mRNA_H-akashiwo_Contig1003.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: UPI0010FBB0A7 (uncharacterized protein LOC114944459 n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FBB0A7) HSP 1 Score: 107 bits (268), Expect = 1.570e-27 Identity = 50/99 (50.51%), Postives = 69/99 (69.70%), Query Frame = 1 Query: 1 AGWLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRA 297 + W R+ DDT++IW H +E F +FL+ LN + I++ E+N QLPFLDVLV +N+DG+ VYRKPTH+DRYL+ TS+H K S I +L+YRA Sbjct: 30 STWFRYVDDTFVIWNHGKETFPQFLDFLNYQHRSIQFIMEIEQNNQLPFLDVLVKKNDDGTLGHRVYRKPTHTDRYLHSTSHHHPAQKNSVISSLIYRA 128
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: UPI0005F52B34 (uncharacterized protein LOC105562568 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F52B34) HSP 1 Score: 108 bits (269), Expect = 3.280e-27 Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 1 AGWLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRA 297 + W R+ DDT++IW H +E +FL +N +P I++ E+N Q+PFLDVLV RNEDG+ VYRKPTH+DRYL+ S+H K S I +LV+RA Sbjct: 30 STWFRYVDDTFVIWNHGRETLPQFLTFINSQHPNIQFTIEIEQNSQIPFLDVLVCRNEDGTLGHNVYRKPTHTDRYLHANSHHHPAQKNSVINSLVHRA 128
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: A0A6J1QJD7_9HYME (uncharacterized protein LOC112461499 n=1 Tax=Temnothorax curvispinosus TaxID=300111 RepID=A0A6J1QJD7_9HYME) HSP 1 Score: 110 bits (274), Expect = 7.390e-27 Identity = 50/99 (50.51%), Postives = 69/99 (69.70%), Query Frame = 1 Query: 1 AGWLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRA 297 + W R+ DDT++IW H ++ +FL LN +P I++ E+N Q+PFLDVLV RN+DG+ + VYRKPTH+DRYL+ TS+H K S I +LVYRA Sbjct: 30 STWFRYVDDTFVIWSHGRDTLPQFLAFLNSQHPNIQFTMEVEQNSQIPFLDVLVRRNDDGTLSHQVYRKPTHTDRYLHATSHHHPSQKNSVISSLVYRA 128
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: UPI0007383550 (uncharacterized protein LOC107037456 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007383550) HSP 1 Score: 104 bits (260), Expect = 1.330e-26 Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 1 AGWLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRA 297 A W R+ DDT++IW H + ++FLE LN +P IK+ E+NG LPFLDV V NEDG+ + VYRKPTH+DRYLN S K S I +L+YRA Sbjct: 17 AVWFRYVDDTFVIWSHGRTGLNQFLEFLNAQHPSIKFTMKIEQNGCLPFLDVSVRCNEDGTLSHQVYRKPTHTDRYLNAASRQHPSQKNSVISSLMYRA 115
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: A0A1B6E0Y0_9HEMI (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6E0Y0_9HEMI) HSP 1 Score: 106 bits (265), Expect = 2.480e-26 Identity = 48/99 (48.48%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 7 WLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRANH 303 WLR+ DD W +W H +FLE LN I+ IK+ E QLPFLD+L R DGS VYRKPTH+DRYLN +S+H K + TL+ RA H Sbjct: 32 WLRYVDDVWAVWPHGDSTLQQFLEHLNSIHRNIKFTMEIESKKQLPFLDILTTRKADGSIGHAVYRKPTHTDRYLNSSSHHHPAQKYGILNTLINRAIH 130
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: UPI0005F425C1 (uncharacterized protein LOC105566767 n=2 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F425C1) HSP 1 Score: 107 bits (266), Expect = 6.400e-26 Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 1 Query: 1 AGWLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRA 297 + W R+ DDT++IW H +E +FL +N +P I++ E+N Q+PFLDVLV RNEDG+ + VYRKPTH+DRYL+ S+H K S I +LV+RA Sbjct: 30 STWFRYVDDTFVIWNHGRETLPQFLTFINSQHPNIQFTMETEQNSQIPFLDVLVRRNEDGTLSHNVYRKPTHTDRYLHANSHHHPAQKNSIISSLVHRA 128
