mRNA_H-akashiwo_Contig10.39.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig10.39.1
Unique NamemRNA_H-akashiwo_Contig10.39.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: H3GAU9_PHYRM (DNA helicase n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3GAU9_PHYRM)

HSP 1 Score: 529 bits (1362), Expect = 3.340e-176
Identity = 283/486 (58.23%), Postives = 336/486 (69.14%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELL--------------------------------------------------GK--------------------VAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADR-ANLQQLLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF+ L +KPDH+ RPVWVCPNGRIFLEAF+P+YKQAYDFLVAI+EPV+RPEF+HEYKLTPYSLYAAV+VAI T SIL VL+RLSKNRLP+ +  F++D TL YGKAKLVL  N +YVES +   L++LL                                                  GK                    V QVK+A L +DYP MEE DFR D   P L +DLKPTT+IR Y+EKSLSKMFGNGRARSGIIVLPCGAGKTLTGV AAST++KS L L TSAVSVEQW  QFK+W +I +K   +FT+  K+ + P+ G++ TTY M+AFGG+R+  S+ V++ I+ REWG ++L       AKMFR+VI + + H KLGLTATLVREDDLIGDLNFLIGPKLY+ANWMDLTQSGFLANV C+EVWCPMA  FYREYLR  + A  + LLY ANP KF  AEFL  +HE+RGDKI
Sbjct:   83 DFSTLDMKPDHEARPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVAIETESILKVLERLSKNRLPEGIVAFIKDCTLSYGKAKLVLHHNEFYVESLYPEVLRKLLEHEHIRAARVKETAADVAANASAAAPPDQANMQYQKLLNEDYNVADEHHPGKSSGGQQKTVRTVSFKIRKTMVEQVKRACLDLDYPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPEKKIARFTSVAKDYIDPESGVIVTTYTMVAFGGRRARASEEVMQLIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMAGEFYREYLREGKSARKRALLYVANPNKFTAAEFLIQYHEERGDKI 568          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: A0A835Z0I6_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I6_9STRA)

HSP 1 Score: 515 bits (1326), Expect = 1.860e-171
Identity = 277/497 (55.73%), Postives = 329/497 (66.20%), Query Frame = 1
Query:   16 LPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELLG---------------------------------------------------------------KVAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRAD-RANLQQLLYCANPTKFRTAEFLKAHHEQRGDKINIHCLLRQCMYPENVLRASRYT 1293
            + LK DH++RP+WVCP+G IFLEA  P+Y QAYDFLVAIAEPVARPEFVHEY+LTP+SLYAAVAVAI T SI+ VL+RLSK  +P+ V  F+RD T R GKAKLVLKR RYYVES H   L+ LL                                                                +V  VK+AAL+MDYP MEE DFR D  NP LP+ LKP TKIR Y+EKSL KMFGNGRARSGIIVLPCGAGKTLTGV AASTV+KSTLVL TS VSV QW+ QF+LW DI +K+   FT+D K+ ++P   +L TTY+M++F G+R+   + +I QIR REWGLM+L       A MFR+V+  C+AH KLGLTATLVREDDLI DLNFLIGPKLY+ANWMDLT  G+LANVQC+E WCPM   FYREYL        ++LLY  NP KFRT EFL  +H++RGDKI         ++ +NV    RY+
