mRNA_H-akashiwo_Contig10.36.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A7M3SW75_9MICC (Hsp20 family protein n=1 Tax=Rothia koreensis TaxID=592378 RepID=A0A7M3SW75_9MICC) HSP 1 Score: 61.2 bits (147), Expect = 2.860e-8 Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 64 QQFEDDPQLRNAQIMGVDIWETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERTAELYR-SFRVPQGADYEKIDACLQNGVLELTI 387 Q F L + +M +D W F I++D+PGVS E + VD+++N I+TV A+R D D + +ER ++R + QG D +I A QNGVL LTI Sbjct: 17 QFFGSQGTLAHPTMMPMDAWRDEDQFHIELDLPGVSAESIDVDVEQN--ILTVEARR-----DGPDDSRELTTAERPRGVFRRQLSLGQGLDTSRIQATYQNGVLSLTI 118
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A8I2FYW8_9BACT (Hsp20 family protein n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A8I2FYW8_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 4.120e-8 Identity = 37/114 (32.46%), Postives = 72/114 (63.16%), Query Frame = 1 Query: 55 DTLQQFEDDPQLRNAQIMGVDIWETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSER-TAELYRSFRVPQGADYEKIDACLQNGVLELTIQK 393 D+ +Q ED+ ++ + DI++T + +KI+VPG++ +D+ +++ N I++V +R ++ + D + +ER + + YR+FR+P+ D +KIDA L++GVLEL + K Sbjct: 26 DSEKQSEDESRV--SWYPAADIYDTKDNYVLKIEVPGLTKKDVNIEVKDN--ILSVKGERKEEKDEKKDGYHR---TERLSGKFYRAFRLPKNVDAKKIDATLKDGVLELKVAK 132
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A5J9SXA8_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9SXA8_9POAL) HSP 1 Score: 62.0 bits (149), Expect = 4.580e-8 Identity = 36/105 (34.29%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 124 ETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERTA-ELYRSFRVPQGADYEKIDACLQNGVLELTIQKDKNTERGARRTIKV 435 ET I +DVPGV ED++V++++N+ ++ V+ +R D+ + ++ER A +R FR+P GAD +++ A L+NGVL +T+ K +R R I + Sbjct: 77 ETPEAHVIAVDVPGVRREDVKVEVEENSRVLRVSGERRA--DDAEKDGERWHRAERAAGRFWRRFRMPAGADVDRVSARLENGVLTVTVPKVAEHQRREPRVISI 179
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A2E0Y7E7_9GAMM (Heat-shock protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0Y7E7_9GAMM) HSP 1 Score: 60.1 bits (144), Expect = 7.120e-8 Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 79 DPQLRNAQIMGVDIWETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERTAELYRSFRVPQGADYEKIDACLQNGVLELTIQKDKNTERGARRTIKVRS 441 +P R + VDI ET + ++I +++P V+ ED VD+ ++TV+ +R + D + R + RSFR+P+ AD E+IDA +++GVL L + K ++ R I+V + Sbjct: 25 EPLARGDWLPPVDISETATEYRIDVEIPSVAAED--VDVSFKDGVLTVSGERRTERSSDEDGGKRHRVERRWGKFTRSFRLPENADAERIDARVKDGVLYLVVGKQ---DKAQPRRIEVNA 140
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A1N7KY49_9GAMM (Heat shock protein Hsp20 n=5 Tax=Oceanospirillales TaxID=135619 RepID=A0A1N7KY49_9GAMM) HSP 1 Score: 60.1 bits (144), Expect = 7.120e-8 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 1 Query: 112 VDIWETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERT-AELYRSFRVPQGADYEKIDACLQNGVLELTIQKDKNTERGARRTI 429 VD+ + + I D+PGVS ED+ VDID V+ K +K+ DS+ + + SER + RSF +PQ D E+ A ++GVL+LT+ K E R TI Sbjct: 38 VDVTDAGENYLIHADIPGVSKEDIHVDIDG----AQVSIKAEIKQKDSTSDDQRVLHSERYYGSVSRSFELPQDVDIERSAAEYKDGVLQLTLPKKVQQESQRRLTI 140
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A2H0JTA9_9BACT (Heat-shock protein n=1 Tax=Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 TaxID=1973924 RepID=A0A2H0JTA9_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 7.880e-8 Identity = 40/123 (32.52%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 70 FEDDPQLRNAQIMGVDIWETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERTA-ELYRSFRVPQGADYEKIDACLQNGVLELTIQKDKNTERGARRTIKV 435 F++D + +D+ ET + +++DVPGVS +D+Q+++ ++TV+ +R +E +D+ ++ ER A +RSFR+P+ + +KI+A +NGVL +T+ K E R IKV Sbjct: 31 FDEDADQNVSWTPHLDVLETEDAYVLEMDVPGVSRDDIQINLQDG--VLTVSGERASREVSENDNV---VRVERHAGRFFRSFRLPKKINEQKIEARHENGVLMVTLPK---VEESKPRKIKV 145
