mRNA_H-akashiwo_Contig1002.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A7S1U4W5_9STRA (Peptide deformylase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4W5_9STRA) HSP 1 Score: 255 bits (651), Expect = 1.030e-83 Identity = 126/179 (70.39%), Postives = 148/179 (82.68%), Query Frame = 1 Query: 19 EEVDPGEVAG--LRIVRYPHPALRAKNEEITEFDDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLEEEAKQEVQARLDELVAEF 549 +EVDPG+V G LRIV+YPHPALRA+N E+ FD++LK S+ MFK+MYAAQGVGLAAPQV N RLMV+NPEGD +KWL E VLVNP IVERSE ++E EGCLSFP M G V+R KWIKV+ Q+LKGK KKK+ GWEARIFQHEYDHL+GVVYPDRL+ + K+ VQ RLDELVA+F Sbjct: 23 DEVDPGKVDGTDLRIVKYPHPALRAENAEVEAFDEDLKKFSREMFKVMYAAQGVGLAAPQVGVNKRLMVYNPEGDARKWLAEVVLVNPRIVERSEAVDEESEGCLSFPDMDGKVERNKWIKVEAQNLKGKKLKKKFTGWEARIFQHEYDHLDGVVYPDRLDAKEKKRVQERLDELVADF 201
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A6U1C522_9STRA (Peptide deformylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1C522_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.060e-79 Identity = 119/179 (66.48%), Postives = 148/179 (82.68%), Query Frame = 1 Query: 13 VDEEVDPGEVAGLRIVRYPHPALRAKNEEITEFDDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLEEEAKQEVQARLDELVAEF 549 ++EE+DPG V+GL I++YP P LRA N EIT FDD LKALS+ MF LMYAAQGVGLAAPQV N RLMV+N GD KKW+ E VLVNP+I++R+ G ++E EGCLSFPGM GPV+RA WI+V+ Q+LKG+ KKK+ G+EARIFQHEYDHL+GVVY D L+++A++ VQ RL+ELVAEF Sbjct: 70 LEEEIDPGVVSGLSIIKYPDPRLRADNAEITVFDDNLKALSRKMFDLMYAAQGVGLAAPQVGINKRLMVYNEFGDPKKWVSEIVLVNPQIIDRAAGNDEETEGCLSFPGMNGPVKRAPWIQVQAQNLKGRKFKKKFRGFEARIFQHEYDHLDGVVYIDHLDDQAREAVQPRLEELVAEF 248
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A7S0E2U1_9CRYP (Peptide deformylase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2U1_9CRYP) HSP 1 Score: 243 bits (620), Expect = 6.290e-78 Identity = 120/181 (66.30%), Postives = 147/181 (81.22%), Query Frame = 1 Query: 4 SETVDEEVDPGEVAG--LRIVRYPHPALRAKNEEITEFDDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLE-EEAKQEVQARLDEL 537 +ET++EEVDPGE+ G LR+++YPHP LRA +EE+TEFDD L+ K MF +MYA++GVGLAAPQV N R+MVFNPEGD+KKWL E L+NP+IVE SEG + E E CLSFPGM+G V+R KWIK++ QDLKGK KKKY GW AR+FQHEYDHLEG+VY DRLE EE +Q V+ +LDEL Sbjct: 83 TETMEEEVDPGEIEGTDLRVLKYPHPKLRAPDEEVTEFDDNLRKTIKEMFLVMYASRGVGLAAPQVGINKRIMVFNPEGDKKKWLQEIALINPKIVEMSEGTDVENEACLSFPGMQGKVRRHKWIKIEAQDLKGKPIKKKYTGWTARVFQHEYDHLEGIVYIDRLEDEEDRQAVKPKLDEL 263
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A7S1ZGE7_TRICV (Peptide deformylase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZGE7_TRICV) HSP 1 Score: 240 bits (613), Expect = 1.710e-77 Identity = 123/182 (67.58%), Postives = 145/182 (79.67%), Query Frame = 1 Query: 19 EEVDPGEVAG--LRIVRYPHPALRAKNEEITE---FDDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLEEEAKQEVQARLDELVAEF 549 EEVDPG V G LRIV+YPHP+LRA N EITE D +K ++K MF +MYAA+GVGLAAPQV N RLMV+N GD+ KWL E V+VNP IVE S+ Q+ E EGCLSFP M GPVQR+KWIKV+ +LKGK KKK+ GWEARIFQHEYDHL+GVVY DRLEE++K+EVQ RLDEL+A+F Sbjct: 51 EEVDPGIVDGTDLRIVKYPHPSLRADNAEITEDELADGSIKKIAKEMFLVMYAAEGVGLAAPQVGINKRLMVYNESGDKNKWLSEVVMVNPRIVEFSDAQDVETEGCLSFPEMNGPVQRSKWIKVEALNLKGKKTKKKFKGWEARIFQHEYDHLDGVVYVDRLEEDSKKEVQPRLDELIADF 232