Sbjct:    1 MALKRDHEKRPLWVCPDGHIFLEAHTPLYTQAYDFLVAIAEPVARPEFVHEYRLTPFSLYAAVAVAIDTESIIRVLNRLSKVEVPEGVNTFIRDHTQRCGKAKLVLKRGRYYVESPHPDVLRALLKDREIETARIKGDDEEEGEAGGEFIQSEAAQEMDANLEFKQLAAEAEGGGDDDDQVMHFKVSSEQVEAVKRAALSMDYPLMEEYDFRHDVTNPNLPMQLKPNTKIRQYQEKSLRKMFGNGRARSGIIVLPCGAGKTLTGVTAASTVKKSTLVLCTSGVSVIQWKYQFQLWTDIPEKNIACFTSDTKDAINPDACVLITTYSMLSFSGRRAADVELIINQIRNREWGLMLLDEVHVVPATMFRKVLNICNAHCKLGLTATLVREDDLISDLNFLIGPKLYEANWMDLTAGGYLANVQCVEAWCPMTAEFYREYLNESINHRKKELLYVTNPNKFRTCEFLVQYHQERGDKI--------ILFADNVFALRRYS 489          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: B8C0Y9_THAPS (DNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0Y9_THAPS)

HSP 1 Score: 509 bits (1311), Expect = 8.150e-171
Identity = 273/485 (56.29%), Postives = 328/485 (67.63%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELL-------GKVAQ---------------------------------------------------------------VKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADRANLQQLLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF+ L LK DH  RP W CP+G I+LEAF+ +Y +AYDFLVAI+EPVARPE++HEYKLTPYSLYAAVA  I T SI+ VL+R SKN LPD VA F+R+ T RYGKAKLVLK N++YVES H A L+ELL        +VA+                                                               VK+ A+ +DYP MEE DFR D  NP +P+DLKP T+IR Y+E+SLSKMFGNGRARSGIIVLPCGAGKTLTGV AA T++KS + L T+AVSV QW+ QFKLW +I D++ C FT+DKKE+++P   +L TTY MI++GG+RS +S  V+  IR REWGL+++       AKMFRRVI +  AH +LGLTATLVREDDLI DLNFLIGPKLY+ANWMDLT  G+LANVQC+EVW PM   F REYL AD A L+QLLY  NP+K R AEFL   HE+RGDKI
Sbjct:    1 DFSDLTLKSDHISRPCWTCPDGTIYLEAFHDLYTKAYDFLVAISEPVARPEYLHEYKLTPYSLYAAVATNIETESIVKVLNRFSKNVLPDGVAAFIRECTKRYGKAKLVLKHNKFYVESEHPAVLRELLRDDLISQARVAEDVNPDDATGGVGGTSNADGFVVHTKAEEMEENLHDDEEGGSKSSKLQAKTTVSFQIKGESVEVVKRRAIDLDYPLMEEYDFRNDKVNPDVPMDLKPHTRIRRYQERSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAAQTIKKSVVCLCTNAVSVLQWKYQFKLWTNIPDENICVFTSDKKEDINPGGCVLITTYTMISYGGQRSDKSAEVMNIIRSREWGLLLMDEVHVVPAKMFRRVIGSVKAHCRLGLTATLVREDDLISDLNFLIGPKLYEANWMDLTTQGYLANVQCVEVWTPMTGPFMREYLMADNARLKQLLYVMNPSKLRAAEFLMRFHEERGDKI 485          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: A0A0W8DPC8_PHYNI (DNA helicase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DPC8_PHYNI)

HSP 1 Score: 518 bits (1335), Expect = 1.070e-170
Identity = 283/509 (55.60%), Postives = 335/509 (65.82%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELL-------------------------------------------------------------------------GK--------------------VAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADR-ANLQQLLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF+ L +KPDH+ RPVWVCPNGRIFLEAF+P+YKQAYDFLVAI+EPV+RPEF+HEYKLTPYSLYAAV+VAI T SIL VL+RLSKNRLP+ +  F++D TL YGKAKLVL  N +YVES +   L++LL                                                                         GK                    V QVK+A L +DYP MEE DFR D   P L +DLKPTT+IR Y+EKSLSKMFGNGRARSGIIVLPCGAGKTLTGV AAST++KS L L TSAVSVEQW  QFK+W +I +K   +FT+  K+ + P  G++ TTY M+AFGG+R+  S+ V++ I+ REWG ++L       AKMFR+VI + + H KLGLTATLVREDDLIGDLNFLIGPKLY+ANWMDLTQSGFLANV C+EVWCPMA  FYREYLR  + A  + LLY ANP KF  AEFL  +HE+RGDKI