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: A0A401QI04_SCYTO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QI04_SCYTO) HSP 1 Score: 109 bits (273), Expect = 6.900e-26 Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 7 WLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRA 297 W R+ DDT++IW H ++ +EFL LN I+P IK+ E+NGQ+PFLDVLV RN +G+ + TVYRK TH+DRYL+ S+H K K + TL +R+ Sbjct: 308 WYRYIDDTFVIWPHGRQKLEEFLGHLNSIHPNIKFTMEIEENGQIPFLDVLVKRNAEGTLSHTVYRKTTHTDRYLHAESHHHPKQKRGILHTLAHRS 404
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: A0A8B8A3Z2_ACAPL (uncharacterized protein LOC110990868 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A3Z2_ACAPL) HSP 1 Score: 102 bits (254), Expect = 7.960e-26 Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 7 WLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLV 288 WLR+ DDT++IW+H Q+ FLE LNG++ I++ E+NG + FLDV V R EDGS TVY KPTH+DRYL+ TS + K K S R LV Sbjct: 21 WLRYVDDTFVIWQHGQDNLQLFLEHLNGLHSSIQFTMEQERNGNISFLDVEVTRKEDGSLARTVYHKPTHTDRYLHSTSFYHPKIKSSANRALV 114
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: UPI0005F3F8F4 (uncharacterized protein LOC105556235 n=3 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F3F8F4) HSP 1 Score: 107 bits (268), Expect = 9.870e-26 Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 1 Query: 1 AGWLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRA 297 + W R+ DDT++IW H +E +FL +N +P I++ E+N Q+PFLDVLV RNEDG+ + VYRKPTH+DRYL+ S+H K S I +LV+RA Sbjct: 106 STWFRYVDDTFVIWNHGRETLPQFLTFINSQHPNIQFTMESEQNSQIPFLDVLVRRNEDGTLSHNVYRKPTHTDRYLHANSHHHPAPKYSVISSLVHRA 204
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Match: UPI0014552671 (uncharacterized protein LOC117305532 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014552671) HSP 1 Score: 103 bits (257), Expect = 1.450e-25 Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 7 WLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTTTVYRKPTHSDRYLNWTSNHPVKDKLSGIRTLVYRAN 300 WLR+ DDT++IW H E D+FL +N +P I++ E + LPFLDVL+ + DGS +VYRKPTH+DRYLN S HP K S RTL+ RA+ Sbjct: 32 WLRYVDDTFIIWSHGLENLDDFLSHINRQHPNIQFTMETETSDSLPFLDVLISKKTDGSLAHSVYRKPTHTDRYLNARSFHPPSVKASVNRTLLQRAH 129 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1003.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1003.3.1 >prot_H-akashiwo_Contig1003.3.1 ID=prot_H-akashiwo_Contig1003.3.1|Name=mRNA_H-akashiwo_Contig1003.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=102bp AGWLRFRDDTWMIWEHSQELFDEFLEKLNGINPKIKWEAVFEKNGQLPFLback to top mRNA from alignment at H-akashiwo_Contig1003:144610..144915+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1003.3.1 ID=mRNA_H-akashiwo_Contig1003.3.1|Name=mRNA_H-akashiwo_Contig1003.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=306bp|location=Sequence derived from alignment at H-akashiwo_Contig1003:144610..144915+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1003:144610..144915+ >mRNA_H-akashiwo_Contig1003.3.1 ID=mRNA_H-akashiwo_Contig1003.3.1|Name=mRNA_H-akashiwo_Contig1003.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=306bp|location=Sequence derived from alignment at H-akashiwo_Contig1003:144610..144915+ (Heterosigma akashiwo CCMP452)back to top |