mRNA_H-akashiwo_Contig1.176.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A6V1RCM3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCM3_HETAK) HSP 1 Score: 295 bits (756), Expect = 6.670e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPGYSSSIEEFKAVVPDAQSPLDFFQAKGQWGNGEPFAPLEDGNLADPPTKCVIS 421
LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPGYSSSIEEFKAVVPDAQSPLDFFQAKGQWGNGEPFAPLEDGNLADPPTKCVIS
Sbjct: 181 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPGYSSSIEEFKAVVPDAQSPLDFFQAKGQWGNGEPFAPLEDGNLADPPTKCVIS 320
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7S1HRZ5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HRZ5_9EUGL) HSP 1 Score: 162 bits (411), Expect = 2.930e-44 Identity = 75/124 (60.48%), Postives = 89/124 (71.77%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPGYSSSIEEFKAVVPDAQSPLDFFQAKGQWGNGEPFAP 373
LW LKVK V C DIAKAA M P W+GKTLDC +C +G ++A++LS+ SGV+C+YK +P M L MRDLYNMVAFF PGYSSSIE+FK VVPDA P D+F+AKG W NGE F P
Sbjct: 128 LWPATLKVKMVACVDIAKAAKEMLASPAEWQGKTLDCAACNASGHDLANSLSEVSGVKCSYKKAVPGLAMWLFMRDLYNMVAFFMGPGYSSSIEDFKKVVPDAMGPKDWFKAKGVWSNGEAFKP 251
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7S3T3Y6_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T3Y6_9SPIT) HSP 1 Score: 147 bits (371), Expect = 4.410e-39 Identity = 69/121 (57.02%), Postives = 80/121 (66.12%), Query Frame = 2
Query: 5 WRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPGYSSSIEEFKAVVPDAQSPLDFFQAKGQWGNGEPF 367
WR DLK+K+V C DI KAA VMF P WKGKTLDC S E+TGDE A AL++ SG C Y +P+F M+ M+DL MV FFE PGYSS I +FK VVP A FF GQW +GE F
Sbjct: 183 WRGDLKLKYVACEDIGKAAAVMFATPLVWKGKTLDCASDELTGDEAAEALTEVSGTPCKYSTAMPTFFMKWFMKDLAAMVKFFEEPGYSSDITKFKQVVPSAMDAKAFFAKTGQWSDGEKF 303
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7S3ZVY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVY2_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.640e-37 Identity = 65/114 (57.02%), Postives = 82/114 (71.93%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPGYSSSIEEFKAVVPDAQSPLDFFQAKG 343
LW+ DLKVKHV C DI KAA VM +P W+GKTLDC S ++TG+++A+AL++ SGV CTY V +P FIMR M+DL M+ FFE GY S I FKAVVPDA +F+A+G
Sbjct: 170 LWQADLKVKHVACRDIGKAAAVMLANPAKWRGKTLDCASDDLTGEDVAAALTEVSGVECTYGVAVPRFIMRCVMKDLNAMIEFFETTGYDSDIAAFKAVVPDALDCKAWFEARG 283
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7R9W039_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W039_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.030e-29 Identity = 58/126 (46.03%), Postives = 86/126 (68.25%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRA-WKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPGYSSSIEEFKAVVPDAQSPLDFFQAKGQWGN--GEPFA 370
L DL VK++G D+ KA+ + D RA ++GKT + SC TG E+A L++ASGV CTY +P F+ L M ++Y+M+ FF++PGYS+S+EEF+ +VPDA + D+F+ KG+W + GE FA
Sbjct: 69 LTEKDLPVKYIGMPDLGKASKAILIDKRAEFEGKTFEAASCIHTGTELAECLTKASGVPCTYSKQMPEFVFWLFMGEIYHMIQFFKDPGYSASVEEFQKLVPDAMNAEDWFRYKGEWSSPAGEKFA 194
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7S1BKF7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKF7_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.640e-26 Identity = 47/122 (38.52%), Postives = 77/122 (63.11%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPGYSSSIEEFKAVVPDAQSPLDFFQAKGQWGNGEPF 367