Sbjct:   83 DFSTLDMKPDHEARPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVAIETESILKVLERLSKNRLPEGIVAFIKDCTLSYGKAKLVLHHNEFYVESLYPEVLRKLLEHEHIRAARVKETAEDIAANASSTTAPPVAPGGTRPEDSNEFIQKDVSAEDQANLQYQRLLNEDYNVADENHPGKTSGDQQKTVRTVSFKIRKTMVEQVKRACLDLDYPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPEKKIARFTSVAKDYIDPDSGVIVTTYTMVAFGGRRARASEEVMQLIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMAGEFYREYLRETKSARKRALLYVANPNKFTAAEFLIQYHEERGDKI 591          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: K3WMY8_GLOUD (DNA helicase n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WMY8_GLOUD)

HSP 1 Score: 515 bits (1326), Expect = 1.830e-170
Identity = 280/504 (55.56%), Postives = 330/504 (65.48%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELL----------------------------------------------------------------------------------------GKVAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADR-ANLQQLLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF+ L +K DH+ RPVWVCPNGRIFLEAF+P+YKQAYDFLVAI+EPV+RPEF+HEYKLTPYSLYAAV+V+I T SIL VL+RLSKN LP+ +  F+RD TL YGKAKLVL  N +YVES +   L++LL                                                                                          V  VK+A L MDYP MEE DFR D   P + +DLKPTT+IR Y+EKSLSKMFGNGRARSGIIVLPCGAGKTLTGV AAST++KS L L TSAVSVEQW  QFK+W +I +K   +FT+  K+ + P  G++ TTY M+AFGGKR+  S+ V++ I+ REWG ++L       AKMFR+VI + + H KLGLTATLVREDDLIGDLNFLIGPKLY+ANWMDLTQSGFLANV C+EVWCPMA  FYREYLR  + A  + LLY ANP KF  AEFL  +HEQRGDKI
Sbjct:   88 DFSTLNMKKDHESRPVWVCPNGRIFLEAFSPIYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVSIETESILKVLERLSKNHLPEVIVNFIRDCTLSYGKAKLVLHHNEFYVESLYPDVLRKLLEHDQIRAARVKETTTDADPALAPPAPGGPRPEDTEFIQKDVSAEDQANLQYQKLLNEDYEVSEDHVQPGGTASNAQKTVRTVSFKIRKNMVEHVKRACLDMDYPLMEEYDFRNDKTIPDIEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPEKKIARFTSVAKDFIDPTSGVIVTTYTMVAFGGKRAKASEEVMQLIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMAGEFYREYLRETKSARRRALLYVANPNKFTAAEFLIQYHEQRGDKI 591          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: A0A5D6XVJ4_9STRA (DNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVJ4_9STRA)

HSP 1 Score: 513 bits (1320), Expect = 2.540e-169
Identity = 284/519 (54.72%), Postives = 328/519 (63.20%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELL-------------------------------------------------------------------------------------------------------GKVAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADR-ANLQQLLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF+ L +K DH  RPVWVCPNGRIFLEAF+P+YKQAYDFLVAIAEPV+RPEF+HEYKLTPYSLYAAV+V+I T SIL VL+RLSKN LPD +  F+RD TL YGKAKLVL  N +YVES +   L++LL                                                                                                         V QVK+A L MDYP MEE DFR D   P L +DLKPTT+IR Y+EKSLSKMFGNGRARSGIIVLPCGAGKTLTGV AAST++KS L L TSAVSVEQW  QFK+W  I DK   +FT+  K+ + P  G++ TTY M+AFGGKR+  S+ V++ I+ REWG ++L       AKMFR+VI + + H KLGLTATLVREDDLIGDLNFLIGPKLY+ANWMDLTQSGFLANV C+EVWCPM   FYREYLR  + A  + LLY ANP KF  AEFL  +HEQRGDKI