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A7S4PNI0_GUITH (Peptide deformylase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PNI0_GUITH) HSP 1 Score: 241 bits (616), Expect = 2.240e-77 Identity = 119/181 (65.75%), Postives = 147/181 (81.22%), Query Frame = 1 Query: 4 SETVDEEVDPGEVAG--LRIVRYPHPALRAKNEEITEFDDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLE-EEAKQEVQARLDEL 537 +E ++EEVDPGE+ G LR+++YPHP LRA +EE+TEFDD L+ K MF +MYA++GVGLAAPQV N R+MVFNPEGD+KKWL E L+NP+IVE SEG + E E CLSFPGM+G V+R KWIK++ QDLKGK+ KKK+ GW AR+FQHEYDHLEGVVY DRLE EE +Q V+ +LDEL Sbjct: 79 AEPMEEEVDPGEIEGTDLRVLKYPHPKLRAPDEEVTEFDDNLRKTIKEMFLVMYASRGVGLAAPQVGINKRIMVFNPEGDKKKWLQEIALINPKIVEMSEGTDVETEACLSFPGMQGKVRRHKWIKIEAQDLKGKTIKKKFTGWTARVFQHEYDHLEGVVYIDRLEDEEDRQTVKPKLDEL 259
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A6H5KJW5_9PHAE (Peptide deformylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW5_9PHAE) HSP 1 Score: 238 bits (606), Expect = 6.480e-76 Identity = 115/179 (64.25%), Postives = 141/179 (78.77%), Query Frame = 1 Query: 13 VDEEVDPGEVAGLRIVRYPHPALRAKNEEITEFDDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLEEEAKQEVQARLDELVAEF 549 ++EEVDPGEVAGLRI++YPHPALRA+NEEI FDD+LK L+++MFK+MYAA+GVGLAAPQV N RLMVFNPEGD K WL E +LVNP+IV +G+ EGCLSFPGM G V+R W+KV+ + KGK KKKY W ARIFQHEYDHL+G VY D L +++VQ LD+LV++F Sbjct: 91 MEEEVDPGEVAGLRILKYPHPALRAENEEIEVFDDDLKKLARDMFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGKITAEEGCLSFPGMEGKVERRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPSEREKVQPVLDKLVSDF 269
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A7S3V6U4_9STRA (Peptide deformylase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6U4_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.780e-75 Identity = 121/187 (64.71%), Postives = 147/187 (78.61%), Query Frame = 1 Query: 19 EEVDPGEVAG--LRIVRYPHPALRAKNEEITEFD---DELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLEEEAKQEVQARLDELVAEF-EGAE 561 EEVDPG V G LR+++YPHP+LRA N EITE + E+ ++K MF +MYA QGVGLAAPQV N ++MV+N GD+KKWL ETV+VNP+IV+ SEG++ E EGCLSFPGM G VQR+KWIKV+ Q+LKGK KKK+ GWEARIFQHEYDHL+G +YPDRL +E K V+ RLDELV EF EG E Sbjct: 54 EEVDPGVVEGTDLRVLKYPHPSLRAANAEITEEELKSGEISKIAKEMFLVMYATQGVGLAAPQVGINKKMMVYNETGDKKKWLKETVMVNPKIVDFSEGKDVESEGCLSFPGMNGDVQRSKWIKVEAQNLKGKKMKKKFKGWEARIFQHEYDHLDGTLYPDRLTDEGKDLVKQRLDELVTEFGEGGE 240
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A8J6CDU3_DIALT (Peptide deformylase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDU3_DIALT) HSP 1 Score: 235 bits (600), Expect = 2.020e-75 Identity = 116/175 (66.29%), Postives = 137/175 (78.29%), Query Frame = 1 Query: 19 EEVDPGEVAGLRIVRYPHPALRAKNEEITEFDDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLEEEAKQEVQARLDELVA 543 EEVDPGEVAGLR+++YPHP LRA N E++ FDDEL+ LS+ MF++MYA++GVGLAAPQV N RL+VFNPEGDE+K E VLVNP IVER+EG E + EGCLSFPG V RAKW+KVK +LKGK KKY GWEARIFQHEYDHL+G +Y DRL+ + VQ LD LVA Sbjct: 63 EEVDPGEVAGLRVLKYPHPQLRAPNAEVSTFDDELRDLSRRMFRMMYASKGVGLAAPQVGVNKRLLVFNPEGDERKMSAECVLVNPTIVERAEGTELDDEGCLSFPGFGAKVTRAKWVKVKALNLKGKPFTKKYAGWEARIFQHEYDHLDGTLYVDRLDAGERSAVQPELDRLVA 237
