mRNA_H-fluviatilis_contig101015.273.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig101015.273.1
Unique NamemRNA_H-fluviatilis_contig101015.273.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
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BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: D8LKP7_ECTSI (Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP7_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 8.040e-50
Identity = 86/98 (87.76%), Postives = 96/98 (97.96%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
            EN+DTLALLDCLGEGAAAEEGGPLRE+CA+GVVEFLRYAIKQ++K+QQ AEGPVAVDALLTRVFSL THPDKNRRLGGL+AFNQLC+PLREETAL++R
Sbjct: 1109 ENDDTLALLDCLGEGAAAEEGGPLREVCAKGVVEFLRYAIKQSTKRQQ-AEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALLNR 1205
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BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A6H5L056_9PHAE (NUC194 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L056_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 7.060e-49
Identity = 84/98 (85.71%), Postives = 95/98 (96.94%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
            EN+DTLALLDCLGEGAAAE+GGPLRE+CA+GVVEFLRYAIKQ++K+QQ AEGP AVDALLTRVFSL THPDKNRRLGGL+AFNQLC+PLREETAL++R
Sbjct:  768 ENDDTLALLDCLGEGAAAEDGGPLREVCAKGVVEFLRYAIKQSTKRQQ-AEGPAAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALLNR 864
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BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A2C9K058_BIOGL (DNA-dependent protein kinase catalytic subunit n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K058_BIOGL)

HSP 1 Score: 89.0 bits (219), Expect = 1.630e-18
Identity = 41/98 (41.84%), Postives = 66/98 (67.35%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
            E+ +T+ALLDC+ +G        LR+ CA+ + EFL++++KQ SKK  + + P+ V ++L R++S   HP+ ++RLG  +AFN +   LREE AL+DR
Sbjct: 1008 ESPETMALLDCIFDGLIQSNDMALRDFCAKCLREFLKWSLKQISKKSAE-KNPINVKSVLKRIYSFSAHPNASKRLGAALAFNNIYMVLREEDALVDR 1104
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BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A6I8QDF5_XENTR (DNA-dependent protein kinase catalytic subunit n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8QDF5_XENTR)

HSP 1 Score: 85.5 bits (210), Expect = 2.680e-17
Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALID 291
            E++DT+ALL+ +  G        LR+ C + + EFLR++IKQT+  +QQA+ PV   +L  R++SL  HP+  +RLG  +AFN + +  REETAL++
Sbjct:  959 ESQDTVALLEAILAGIVDPVDSTLRDFCGQCIQEFLRWSIKQTTP-EQQAKSPVNTTSLFKRLYSLALHPNAFKRLGAALAFNNIYREFREETALVE 1054
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BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: PRKDC_XENLA (DNA-dependent protein kinase catalytic subunit n=3 Tax=Xenopus laevis TaxID=8355 RepID=PRKDC_XENLA)

HSP 1 Score: 84.7 bits (208), Expect = 4.990e-17
Identity = 41/97 (42.27%), Postives = 63/97 (64.95%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALID 291
            E++DT+ALL+ +  G        LR+ C + + EFLR++IKQT+   QQA+ PV   +L  R++SL  HP+  +RLG  +AFN + +  REETAL++
Sbjct: 1024 ESQDTVALLEAILTGIVDPVDSTLRDFCGQCIQEFLRWSIKQTTP-DQQAKSPVNTTSLFKRLYSLALHPNAFKRLGAALAFNNIYRDFREETALVE 1119
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BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I656_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I656_PODMU)

HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
            E++DT+ALL+ + EG        LR+ C + V EFL+++IKQ S  QQQ   PV   +L  R++SL  HP+  +RLG  +AFN + +  REE+AL+D+
Sbjct:  929 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1025
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BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I696_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I696_PODMU)

HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
            E++DT+ALL+ + EG        LR+ C + V EFL+++IKQ S  QQQ   PV   +L  R++SL  HP+  +RLG  +AFN + +  REE+AL+D+
Sbjct:  968 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1064
[Close]
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I629_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I629_PODMU)

HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
            E++DT+ALL+ + EG        LR+ C + V EFL+++IKQ S  QQQ   PV   +L  R++SL  HP+  +RLG  +AFN + +  REE+AL+D+
Sbjct:  957 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1053
[Close]
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I613_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I613_PODMU)

HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
            E++DT+ALL+ + EG        LR+ C + V EFL+++IKQ S  QQQ   PV   +L  R++SL  HP+  +RLG  +AFN + +  REE+AL+D+
Sbjct:  970 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1066
[Close]
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Match: A0A670I625_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I625_PODMU)

HSP 1 Score: 84.3 bits (207), Expect = 6.810e-17
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:    1 ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQAEGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR 294
            E++DT+ALL+ + EG        LR+ C + V EFL+++IKQ S  QQQ   PV   +L  R++SL  HP+  +RLG  +AFN + +  REE+AL+D+
Sbjct:  970 ESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQ-STPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQ 1066
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig101015.273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKP7_ECTSI8.040e-5087.76Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5L056_9PHAE7.060e-4985.71NUC194 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A2C9K058_BIOGL1.630e-1841.84DNA-dependent protein kinase catalytic subunit n=1... [more]
A0A6I8QDF5_XENTR2.680e-1742.27DNA-dependent protein kinase catalytic subunit n=2... [more]
PRKDC_XENLA4.990e-1742.27DNA-dependent protein kinase catalytic subunit n=3... [more]
A0A670I656_PODMU6.810e-1742.86DNA-dependent protein kinase catalytic subunit n=1... [more]
A0A670I696_PODMU6.810e-1742.86DNA-dependent protein kinase catalytic subunit n=1... [more]
A0A670I629_PODMU6.810e-1742.86DNA-dependent protein kinase catalytic subunit n=1... [more]
A0A670I613_PODMU6.810e-1742.86DNA-dependent protein kinase catalytic subunit n=1... [more]
A0A670I625_PODMU6.810e-1742.86DNA-dependent protein kinase catalytic subunit n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig101015contigH-fluviatilis_contig101015:14..762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score177.9
Seed ortholog evalue2.3e-42
Seed eggNOG ortholog2880.D8LKP7
KEGG koko:K06642,ko:K07203,ko:K08873
KEGG Pathwayko01521,ko01522,ko03015,ko03450,ko04012,ko04066,ko04072,ko04110,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map03015,map03450,map04012,map04066,map04072,map04110,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00297
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0891@2759
EC2.7.11.1
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03032,ko03400,ko04131
Hectar predicted targeting categoryother localisation
Exons2
Model size297
Cds size297
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929028.6052918-CDS-H-fluviatilis_contig101015:13..1661622929028.6052918-CDS-H-fluviatilis_contig101015:13..166Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig101015 14..166 -
1691135155.9459581-CDS-H-fluviatilis_contig101015:13..1661691135155.9459581-CDS-H-fluviatilis_contig101015:13..166Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig101015 14..166 -
1622929028.616572-CDS-H-fluviatilis_contig101015:618..7621622929028.616572-CDS-H-fluviatilis_contig101015:618..762Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig101015 619..762 -
1691135155.9582765-CDS-H-fluviatilis_contig101015:618..7621691135155.9582765-CDS-H-fluviatilis_contig101015:618..762Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig101015 619..762 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig101015.273.1prot_H-fluviatilis_contig101015.273.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig101015 14..762 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig101015.273.1