Sbjct:   91 DFSSLSMKKDHAARPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFLHEYKLTPYSLYAAVSVSIETESILKVLERLSKNHLPDVIVGFVRDCTLSYGKAKLVLHHNEFYVESLYPDVLRKLLEHDQIRAARVKDDTSAASTTASAGAGAPAAPGALAGRADDAEFIQKDVSAEDQANLQYQKLLNEDYEVADEHVQGSGGASGGGGPSANGPQKTVRTVSFQIRKSMVEQVKRACLDMDYPLMEEYDFRNDKTIPDLEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTTIPDKKIARFTSVAKDFIDPTSGVIVTTYTMVAFGGKRARASEEVMQLIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGEFYREYLRESKSARKRALLYVANPNKFTAAEFLIQYHEQRGDKI 609          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: A0A024GP60_9STRA (DNA helicase n=3 Tax=Albugo TaxID=65356 RepID=A0A024GP60_9STRA)

HSP 1 Score: 511 bits (1316), Expect = 4.710e-169
Identity = 275/498 (55.22%), Postives = 327/498 (65.66%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELLGK----------------------------------------------------------------------------------VAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADR-ANLQQLLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF  L +KPDH  RPVWVCPNGRIFLEAF+P+YKQAYDFLVAIAEPV+RPEF+HEYKLTPYSLYAAV+V+I T S+L VL+RLSKN LP  + +F++D T+ YGKAKLVL  N +YVES +   L++LL                                                                                    V  VK+A L +DYP MEE DFR D   P + +DLKPTT+IR Y+EKSLSKMFGNGRARSGIIVLPCGAGKTLTGV AAST++KS L L TSAVSVEQW  QFK+W +I +    +FT+  K+ + P  G++ TTY MIAFGGKR+  S+ V++ I+ REWG ++L       AKMFR+VI + + H KLGLTATLVREDDLIGDLNFLIGPKLY+ANWMDLTQSGFLANV C+EVWCPM   FYREYL+  + A  + LLY ANP KF  AEFL  +HE+RGDKI
Sbjct:   83 DFANLQMKPDHASRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFLHEYKLTPYSLYAAVSVSIETESVLKVLERLSKNHLPTVITQFIQDCTVSYGKAKLVLHHNEFYVESLYPEVLQKLLSHEPIRLARMRETEVPTAEGTKSTTMNDEGFIEKEVMAEDQANLQYQKLLNEDFDAEEEQRITSKGGTAPKTVRTVSVKIRKSMVEDVKRACLDLDYPLMEEYDFRNDKTIPDIEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTSQFKMWTNIPESKIARFTSVAKDYIDPNSGVIVTTYTMIAFGGKRARASEEVMQLIQGREWGCLLLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGEFYREYLKESKNARKRALLYVANPNKFTAAEFLIQYHEKRGDKI 580          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: A0A1E7FWQ3_9STRA (DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWQ3_9STRA)

HSP 1 Score: 505 bits (1301), Expect = 2.200e-168
Identity = 268/477 (56.18%), Postives = 321/477 (67.30%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELLG-------------------------------------------------------------KVAQVKQAALAMDYPPMEECDFRRDAHNPALPV-DLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADRANLQQLLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF+ L LKPDH +RP WVCP+G I+LEAF+ +Y++AYDFLVAIAEPVARPEFVH+YKLTPYSLYAAVA  I T SI+ VL RLSKN LP  V +F+RD T +YGKAKLVLK N++YVES     L+ELL                                                              KV  VK+ A+ +DYP MEE DFR D  NP +P+ DLKP T+IR Y+E+SL+KMFGNGRARSGIIVLPCGAGKTLTGV AA T++KS + L T+AVSV QW+ QF+ W +I D     FT+D+K+++HP   +L TTY MI++ GKRS QSQ+V++QI  REWG +++       AKMFRRVI +  AH +LGLTATLVREDDLI DLNFLIGPKLY+ANWMDLT  G+LANVQC+EVWCPM   F +EYL A  A L+QLLY  NP K R  EFL   HE RGDKI
