mRNA_H-akashiwo_Contig10.24.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: A0A7S4DHC9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHC9_HETAK) HSP 1 Score: 462 bits (1189), Expect = 2.580e-163 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1 Query: 1 FPISSPTTISKTPNCMHTIISSFSRSGSYYDTTLPKKQHQCGPIDDTESCSDDSFCSHGNPSVPAGGDIGDPRVAWQSLSRRSDASGIWFDDGLECWICFCPVDSCDSQGRPNGCKVHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPVLAFEQKVLALESRWAAVQKDDAHQFVFYSCFHCQEPFFGGLKRCQAADA 639 FPISSPTTISKTPNCMHTIISSFSRSGSYYDTTLPKKQHQCGPIDDTESCSDDSFCSHGNPSVPAGGDIGDPRVAWQSLSRRSDASGIWFDDGLECWICFCPVDSCDSQGRPNGCKVHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPVLAFEQKVLALESRWAAVQKDDAHQFVFYSCFHCQEPFFGGLKRCQAADA Sbjct: 3 FPISSPTTISKTPNCMHTIISSFSRSGSYYDTTLPKKQHQCGPIDDTESCSDDSFCSHGNPSVPAGGDIGDPRVAWQSLSRRSDASGIWFDDGLECWICFCPVDSCDSQGRPNGCKVHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPVLAFEQKVLALESRWAAVQKDDAHQFVFYSCFHCQEPFFGGLKRCQAADA 215
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: A0A7S1KSY5_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KSY5_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 5.270e-9 Identity = 34/111 (30.63%), Postives = 50/111 (45.05%), Query Frame = 1 Query: 352 HPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPVL----AFEQKVLALESRWAAVQKDD----------------AHQFVFYSCFHCQEPFFGGLKRC 624 H H CLK +I+ G +I FGFL C +C+ + L M P L + E+K L + DD H F +Y C+ C+EP+FGG+++C Sbjct: 350 HIFHFACLKRKIQAGYPGARITFGFLKCPLCQELMQHPLLDQLMEPHLRLKKSLEEKALQRLEYQNLHKSDDIIKEGGKFYNKSLEYAVHNFAYYPCYECKEPYFGGMRQC 460
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: A0A3B4ANP4_9GOBI (RING-type domain-containing protein n=5 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4ANP4_9GOBI) HSP 1 Score: 62.4 bits (150), Expect = 7.590e-8 Identity = 32/114 (28.07%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 349 VHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPV--------------LAFE--QKVLALESRWAAVQKDDA----HQFVFYSCFHCQEPFFGGLKRCQA 630 H H++C + +E P+I FGF+ C +C+N+++ + LKD + P+ L +E K A+ + A D A +++ +Y C+ C++ +FGG RC A Sbjct: 266 THVFHLQCTRRVLENRWLGPRITFGFMQCPICKNKINHSVLKDLLDPIKELYEDVRRKALMRLEYEGLHKSEAITTPGARFHNDPAGFAMNRYAYYVCYKCKKAYFGGEARCDA 379
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: UPI000A1C3CFE (E3 ubiquitin-protein ligase MYCBP2 n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C3CFE) HSP 1 Score: 62.4 bits (150), Expect = 1.010e-7 Identity = 32/114 (28.07%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 349 VHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPV--------------LAFE--QKVLALESRWAAVQKDDA----HQFVFYSCFHCQEPFFGGLKRCQA 630 H H++C + +E P+I FGF+ C +C+N+++ + LKD + P+ L +E K A+ + A D A +++ +Y C+ C++ +FGG RC A Sbjct: 4344 THVFHLQCTRRVLENRWLGPRITFGFMQCPICKNKINHSVLKDLLDPIKELYEDVRRKALMRLEYEGLHKSEAITTPGARFHNDPAGFAMNRYAYYVCYKCKKAYFGGEARCDA 4457
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: UPI00145A430C (E3 ubiquitin-protein ligase MYCBP2 isoform X9 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145A430C) HSP 1 Score: 62.4 bits (150), Expect = 1.010e-7 Identity = 32/114 (28.07%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 349 VHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPV--------------LAFE--QKVLALESRWAAVQKDDA----HQFVFYSCFHCQEPFFGGLKRCQA 630 H H++C + +E P+I FGF+ C +C+N+++ + LKD + P+ L +E K A+ + A D A +++ +Y C+ C++ +FGG RC A Sbjct: 4417 THVFHLQCTRRVLENRWLGPRITFGFMQCPICKNKINHSVLKDLLDPIKELYEDVRRKALMRLEYEGLHKSEAITTPGARFHNDPAGFAMNRYAYYVCYKCKKAYFGGEARCDA 4530
