mRNA_H-akashiwo_Contig1004.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 385 bits (989), Expect = 6.090e-133 Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 1 Query: 1 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVL*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 576 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVL AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLAL SAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE Sbjct: 150 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 341
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 177 bits (448), Expect = 6.970e-48 Identity = 85/189 (44.97%), Postives = 122/189 (64.55%), Query Frame = 1 Query: 4 PELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVL*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN 570 PE+A+++H L + +P A RYL T+ + + LGG L L A++D+DFC++R G+S +G+ +FLG +PI+WSS++Q VT +T EAEY++L +AV D+MWL+ LLE +G Q P+ EDN AC+ WAND V+K RH HVSYH KE V I + Y+ T Q+AD+ TK L+ N Sbjct: 798 PEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNN 985
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: UPI0009F3042F (uncharacterized protein LOC110102714 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F3042F) HSP 1 Score: 157 bits (396), Expect = 5.350e-44 Identity = 77/193 (39.90%), Postives = 119/193 (61.66%), Query Frame = 1 Query: 1 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGD-LVL*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 576 RP+L++ V++ + P FEA++R RYL+GT L + GD LVL ++ DSD+ D D KS TG+ FLG + + WS K Q + S+ EAEY A++S +I+WLR LL E+GC Q EPT + DN++ + AN+ + + R +H + H ++ + G+I++ YI T DQ+AD+ TKAL + F+ Sbjct: 82 RPDLSYVVNRACQQMHQPMVSDFEALKRILRYLQGTIQHGLPINGDSLVLKSYVDSDWAGDHTDRKSTTGFCNFLGTSLVSWSVKKQTTIARSSTEAEYQAIASVTMEIIWLRQLLNELGCSQIEPTKLYCDNTSAIALANNPVYHARTKHIEIDCHFIRDCIKNGSIQVHYISTQDQLADLFTKALPSTRFK 274
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: A0A507DL48_9FUNG (Uncharacterized protein n=3 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DL48_9FUNG) HSP 1 Score: 149 bits (376), Expect = 3.500e-41 Identity = 78/198 (39.39%), Postives = 123/198 (62.12%), Query Frame = 1 Query: 4 PELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV-L*AFSDSDFCNDRVDGKSVTGYILFLGDA-PIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQH-----EPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 576 P++A V L R NP P+H +A +R RYL+GT + SL +GG+ V L +SD+D+ N+ +D +S+TGY+ +G+A P+ W+SK Q V S+ EAEY+ALS A ++ +WLRSLL ++ P++ PT + EDN +C+ A + + + R +H + +H ++ V I + Y+ T + VAD LTK L A F+ Sbjct: 51 PDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSTYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFCIGNAGPVTWASKRQPTVALSSTEAEYMALSFATQETIWLRSLLRKLQIPEYLNESARPTTIYEDNQSCISLAMNPVHHARTKHIDIRHHFIRDHVD-KEIHLEYLPTAEMVADSLTKPLPAPAFK 247
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: A0A2I0W4P1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W4P1_9ASPA) HSP 1 Score: 152 bits (383), Expect = 6.120e-41 Identity = 75/192 (39.06%), Postives = 116/192 (60.42%), Query Frame = 1 Query: 1 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVL*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANF 573 RP++ + V+K + P +F+A++R RY+KGT + L L L +F DSD+ D+ D KS TGY FLG + + W K Q + S+ EAEY AL++A D++W+R LL E+GCPQ+ PT + DN++ + AN+ + + R +H V H +E + +I++ +I T DQ+ADI TKAL+ F Sbjct: 179 RPDITYAVNKACQFMHQPTDANFDALKRILRYIKGTLNIGLPLSRHSFDLSSFVDSDWTGDQKDRKSTTGYCTFLGRSLVTWCVKKQSTIARSSTEAEYRALAAAAADLIWIRQLLHELGCPQNNPTKLFCDNTSAIALANNPVFHARTKHIEVDCHYIRECIKNNSIQVHHISTKDQIADIFTKALSIVRF 370