Sbjct:   16 DFSDLALKPDHIQRPCWVCPDGNIYLEAFHDLYEKAYDFLVAIAEPVARPEFVHQYKLTPYSLYAAVATNIETESIITVLQRLSKNALPKEVKQFVRDCTSKYGKAKLVLKHNKFYVESEFPMVLRELLRDQTIAQARIHEDVEANVDEHGFLTQTKAEEMKENLDMLREPGDGKKQKKPKVVVSFQVDGVKVENVKRQAIELDYPLMEEYDFRNDNINPNVPLFDLKPITRIRRYQERSLAKMFGNGRARSGIIVLPCGAGKTLTGVTAAQTIKKSCVCLATNAVSVLQWKHQFQKWTNIPDDRIAVFTSDQKDKLHPDACVLITTYTMISYNGKRSEQSQKVMDQITGREWGCLLMDEVHVVPAKMFRRVIGSVKAHTRLGLTATLVREDDLISDLNFLIGPKLYEANWMDLTAQGYLANVQCVEVWCPMTGPFMKEYLLASNARLKQLLYVMNPAKLRAVEFLVRFHEARGDKI 492          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: A0A067BZ91_SAPPC (DNA helicase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BZ91_SAPPC)

HSP 1 Score: 506 bits (1303), Expect = 2.860e-167
Identity = 275/498 (55.22%), Postives = 326/498 (65.46%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELLGK----------------------------------------------------------------------------------VAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRAD-RANLQQLLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF+ L LK DH+ RPVWVCPNGRIFLEAF+P+YKQAYDFLVAIAEPV+RPEFVHEYKLTPYSLYAAV+V+I T SI+ VL+RLSKN +P  +  F+RD TL YGKAKLVL  N +YVES +   L+ LL                                                                                    V QVK+A L MDYP MEE DFR D   P + +DLKPTT+IR Y+EKSLSKMFGNGRARSGIIVLPCGAGKTLTGV AAST++KS L L TSAVSVEQW  QFK+W  I +K   +FT+ +K+ + P+ G++ TTY M+AFGG R+ +S  V+  I+ REWG ++L       AKMFR+VI + + H KLGLTATLVREDDLIGDLNFLIGPKLY+ANWMDLTQSGFLANV C+E+WCPM   FY EYL+ +  A  + LLY ANP KF  AE+L  +HE+RGDKI
Sbjct:   77 DFSALELKKDHESRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFVHEYKLTPYSLYAAVSVSIETDSIIKVLERLSKNVIPTGITTFIRDCTLSYGKAKLVLHHNEFYVESLYPQVLRTLLENEQIRLARVKEDPTDTSTATAMTSNEFSSNGEFLQKEVTAEDQANMQYQKLLMEDYDQTAEGSAKSTSAATVQTVSFRIRKTHVEQVKRACLDMDYPLMEEYDFRNDKTIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTTIPEKKIARFTSVEKDYIDPESGVIVTTYTMVAFGGNRAAKSAAVMALIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEIWCPMTGPFYAEYLKENVSARKRALLYVANPNKFSAAEYLIQYHEKRGDKI 574          
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Match: A0A1V9Z626_9STRA (DNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z626_9STRA)

HSP 1 Score: 503 bits (1295), Expect = 4.140e-166
Identity = 274/498 (55.02%), Postives = 324/498 (65.06%), Query Frame = 1
Query:    4 DFTQLPLKPDHDRRPVWVCPNGRIFLEAFNPMYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLDRLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELLGK----------------------------------------------------------------------------------VAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSKMFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQQFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQRVIEQIRKREWGLMIL-------AKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNFLIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADRANLQQ-LLYCANPTKFRTAEFLKAHHEQRGDKI 1227
