mRNA_H-akashiwo_Contig10.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig10.1.1
Unique NamemRNA_H-akashiwo_Contig10.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig10.1.1 vs. uniprot
Match: A0A6V1V5J4_HETAK (Tafazzin family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V5J4_HETAK)

HSP 1 Score: 130 bits (328), Expect = 5.140e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 
Query:    1 RVLNKTKVHNYKTLEKLMLERDEGVGLFTYSNHHSMLDDPGLPALFMPWHSXXXXXXXXNLCNTDMYFV 207
            RVLNKTKVHNYKTLEKLMLERDEGVGLFTYSNHHSMLDDPGLPALFMPWHSXXXXXXXXNLCNTDMYFV
Sbjct:  123 RVLNKTKVHNYKTLEKLMLERDEGVGLFTYSNHHSMLDDPGLPALFMPWHSXXXXXXXXNLCNTDMYFV 191
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BLAST of mRNA_H-akashiwo_Contig10.1.1 vs. uniprot
Match: A0A0D2LY10_9CHLO (Tafazzin family protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LY10_9CHLO)

HSP 1 Score: 52.8 bits (125), Expect = 1.210e-6
Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 1 
Query:   49 LMLERDEGVGLFTYSNHHSMLDDPGLPALFMPW 147
            L ++R+EG+GL TYSNH S  DDPGLP+  +PW
Sbjct:   61 LTMQREEGIGLLTYSNHTSTFDDPGLPSALLPW 93
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig10.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6V1V5J4_HETAK5.140e-35100.00Tafazzin family protein n=1 Tax=Heterosigma akashi... [more]
A0A0D2LY10_9CHLO1.210e-660.61Tafazzin family protein n=1 Tax=Monoraphidium negl... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig10contigH-akashiwo_Contig10:47849..49624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7159.AAEL001564-PA
Preferred nameTAZ
PFAMsAcyltransferase
Model size210
Max annot lvl33208|Metazoa
KEGG rclassRC00004,RC00037
KEGG koko:K13511
KEGG ReactionR09037
KEGG Pathwayko00564,map00564
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0002376,GO:0002520,GO:0003006,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006936,GO:0006941,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0007507,GO:0007517,GO:0007519,GO:0008015,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009653,GO:0009888,GO:0009987,GO:0010257,GO:0014706,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022900,GO:0022904,GO:0030097,GO:0030154,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032048,GO:0032049,GO:0032501,GO:0032502,GO:0032504,GO:0032576,GO:0032577,GO:0032981,GO:0033108,GO:0034622,GO:0034641,GO:0035965,GO:0042171,GO:0042407,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045333,GO:0046034,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0047184,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048534,GO:0048609,GO:0048646,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0051704,GO:0055086,GO:0055114,GO:0060047,GO:0060048,GO:0060537,GO:0060538,GO:0061024,GO:0061061,GO:0065003,GO:0071617,GO:0071704,GO:0071840,GO:0072359,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901564,GO:1901576
Exons2
Evalue5.53e-07
EggNOG OGsKOG2847@1|root,KOG2847@2759|Eukaryota,38FYN@33154|Opisthokonta,3BCQT@33208|Metazoa,3CWXC@33213|Bilateria,41XUS@6656|Arthropoda,3SFNB@50557|Insecta,44YF5@7147|Diptera,45FU9@7148|Nematocera
DescriptionPhosphate acyltransferases
Cds size210
COG categoryI
BRITEko00000,ko00001,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387042.5025895-CDS-H-akashiwo_Contig10:47848..479881681387042.5025895-CDS-H-akashiwo_Contig10:47848..47988Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig10 47849..47988 -
1681387042.5149937-CDS-H-akashiwo_Contig10:49554..496241681387042.5149937-CDS-H-akashiwo_Contig10:49554..49624Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig10 49555..49624 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig10.1.1prot_H-akashiwo_Contig10.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig10 47849..49624 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig10.1.1