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: UPI001F04687D (secreted RxLR effector protein 161-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04687D) HSP 1 Score: 146 bits (368), Expect = 1.130e-40 Identity = 72/194 (37.11%), Postives = 114/194 (58.76%), Query Frame = 1 Query: 1 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDL--VL*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 576 RP++A ++ L + +P HF+ V+R RY+KGT S L+ D L +SD+D+ + D +S +GY+ L ++ I WSSK Q V ST EAEY+ALS A ++++WLR LL ++G PT V EDN +E A + + R +H V+YH +E++ +++ Y + D +ADI+TK L+ F+ Sbjct: 13 RPDIAASIGVLSQFMSDPSKTHFQGVKRVLRYIKGTISYGLKFSCDKNDELHGYSDADYAGNLDDRRSTSGYVFKLANSTISWSSKKQSTVARSTTEAEYVALSQATQEVIWLRRLLSDLGSKPVSPTTVHEDNQGAIEIARNPKFHNRTKHIDVAYHFVRERILSKEVKVCYCPSKDMIADIMTKGLSKDQFQ 206
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH) HSP 1 Score: 155 bits (391), Expect = 3.520e-40 Identity = 82/194 (42.27%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 1 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLVL*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 576 RP+L F+V+ + R +P +H AV+R RY++GT ++ GG L F DSD+ D D KS +GY+ LG I W+SK Q VT ST EAE+++ S +WLR++LEE+GC Q T V DNS+ ++ + + +++ R++H HV YH +E V GTIR+ Y T DQVADI+TKA+ FE Sbjct: 1128 RPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFE 1321
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.240e-40 Identity = 77/188 (40.96%), Postives = 112/188 (59.57%), Query Frame = 1 Query: 1 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--L*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 558 RP++A V +L R NP +H++A + RYLKGT++ + GG + L A+SD+D+ +DR D +SV+G +L L AP+VW + Q V ST EAEY+AL+ VK+ MW R LL+ +G Q T + EDN + A + R +H + YH +E++ G I + YI T +QVAD LTK L Sbjct: 188 RPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB) HSP 1 Score: 145 bits (365), Expect = 8.750e-40 Identity = 70/192 (36.46%), Postives = 114/192 (59.38%), Query Frame = 1 Query: 1 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV-L*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANF 573 RP++ + V ++ R NP +H++AV+R RY++GT+ ++ G + A+SD+DF D +S TGYI + P++WSS Q ++ ST EAEY+A S A +++ WLR LL+E+ PTP+ DN + + + +K+ +H + YH +E V G I++ Y+ T +Q+ADILTKA+ F Sbjct: 52 RPDIMYAVSQVSRFLNNPGKEHWKAVKRILRYIQGTKYMGIKYSGSHIDFTAYSDADFAGDVDTRRSTTGYITLMAGGPVIWSSHRQKCISRSTTEAEYVAASDASQEVTWLRILLQELCVDLKNPTPLHMDNQSAIRLTKNTEHHKKTKHIDIKYHYIRECVEHGAIKIIYVCTEEQLADILTKAVPRDKF 243
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Match: A0A4Z0A525_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A525_9AGAM) HSP 1 Score: 146 bits (368), Expect = 1.130e-39 Identity = 75/184 (40.76%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 1 RPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGD---LVL*AFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALSSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADI 543 RP+L++ V +L + NP H+ A +R RY+KGT +L GGD V ++D+D ND +S++GY FL PI WSSK Q V ST AEYLA++ A K+ +WLRSLL E+ PQ PT + DN A + + + + + R +H + YH +E V G IR+ YI T + ADI Sbjct: 115 RPDLSYAVQRLSQFMSNPGIAHYAAAKRVLRYVKGTLDLALVYGGDDGPWVPIGYADADHANDLDSRRSISGYAFFLSGTPISWSSKKQPTVADSTAVAEYLAIAHATKEALWLRSLLGELDFPQDSPTLIHCDNQASIAMSKEQVFHARTKHVDIKYHFIREHVDRGQIRLEYIPTAENTADI 298 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1004.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1004.7.1 >prot_H-akashiwo_Contig1004.7.1 ID=prot_H-akashiwo_Contig1004.7.1|Name=mRNA_H-akashiwo_Contig1004.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=84bp MWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAback to top mRNA from alignment at H-akashiwo_Contig1004:365518..366093- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1004.7.1 ID=mRNA_H-akashiwo_Contig1004.7.1|Name=mRNA_H-akashiwo_Contig1004.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=576bp|location=Sequence derived from alignment at H-akashiwo_Contig1004:365518..366093- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1004:365518..366093- >mRNA_H-akashiwo_Contig1004.7.1 ID=mRNA_H-akashiwo_Contig1004.7.1|Name=mRNA_H-akashiwo_Contig1004.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=252bp|location=Sequence derived from alignment at H-akashiwo_Contig1004:365518..366093- (Heterosigma akashiwo CCMP452)back to top |