            DF+ L +K DH  RPVWVCPNGRIFLEAF+P+YKQAYDFLVAIAEPV+RPEF+HEYKLTPYSLYAAV+V+I T SI+ VLDRLSKN+LP+ + +F+R+ T  YGKAKLVL  N +YVES     L++LL                                                                                    V QVK+A L MDYP MEE DFR D   P + +DLKPTT+IR Y+EKSLSKMFGNGRARSGIIVLPCGAGKTLTGV AAST++KS L L TSAVSVEQW  QFK+W +I  K   +FT+  K+E+    G++ TTY M+AFGG RS  S   ++ I+ REWG ++L       AKMFR+VI + + H KLGLTATLVREDDLIGDLNFLIGPKLY+ANWMDLTQSGFLANV C+EVWCPM   FY EYL+ +    Q+ LLY ANP KF  AE+L  +HE+RGDKI
Sbjct:   74 DFSSLNMKKDHASRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFIHEYKLTPYSLYAAVSVSIETDSIIKVLDRLSKNQLPECIIKFIRECTTSYGKAKLVLHHNEFYVESLFPEVLRKLLENEQIRLARVKEDTETSTSAAALNMTEFTSNGEFLQKEVSAEDQANLQYQKLLMEDYDQTTDNAAKATTASTVQTVSFRIRKTHVEQVKRACLDMDYPLMEEYDFRNDKTIPDIEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPSKKIARFTSVSKDEIDKDSGVIVTTYTMVAFGGARSSASAEAMKIIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGPFYSEYLKDNNTARQRALLYVANPNKFSAAEYLIRYHEERGDKI 571          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig10.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GAU9_PHYRM3.340e-17658.23DNA helicase n=26 Tax=Peronosporaceae TaxID=4777 R... [more]
A0A835Z0I6_9STRA1.860e-17155.73DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
B8C0Y9_THAPS8.150e-17156.29DNA helicase (Fragment) n=1 Tax=Thalassiosira pseu... [more]
A0A0W8DPC8_PHYNI1.070e-17055.60DNA helicase n=1 Tax=Phytophthora nicotianae TaxID... [more]
K3WMY8_GLOUD1.830e-17055.56DNA helicase n=3 Tax=Pythiaceae TaxID=4782 RepID=K... [more]
A0A5D6XVJ4_9STRA2.540e-16954.72DNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]
A0A024GP60_9STRA4.710e-16955.22DNA helicase n=3 Tax=Albugo TaxID=65356 RepID=A0A0... [more]
A0A1E7FWQ3_9STRA2.200e-16856.18DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A067BZ91_SAPPC2.860e-16755.22DNA helicase n=3 Tax=Saprolegniaceae TaxID=4764 Re... [more]
A0A1V9Z626_9STRA4.140e-16655.02DNA helicase n=1 Tax=Thraustotheca clavata TaxID=7... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig10contigH-akashiwo_Contig10:2151110..2152982 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog164328.Phyra72320
PFAMsERCC3_RAD25_C,Helicase_C_3,ResIII
Model size1873
Max annot lvl4776|Peronosporales
KEGG koko:K10843
KEGG Pathwayko03022,ko03420,map03022,map03420
KEGG ModuleM00290
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.52e-156
EggNOG OGsCOG1061@1|root,KOG1123@2759|Eukaryota,3Q89Q@4776|Peronosporales
EC3.6.4.12
DescriptionERCC3/RAD25/XPB C-terminal helicase
Cds size1434
COG categoryKL