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A7S1GJC1_CYCTE (Peptide deformylase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJC1_CYCTE) HSP 1 Score: 232 bits (591), Expect = 4.540e-74 Identity = 118/183 (64.48%), Postives = 143/183 (78.14%), Query Frame = 1 Query: 16 DEEVDPGEVAG--LRIVRYPHPALRAKNEEITEF---DDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLEEEAKQEVQARLDELVAEF 549 ++EVDPG+V G L+IV+YPHPALRA+NEEITE D + L+K MF +MYAA+GVGLAAPQV N RLMV+NP GD KKWL E VLVNP IV+ S+G + E+EGCLSFP M G VQR+KWIKV+ KG+ KKK+ GWEARIFQHEYDHL+GVVY DRL E+ + +VQ RLDEL+ +F Sbjct: 56 EKEVDPGKVEGTDLQIVKYPHPALRAENEEITEEELQDGTIAKLAKEMFLVMYAAEGVGLAAPQVGVNKRLMVYNPSGDSKKWLDEVVLVNPRIVQLSDGTDVEIEGCLSFPDMNGDVQRSKWIKVEALTPKGRKVKKKFNGWEARIFQHEYDHLDGVVYIDRLSEKGRSDVQPRLDELIQDF 238
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Match: A0A7R9W3J9_9STRA (Peptide deformylase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3J9_9STRA) HSP 1 Score: 231 bits (589), Expect = 9.740e-74 Identity = 117/182 (64.29%), Postives = 140/182 (76.92%), Query Frame = 1 Query: 19 EEVDPGEVAG--LRIVRYPHPALRAKNEEITE---FDDELKALSKNMFKLMYAAQGVGLAAPQVAKNVRLMVFNPEGDEKKWLFETVLVNPEIVERSEGQEQEVEGCLSFPGMRGPVQRAKWIKVKYQDLKGKSKKKKYVGWEARIFQHEYDHLEGVVYPDRLEEEAKQEVQARLDELVAEF 549 EEVDPG V G LR+++YPHP+LR +N E++ D + ++K MF +MYAA+GVGLAAPQV N RLMV+N GD KKWL E VLVNP+IVE S+G + EGCLSFPGM GPVQR+KWIKV+ Q LKGK KKKY GWEARIFQHEYDHL+G+ Y DRL E+A++ VQ RLDELV EF Sbjct: 59 EEVDPGVVDGTDLRVLKYPHPSLRKENSEVSAEEIADGSIAKIAKEMFLVMYAAEGVGLAAPQVGINKRLMVYNEHGDAKKWLSEVVLVNPKIVEFSDGTDTATEGCLSFPGMDGPVQRSKWIKVEAQSLKGKKIKKKYKGWEARIFQHEYDHLDGITYIDRLSEDARETVQPRLDELVEEF 240 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1002.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1002.2.1 >prot_H-akashiwo_Contig1002.2.1 ID=prot_H-akashiwo_Contig1002.2.1|Name=mRNA_H-akashiwo_Contig1002.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=191bp MSETVDEEVDPGEVAGLRIVRYPHPALRAKNEEITEFDDELKALSKNMFKback to top mRNA from alignment at H-akashiwo_Contig1002:99556..100128- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1002.2.1 ID=mRNA_H-akashiwo_Contig1002.2.1|Name=mRNA_H-akashiwo_Contig1002.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=573bp|location=Sequence derived from alignment at H-akashiwo_Contig1002:99556..100128- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1002:99556..100128- >mRNA_H-akashiwo_Contig1002.2.1 ID=mRNA_H-akashiwo_Contig1002.2.1|Name=mRNA_H-akashiwo_Contig1002.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=573bp|location=Sequence derived from alignment at H-akashiwo_Contig1002:99556..100128- (Heterosigma akashiwo CCMP452)back to top |