>prot_H-akashiwo_Contig10.1.1 ID=prot_H-akashiwo_Contig10.1.1|Name=mRNA_H-akashiwo_Contig10.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=70bp
RVLNKTKVHNYKTLEKLMLERDEGVGLFTYSNHHSMLDDPGLPALFMPWH
SMPWRKMRWNLCNTDMYFV*
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mRNA from alignment at H-akashiwo_Contig10:47849..49624-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig10.1.1 ID=mRNA_H-akashiwo_Contig10.1.1|Name=mRNA_H-akashiwo_Contig10.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1776bp|location=Sequence derived from alignment at H-akashiwo_Contig10:47849..49624- (Heterosigma akashiwo CCMP452)
AGGGTGCTGAATAAAACCAAGGTCCACAACTACAAAACCCTGGAGAAGCT
GATGCTGGAGCGGGATGAAGGTGAAAAATAAGCCAGGCTTGCACCAAGTG
GCCGTCACGATTAACGGGGGTATTTTGCGGCGAAATTCCCCGAAAATAAA
AAATTGTGTTGTATACTTCGCAGTTGCGGGAATGCAGTTTTTGAGTTGTA
ATGTTTTTTTCCCGTGAACAAGTTCAATCGCGAACCATGGAATCACTAAA
TTCCACGGAACTATCATCAACGACAACGACAATAATTCTATAACAACCCC
CACAACAACATCGACAAAGACCATAACAACAACGACCAAATCCTCCAACT
GCTGCTTACTGATCCTGCTTGCTGCTTGTTGCTGGTGAGCAGCAGCACTA
TTACATCATCATCAGGAGGATTTTCGAAGAACATAATGCCAGCCAGCGTC
CGCTCCAACAATCGAATTGAATGACTATTTTCTGACCATGGACGACATAT
TCGAATGAATTCAACTTGAACAAGCTAGTAACGCATCTCAGCGGTCTGTG
TCTTTCAGTGAAAGAAACAAAGAGCCTCAAAGCCCATGTAACTTGGGAAG
TCGGGCCGTTTTCGTTGTTATGCGGCTTGGCATCTTTGGGTGAAACGGTG
CGATATGGGACTTTCAAGCCGCTTTGAGCGATTTACAAATCATTTATACT
CATATGAACTCTCACTAGTGAATCCACTTGGGTGGACAGATGAGTTCGAA
ACCAACAACTCTACCAATTTGAGTTCCACTACTATTTATAGTAGGGAGAA
ATGGCCTAAAACCCCTTGGGTGGCACAGAGTAGACCAAGATCCCTCCCAG
AAAGCCCCCAAGTGATAGAATCCAAACAACATGTGGACCCTAAAACAAGT
AAAATATCTTTTCCAGAGCTTTTTTCTTGCGGAGATCTGGTGGCACAGCT
TGAATAGCATTTTGAACACACTACACTATACATGAAGGTCAGCATGCTTA
AATGGCCTAAAATGAAGTATTGGGCCCTTCAAAAACCTTCAAAATGTGTT
CTGAGTGCACCTAAATGTGTCCCCATGCATTATTATGACTTTTGGAACTT
TTGAACTTTTCGTGAAAAAATTCGCCGTAATTCCCTATAGATACCCCAAA
ACCTTAACCCTGACGGCCACTACCCAGATCTTCTCGGGGCATCAGTACTG
CTGCACTAAGCTTTTTTTTCCAAGCGAGCTTGCTGGGACCCCAGCCCCAC
CTCCCTAGCCAGTCCCCCCCCCCAAGGCCTGTAGAGGCTGCCCGAGTCAG
TACATCAATACAACCTCCTGCCGATGCACATCCTCCTCCCCCCCTTTCCC
CTACCTGTGCTAACGATGGTGCCTCATCTACCCAGAAGAGTGAAAATACA
TCGATAAAGATTTCTTAGAAAAATGAGCAGACCCTTGCTATAGTAATAAT
CTGCTCTTGACCCTTACTGTAGTATTCAATCCATCCCAACCACAGCACTC
TGGACACATCACCGTGTGTTCCAGAAGTACAAACAAGATAGATGAGCACG
CCCCGCGCCTTTGTATTTCCCTGGGCTCCGCCTCAGCTTCAACCAAGGAG
CCCCCCCCTCTCCACCTCAACGGACAACCGACCCAGGCGTGGGCCTGTTC
ACGTACAGCAACCACCACAGCATGCTGGACGACCCCGGGCTGCCCGCGCT
CTTCATGCCCTGGCACAGCATGCCCTGGCGGAAGATGCGCTGGAACCTCT
GCAATACCGACATGTACTTCGTGTGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig10:47849..49624-

>mRNA_H-akashiwo_Contig10.1.1 ID=mRNA_H-akashiwo_Contig10.1.1|Name=mRNA_H-akashiwo_Contig10.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=210bp|location=Sequence derived from alignment at H-akashiwo_Contig10:47849..49624- (Heterosigma akashiwo CCMP452)
AGGGTGCTGAATAAAACCAAGGTCCACAACTACAAAACCCTGGAGAAGCT
GATGCTGGAGCGGGATGAAGGCGTGGGCCTGTTCACGTACAGCAACCACC
ACAGCATGCTGGACGACCCCGGGCTGCCCGCGCTCTTCATGCCCTGGCAC
AGCATGCCCTGGCGGAAGATGCGCTGGAACCTCTGCAATACCGACATGTA
CTTCGTGTGA
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