BRITEko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387043.236873-UTR-H-akashiwo_Contig10:2151109..21512051681387043.236873-UTR-H-akashiwo_Contig10:2151109..2151205Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig10 2151110..2151205 +
1681387043.2647202-UTR-H-akashiwo_Contig10:2152639..21529821681387043.2647202-UTR-H-akashiwo_Contig10:2152639..2152982Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig10 2152640..2152982 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387043.2487671-CDS-H-akashiwo_Contig10:2151205..21526391681387043.2487671-CDS-H-akashiwo_Contig10:2151205..2152639Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig10 2151206..2152639 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig10.39.1prot_H-akashiwo_Contig10.39.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig10 2151206..2152639 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig10.39.1

>prot_H-akashiwo_Contig10.39.1 ID=prot_H-akashiwo_Contig10.39.1|Name=mRNA_H-akashiwo_Contig10.39.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=478bp
MYKQAYDFLVAIAEPVARPEFVHEYKLTPYSLYAAVAVAIATASILAVLD
RLSKNRLPDRVARFLRDRTLRYGKAKLVLKRNRYYVESAHAAALKELLGK
VAQVKQAALAMDYPPMEECDFRRDAHNPALPVDLKPTTKIRVYREKSLSK
MFGNGRARSGIIVLPCGAGKTLTGVAAASTVRKSTLVLTTSAVSVEQWRQ
QFKLWCDIDDKHTCQFTADKKEEMHPKVGILCTTYNMIAFGGKRSHQSQR
VIEQIRKREWGLMILAKMFRRVIETCSAHAKLGLTATLVREDDLIGDLNF
LIGPKLYDANWMDLTQSGFLANVQCIEVWCPMALAFYREYLRADRANLQQ
LLYCANPTKFRTAEFLKAHHEQRGDKINIHCLLRQCMYPENVLRASRYTL
HLWGNNRKGAAGAAGRLPGGPFGELHRPQQGGRRGHRHPGRQRHHTGLLA
LRGAAPGGAAAGAHPPAEAEPGGGRRV*
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mRNA from alignment at H-akashiwo_Contig10:2151110..2152982+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig10.39.1 ID=mRNA_H-akashiwo_Contig10.39.1|Name=mRNA_H-akashiwo_Contig10.39.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1873bp|location=Sequence derived from alignment at H-akashiwo_Contig10:2151110..2152982+ (Heterosigma akashiwo CCMP452)
CAGGATTTCACACAGTTACCTCTGAAACCTGACCATGATCGCCGGCCTGT TTGGGTTTGTCCAAATGGCAGGATATTCCTTGAAGCATTCAACCCAATGT ACAAACAGGCCTATGATTTTCTGGTTGCTATCGCTGAGCCAGTTGCTCGC CCGGAATTCGTTCACGAGTACAAGCTGACGCCATACAGCCTGTACGCGGC GGTGGCGGTGGCCATCGCCACGGCCTCGATCCTGGCCGTGCTCGACCGCC TCAGCAAGAACCGCCTGCCCGACCGGGTCGCGCGCTTCCTCCGCGACCGC ACGCTCCGGTACGGCAAGGCCAAGCTGGTGCTGAAGAGGAACAGGTACTA CGTGGAGTCCGCCCACGCCGCGGCCCTCAAGGAGCTGCTGGGCAAGGTGG CGCAGGTGAAGCAGGCGGCGCTGGCCATGGACTACCCGCCGATGGAGGAG TGCGACTTCCGCCGCGACGCGCACAACCCCGCGCTGCCCGTCGACCTCAA GCCCACCACCAAGATCCGCGTCTACcgGGAGAAGAGCCTGTCCAAAATGT TCGGCAACGGcCGGGCGCGCTCGGGCATCATCGTGCTGCCCTGCGGCGcC GGGAAGACCCTGACGGGCGTGGCGGCCGCCTCCACCGTGCGCAAGAGCAC CCTGGTGCTCACCACCAGCGCCGTCAGCGTGGAGCAGTGGCGCCAGCAGT TCAAGCTGTGGTGCGACATTGATGACAAGCACACATGCCAGTTTACCGCG GACAAAAAAGAGGAGATGCATCCGAAAGTGGGAATACTCTGCACAACGTA TAACATGATTGCTTTTGGGGGCAAGCGGTCGCACCAGTCGCAGCGGGTGA TCGAGCAGATCCGGAAACGCGAGTGGGGCCTGATGATCCTGGCCAAGATG