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A804MUG9_MAIZE (SHSP domain-containing protein n=6 Tax=Andropogoneae TaxID=147429 RepID=A0A804MUG9_MAIZE) HSP 1 Score: 61.2 bits (147), Expect = 9.120e-8 Identity = 34/91 (37.36%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 124 ETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERTA-ELYRSFRVPQGADYEKIDACLQNGVLELTIQK 393 ET I +DVPGV ED++V++++N+ ++ V+ +R E D + ++ER A +R FR+P GAD +++ A L+NGVL +T+ K Sbjct: 92 ETPDAHVISVDVPGVRREDVKVEVEENSRVLRVSGERRADEEKEGD---RWHRAERAAGRFWRRFRMPAGADVDRVSARLENGVLTVTVPK 179
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A523LK55_9GAMM (Hsp20/alpha crystallin family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523LK55_9GAMM) HSP 1 Score: 59.3 bits (142), Expect = 1.280e-7 Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 49 FFDTLQQFEDDPQLRNAQIMGVDIWETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERT-AELYRSFRVPQGADYEKIDACLQNGVLELTIQKDKNTERGARRTIKV 435 FF + ++ D R+ VDI ET ++I +++P VS +D+ V I ++T++ +R HD + K + ER R+F++P+ AD E I+A ++GVL + I K E+ RTIKV Sbjct: 15 FFARVTRYPSDSHTRSVWSPPVDISETEVDYRINLEIPAVSADDVNVTIKDG--VLTISGER----HDEQEDSHKNHRLERRYGRFTRTFKLPENADEESINASSKDGVLYVVIAK---REKETPRTIKV 135
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A1E5V891_9POAL (21.9 kDa heat shock protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5V891_9POAL) HSP 1 Score: 60.5 bits (145), Expect = 1.540e-7 Identity = 34/91 (37.36%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 124 ETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERTA-ELYRSFRVPQGADYEKIDACLQNGVLELTIQK 393 ET I +DVPGV ED++V++++N+ ++ V+ +R E + + ++ER A +R FR+P GAD E++ A L+NGVL +T+ K Sbjct: 88 ETPDAHVISVDVPGVRREDVKVEVEENSRVLRVSGERRADEEKDGE---RWHRAERAAGRFWRRFRMPAGADVERVTARLENGVLTVTVPK 175
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Match: A0A0S8F2F1_9DELT (SHSP domain-containing protein n=1 Tax=Myxococcales bacterium SG8_38_1 TaxID=1703408 RepID=A0A0S8F2F1_9DELT) HSP 1 Score: 58.9 bits (141), Expect = 1.810e-7 Identity = 35/101 (34.65%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 91 RNAQIMGVDIWETNSYFKIKIDVPGVSTEDLQVDIDKNAEIMTVAAKRTVKEHDSSDSPAKKIQSERTAELYRSFRVPQGADYEKIDACLQNGVLELTIQK 393 + A + VDI E + F + +VPG+S ED++VD++KN ++T++ +R + E + S+ ++++ + RSF +P+ D E I A L++GVLEL + K Sbjct: 27 KQALRVAVDIREEDDAFYVDAEVPGLSAEDVKVDVEKN--VLTLSGERKI-EKEESEGTFRRVERQ-YGSFTRSFSLPETVDTESISADLKDGVLELRLPK 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig10.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig10.36.1 >prot_H-akashiwo_Contig10.36.1 ID=prot_H-akashiwo_Contig10.36.1|Name=mRNA_H-akashiwo_Contig10.36.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=145bp MIWPFLPRKSIFFDTLQQFEDDPQLRNAQIMGVDIWETNSYFKIKIDVPGback to top mRNA from alignment at H-akashiwo_Contig10:1987285..1988358+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig10.36.1 ID=mRNA_H-akashiwo_Contig10.36.1|Name=mRNA_H-akashiwo_Contig10.36.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1074bp|location=Sequence derived from alignment at H-akashiwo_Contig10:1987285..1988358+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig10:1987285..1988358+ >mRNA_H-akashiwo_Contig10.36.1 ID=mRNA_H-akashiwo_Contig10.36.1|Name=mRNA_H-akashiwo_Contig10.36.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=435bp|location=Sequence derived from alignment at H-akashiwo_Contig10:1987285..1988358+ (Heterosigma akashiwo CCMP452)back to top |