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: UPI00145A26A7 (E3 ubiquitin-protein ligase MYCBP2 isoform X8 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145A26A7) HSP 1 Score: 62.4 bits (150), Expect = 1.010e-7 Identity = 32/114 (28.07%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 349 VHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPV--------------LAFE--QKVLALESRWAAVQKDDA----HQFVFYSCFHCQEPFFGGLKRCQA 630 H H++C + +E P+I FGF+ C +C+N+++ + LKD + P+ L +E K A+ + A D A +++ +Y C+ C++ +FGG RC A Sbjct: 4429 THVFHLQCTRRVLENRWLGPRITFGFMQCPICKNKINHSVLKDLLDPIKELYEDVRRKALMRLEYEGLHKSEAITTPGARFHNDPAGFAMNRYAYYVCYKCKKAYFGGEARCDA 4542
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: UPI00145BE9F9 (E3 ubiquitin-protein ligase MYCBP2 isoform X7 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145BE9F9) HSP 1 Score: 62.4 bits (150), Expect = 1.010e-7 Identity = 32/114 (28.07%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 349 VHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPV--------------LAFE--QKVLALESRWAAVQKDDA----HQFVFYSCFHCQEPFFGGLKRCQA 630 H H++C + +E P+I FGF+ C +C+N+++ + LKD + P+ L +E K A+ + A D A +++ +Y C+ C++ +FGG RC A Sbjct: 4430 THVFHLQCTRRVLENRWLGPRITFGFMQCPICKNKINHSVLKDLLDPIKELYEDVRRKALMRLEYEGLHKSEAITTPGARFHNDPAGFAMNRYAYYVCYKCKKAYFGGEARCDA 4543
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: UPI00145A3DA3 (E3 ubiquitin-protein ligase MYCBP2 isoform X6 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145A3DA3) HSP 1 Score: 62.4 bits (150), Expect = 1.010e-7 Identity = 32/114 (28.07%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 349 VHPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRPV--------------LAFE--QKVLALESRWAAVQKDDA----HQFVFYSCFHCQEPFFGGLKRCQA 630 H H++C + +E P+I FGF+ C +C+N+++ + LKD + P+ L +E K A+ + A D A +++ +Y C+ C++ +FGG RC A Sbjct: 4431 THVFHLQCTRRVLENRWLGPRITFGFMQCPICKNKINHSVLKDLLDPIKELYEDVRRKALMRLEYEGLHKSEAITTPGARFHNDPAGFAMNRYAYYVCYKCKKAYFGGEARCDA 4544
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Match: A0A6A7G0X9_9CRUS (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G0X9_9CRUS) HSP 1 Score: 54.7 bits (130), Expect = 3.400e-5 Identity = 33/116 (28.45%), Postives = 52/116 (44.83%), Query Frame = 1 Query: 352 HPAHIECLKHRIEVGRKDPKIGFGFLDCGVCRNRLDLAPLKDFMRP-------VLAFEQKVLALES---------RWAAVQKDD----AHQFVFYSCFHCQEPFFGGLKRCQAADA 639 H H +C++ +I +I FGFL C +C + L ++ VL +K L +E R KD +F FY CF C++P+FGG+++C+ A A Sbjct: 463 HIFHFQCIRAKIAKKWSGARIIFGFLKCPLCGQFISSPSLAQELKTNTKLHQIVLQKARKRLEIEGLQNDPRITDRTGKYYKDPDSFAMDRFAFYMCFKCEQPYFGGMRKCEDAQA 578 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig10.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig10.24.1 >prot_H-akashiwo_Contig10.24.1 ID=prot_H-akashiwo_Contig10.24.1|Name=mRNA_H-akashiwo_Contig10.24.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=213bp FPISSPTTISKTPNCMHTIISSFSRSGSYYDTTLPKKQHQCGPIDDTESCback to top mRNA from alignment at H-akashiwo_Contig10:1555349..1555987+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig10.24.1 ID=mRNA_H-akashiwo_Contig10.24.1|Name=mRNA_H-akashiwo_Contig10.24.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=639bp|location=Sequence derived from alignment at H-akashiwo_Contig10:1555349..1555987+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig10:1555349..1555987+ >mRNA_H-akashiwo_Contig10.24.1 ID=mRNA_H-akashiwo_Contig10.24.1|Name=mRNA_H-akashiwo_Contig10.24.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=639bp|location=Sequence derived from alignment at H-akashiwo_Contig10:1555349..1555987+ (Heterosigma akashiwo CCMP452)back to top |