L + ++ +K+V D+ K + + DP +KG ++ + TG E+A AL++ SGV CTY + +P +++ DLYNMV +FE+ GY++ ++EFK +VPDA +F+ KGQW +GE F
Sbjct: 54 LTKPEVSLKYVATIDVGKGSAELLLDPAKYKGTPIEAAGGKHTGTELAQALTEVSGVDCTYSISLPRWVLWFMFGDLYNMVVWFESDGYTADLDEFKKLVPDAMDAKAWFKDKGQWADGETF 175
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7S3VCV3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCV3_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.910e-25 Identity = 49/123 (39.84%), Postives = 81/123 (65.85%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPG-YSSSIEEFKAVVPDAQSPLDFFQAKGQWGNGEPF 367
L + + +++ D+ KA+ V+ +P +KGKT++ V+ + G ++A+AL++ASG+ CT+ + +P +RL DLY MV +FE G Y++ IEEFK +VPDA +F++KG+W NGE F
Sbjct: 253 LTKEETSCQYISIVDVGKASAVLLTEPGTYKGKTIEAVADKCNGTDLATALTEASGMECTFSMAMPRMALRLMDSDLYQMVTWFEETGGYTADIEEFKKIVPDAMDAKAWFESKGKWANGELF 375
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7S3QBA5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBA5_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.010e-24 Identity = 49/123 (39.84%), Postives = 81/123 (65.85%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMVAFFENPG-YSSSIEEFKAVVPDAQSPLDFFQAKGQWGNGEPF 367
L + + +++ D+ KA+ V+ +P +KGKT++ V+ + G ++A+AL++ASG+ CT+ + +P +RL DLY MV +FE G Y++ IEEFK +VPDA +F++KG+W NGE F
Sbjct: 456 LTKEETSCQYISIVDVGKASAVLLTEPGTYKGKTIEAVADKCNGTDLATALTEASGMECTFSMAMPRMALRLMDSDLYQMVTWFEETGGYTADIEEFKKIVPDAMDAKAWFESKGKWANGELF 578
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7R9YZ43_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YZ43_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.720e-15 Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLAMRDLYNMV----AFFENPGYSSSIEEFKAVVPDAQSPLDFFQ 334
L++ ++V +V AD+ KA V+ ++P W GKTL C++C TG+E+ S+ SG+ CTY FI+R + DLY+MV A +S I F+ V+P+A +DF Q
Sbjct: 82 LYKGWVQVNYVATADVGKATVLTAQNPCEWNGKTLACITCRDTGEELTKVFSKVSGISCTYTAAPLQFILRQLLTDLYHMVVLRRATSAGSWWSEEIRAFRKVLPNA---VDFEQ 193
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Match: A0A7S2RUB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RUB1_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.310e-11 Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 2
Query: 2 LWRHDLKVKHVGCADIAKAAVVMFKDPRAWKGKTLDCVSCEVTGDE 139
LW HDLK+K V C DI KAA M ++P+AW+ KTLDCVSC VTGD+
Sbjct: 175 LWPHDLKLKMVSCHDIGKAAAAMIENPKAWQDKTLDCVSCCVTGDQ 220 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.176.1 >prot_H-akashiwo_Contig1.176.1 ID=prot_H-akashiwo_Contig1.176.1|Name=mRNA_H-akashiwo_Contig1.176.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=119bp MFKDPRAWKGKTLDCVSCEVTGDEIASALSQASGVRCTYKVLIPSFIMRLback to top mRNA from alignment at H-akashiwo_Contig1:7372588..7373365+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.176.1 ID=mRNA_H-akashiwo_Contig1.176.1|Name=mRNA_H-akashiwo_Contig1.176.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=778bp|location=Sequence derived from alignment at H-akashiwo_Contig1:7372588..7373365+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:7372588..7373365+ >mRNA_H-akashiwo_Contig1.176.1 ID=mRNA_H-akashiwo_Contig1.176.1|Name=mRNA_H-akashiwo_Contig1.176.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=357bp|location=Sequence derived from alignment at H-akashiwo_Contig1:7372588..7373365+ (Heterosigma akashiwo CCMP452)back to top |