAACCAGAGC ACAGGCAGGGGTAACACAGGAACAAAAGTAGCAAACCAGGAAACGGACAA GCATGATAACAGAGGAAACAGCGCAGGACAGGATAACAGAGAAGACAGAA GAGAAACAATTGGGCATACAACCAGCAGACATTAGCAAGGCACAACAAGA AGAGGACAGTTTTTGTGGACCAATTATGGAATACCTGAGGACACCAGGAG GAAACAAGGCAGTATCAGGGGAGATTGTACATTGGAGCAGACATATGATG GTGGAGAAAGGACTACTATGGCATCAATACGAGTACCAAGGGGTTAACAG AAGAAGAGGTACAAGGATACAGTTGGTGATACCAACAGCACTACAGGATA TCATGTTACAGTGGGCACACCAAGGAGCATTCGGAGCGCATATTGGGAGA GATAAAGTATTGGAAATACTCAGACAAGGGTATTTTTGGGTAAACATGGC AAGGGACATGACAACATTTGTTGGTACTTGTCAGACATACCAGAAATGCA AGAACCCGGCACCACAGCTCAGTGCAAGGACAAGGACAATGCAGAGACCA ATGGCAAGCCAACCGTTTCAAGTTGTCTAGTGTGATGCTTGCATCATCAG GTCTAGGAACATAATGATATTTGTAGACCAGTTCTCTGGATACGTGGAAC TTGAACTTATGAGGGGTCCAATCACAGGGAGATTGTTGGCAGAAGTATTT TTGACGTGTGTAGTTTACAGGCACTCAACACCAGCCATTGCAATAATGGA CAACGTCAATTAGCAGGTCAAGGGAACATTCCCACAAGTTCTGAGAACTC TGGGAGTAAAGTTAACACCGGTTAGCTTATACCACCCCCAGGCAAATGGA AGAGCAGAGCGGATGGTGAGCGTAATCAAGAAGACACTCAAAACAATGGT GATGGAAAACACGACAGCATGGGATAAGTTGATACCATTGGCAGCGTTTG CATGCAACACAGCCCTGCACAGAGAAACAAAGGAGACACCATTTTTTCTG GTACATGGGAGAGATGCAGTTCTGCCTGGACCGGTGAACACAGCAGTGGA AGAGTTGAGGAGCAGTGCAGAAGTGGTGGACCCAGAAATTTATGTGCGGA ATCTGAGGGAAAGGATACTAACAGCATTTGAACACACCACAAAAAGACTG AAAGCTATCCAGAACTCGTATGCACACCCAGATCTGCTGGAGGAGAAGTT CAAGGTTGGAGAGAAAGTATGGATGCTGGACCCCAGGAAAGCAACCGGAG ATAACCTGAAACCAATGTGGAAGGGACCATTTGAGATCACCCGTGTGATT TCGGCTGCAGTGTACCAACTACAAGAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1005:9335..11011-

>mRNA_H-akashiwo_Contig1005.1.1 ID=mRNA_H-akashiwo_Contig1005.1.1|Name=mRNA_H-akashiwo_Contig1005.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=696bp|location=Sequence derived from alignment at H-akashiwo_Contig1005:9335..11011- (Heterosigma akashiwo CCMP452)
ATGATATTTGTAGACCAGTTCTCTGGATACGTGGAACTTGAACTTATGAG
GGGTCCAATCACAGGGAGATTGTTGGCAGAAGTATTTTTGACGTGTGTAG
TTTACAGGCACTCAACACCAGCCATTGCAATAATGGACAACGGAACATTC
CCACAAGTTCTGAGAACTCTGGGAGTAAAGTTAACACCGGTTAGCTTATA
CCACCCCCAGGCAAATGGAAGAGCAGAGCGGATGGTGAGCGTAATCAAGA
AGACACTCAAAACAATGGTGATGGAAAACACGACAGCATGGGATAAGTTG
ATACCATTGGCAGCGTTTGCATGCAACACAGCCCTGCACAGAGAAACAAA
GGAGACACCATTTTTTCTGGTACATGGGAGAGATGCAGTTCTGCCTGGAC
CGGTGAACACAGCAGTGGAAGAGTTGAGGAGCAGTGCAGAAGTGGTGGAC
CCAGAAATTTATGTGCGGAATCTGAGGGAAAGGATACTAACAGCATTTGA
ACACACCACAAAAAGACTGAAAGCTATCCAGAACTCGTATGCACACCCAG
ATCTGCTGGAGGAGAAGTTCAAGGTTGGAGAGAAAGTATGGATGCTGGAC
CCCAGGAAAGCAACCGGAGATAACCTGAAACCAATGTGGAAGGGACCATT
TGAGATCACCCGTGTGATTTCGGCTGCAGTGTACCAACTACAAGAA
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