TTCCGCAGGGTGATCGAGACCTGCAGCGCGCACGCCAAGCTCGGGCTGAC CGCGACCCTGGTGCGCGAAGACGACCTCATCGGGGACCTGAACTTCCTCA TCGGGCCAAAGCTCTACGACGCCAACTGGATGGATCTGACTCAGTCGGGG TTCCTAGCAAACGTCCAATGCATCGAGGTCTGGTGCCCGATGGCGCTGGC CTTCTACCGGGAGTACCTGCGGGCGGACCGGGCCAACCTGCAGCAGCTGC TGTACTGCGCCAACCCCACCAAGTTCCGCACCGCCGAGTTCCTCAAGGCC CACCACGAGCAGCGGGGTGACAAGATAAACATACATTGTCTTCTCAGACA ATGTATGTATCCTGAAAATGTACTCAGAGCGTCTAGGTATACCTTACATT TATGGGGCAACAACAGAAAAGGAGCGGCAGGAGCGGCTGGACGCCTTCCG GGTGGACCCTTCGGTGAACTGCATCGGCCTCAGCAAGGTGGGCGACGTGG CCATCGACATCCCGGACGCCAACGTCATCATACAGGTCTCCTCGCACTTC GGGGCGCGGCGCCAGGAGGCGCAGCGGCTGGGGCGCATCCTCCGGCCGAA GCAGAGCCAGGGGGCGGACGGCGGGTTTAACGCGTTCTTCTACACGCTGG TGAGCACGGACACCCAGGAGATGTTCTACAGCACCAAGCGCCAGCAGTAC CTCGTGGACCAGGGCTACACGTTCAAGGTTGTGGATGATTTGACTGAAGT CATGAAAGAATCCATGCACCAGAGCGAGGTTGGAACCCCAGCAGAGGAGA AGGCATGGCTAGAACAGGTGCTGCGGGCGGACGCGGCGGCGGACGGGCAG GAGGAGGAGGAGGCCGCGCTGGGCCGCGACCAGGACCACCCGGCCGAGAC ACGCAAGCACGCCGCGGGGGGGGGGCGGCGCACCGGCGCCTTGATCggGA AGCTCTCCGGCGCGGGGGGCGCG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig10:2151110..2152982+

>mRNA_H-akashiwo_Contig10.39.1 ID=mRNA_H-akashiwo_Contig10.39.1|Name=mRNA_H-akashiwo_Contig10.39.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1434bp|location=Sequence derived from alignment at H-akashiwo_Contig10:2151110..2152982+ (Heterosigma akashiwo CCMP452)
ATGTACAAACAGGCCTATGATTTTCTGGTTGCTATCGCTGAGCCAGTTGC
TCGCCCGGAATTCGTTCACGAGTACAAGCTGACGCCATACAGCCTGTACG
CGGCGGTGGCGGTGGCCATCGCCACGGCCTCGATCCTGGCCGTGCTCGAC
CGCCTCAGCAAGAACCGCCTGCCCGACCGGGTCGCGCGCTTCCTCCGCGA
CCGCACGCTCCGGTACGGCAAGGCCAAGCTGGTGCTGAAGAGGAACAGGT
ACTACGTGGAGTCCGCCCACGCCGCGGCCCTCAAGGAGCTGCTGGGCAAG
GTGGCGCAGGTGAAGCAGGCGGCGCTGGCCATGGACTACCCGCCGATGGA
GGAGTGCGACTTCCGCCGCGACGCGCACAACCCCGCGCTGCCCGTCGACC
TCAAGCCCACCACCAAGATCCGCGTCTACcgGGAGAAGAGCCTGTCCAAA
ATGTTCGGCAACGGcCGGGCGCGCTCGGGCATCATCGTGCTGCCCTGCGG
CGcCGGGAAGACCCTGACGGGCGTGGCGGCCGCCTCCACCGTGCGCAAGA
GCACCCTGGTGCTCACCACCAGCGCCGTCAGCGTGGAGCAGTGGCGCCAG
CAGTTCAAGCTGTGGTGCGACATTGATGACAAGCACACATGCCAGTTTAC
CGCGGACAAAAAAGAGGAGATGCATCCGAAAGTGGGAATACTCTGCACAA
CGTATAACATGATTGCTTTTGGGGGCAAGCGGTCGCACCAGTCGCAGCGG
GTGATCGAGCAGATCCGGAAACGCGAGTGGGGCCTGATGATCCTGGCCAA
GATGTTCCGCAGGGTGATCGAGACCTGCAGCGCGCACGCCAAGCTCGGGC
TGACCGCGACCCTGGTGCGCGAAGACGACCTCATCGGGGACCTGAACTTC
CTCATCGGGCCAAAGCTCTACGACGCCAACTGGATGGATCTGACTCAGTC
GGGGTTCCTAGCAAACGTCCAATGCATCGAGGTCTGGTGCCCGATGGCGC
TGGCCTTCTACCGGGAGTACCTGCGGGCGGACCGGGCCAACCTGCAGCAG
CTGCTGTACTGCGCCAACCCCACCAAGTTCCGCACCGCCGAGTTCCTCAA
GGCCCACCACGAGCAGCGGGGTGACAAGATAAACATACATTGTCTTCTCA
GACAATGTATGTATCCTGAAAATGTACTCAGAGCGTCTAGGTATACCTTA
CATTTATGGGGCAACAACAGAAAAGGAGCGGCAGGAGCGGCTGGACGCCT
TCCGGGTGGACCCTTCGGTGAACTGCATCGGCCTCAGCAAGGTGGGCGAC
GTGGCCATCGACATCCCGGACGCCAACGTCATCATACAGGTCTCCTCGCA
CTTCGGGGCGCGGCGCCAGGAGGCGCAGCGGCTGGGGCGCATCCTCCGGC
CGAAGCAGAGCCAGGGGGCGGACGGCGGGTTTAA
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