>prot_H-fluviatilis_contig101015.273.1 ID=prot_H-fluviatilis_contig101015.273.1|Name=mRNA_H-fluviatilis_contig101015.273.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=99bp
ENEDTLALLDCLGEGAAAEEGGPLRELCARGVVEFLRYAIKQTSKKQQQA
EGPVAVDALLTRVFSLVTHPDKNRRLGGLIAFNQLCKPLREETALIDR*
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mRNA from alignment at H-fluviatilis_contig101015:14..762-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig101015.273.1 ID=mRNA_H-fluviatilis_contig101015.273.1|Name=mRNA_H-fluviatilis_contig101015.273.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=749bp|location=Sequence derived from alignment at H-fluviatilis_contig101015:14..762- (Heribaudiella fluviatilis SAG_13_90)
GAAAACGAAGACACGTTGGCTTTGCTGGATTGCTTGGGCGAAGGAGCCGC
TGCGGAGGAAGGCGGTCCGCTCCGTGAGCTGTGCGCCAGAGGGGTCGTCG
AGTTCCTGCGCTATGCGATCAAGCAGACAAGCAAGAAGCAGCAGGTGATT
GGTTTGGCGTCAGGATCGACGTGGATTTTGCAAGGCCAATTCCCATCTTG
GCTGTGTGGCGGGGTTCCGCCCGCCTGGTGGCGACCATGTTATGGATAGT
GGAGAAGTTGCAAAGTGAGTATGTTTGATGCGCTGAACATGTCCCAGGTG
AATTTATCTCGTCTTGTGACATTTACAGCAAGAAGCTGCCTGTCCTAAGA
AGTCGTTTTCGACGCTGCAGGAAATGTGCGCCTACATTGCTGCGTCTTGT
CTCGTCGTTAAATTACGACTTCTAGAACGGAATAGGCAATCCGCAGGCTC
AAGGACAACCCCAGCTGCATATCCGCCAGCGTGCACGCCCAGCCACCCCC
CCTCCGACCTTGCCCCCCCCGCGAGCCCCCCCCCCCCCCTTTTGCTCGAA
TGCCGTCCGAATTGCTTACCTTGCGCTGCGCTTTGTGCTTGTTGAGCAGG
CGGAAGGCCCTGTTGCGGTGGACGCTTTGCTTACTCGGGTATTTTCTCTC
GTGACGCACCCGGACAAGAATCGCCGGCTAGGAGGACTCATAGCGTTCAA
CCAACTGTGTAAACCTCTGCGAGAAGAGACTGCTCTCATCGATAGGTAA
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Coding sequence (CDS) from alignment at H-fluviatilis_contig101015:14..762-

>mRNA_H-fluviatilis_contig101015.273.1 ID=mRNA_H-fluviatilis_contig101015.273.1|Name=mRNA_H-fluviatilis_contig101015.273.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=594bp|location=Sequence derived from alignment at H-fluviatilis_contig101015:14..762- (Heribaudiella fluviatilis SAG_13_90)
GAAAACGAAGACACGTTGGCTTTGCTGGATTGCTTGGGCGAAGGAGCCGC
TGCGGAGGAAGGCGGTCCGCTCCGTGAGCTGTGCGCCAGAGGGGTCGTCG
AGTTCCTGCGCTATGCGATCAAGCAGACAAGCAAGAAGCAGCAGGAAAAC
GAAGACACGTTGGCTTTGCTGGATTGCTTGGGCGAAGGAGCCGCTGCGGA
GGAAGGCGGTCCGCTCCGTGAGCTGTGCGCCAGAGGGGTCGTCGAGTTCC
TGCGCTATGCGATCAAGCAGACAAGCAAGAAGCAGCAGCAGGCGGAAGGC
CCTGTTGCGGTGGACGCTTTGCTTACTCGGGTATTTTCTCTCGTGACGCA
CCCGGACAAGAATCGCCGGCTAGGAGGACTCATAGCGTTCAACCAACTGT
GTAAACCTCTGCGAGAAGAGACTGCTCTCATCGATAGGTAACAGGCGGAA
GGCCCTGTTGCGGTGGACGCTTTGCTTACTCGGGTATTTTCTCTCGTGAC
GCACCCGGACAAGAATCGCCGGCTAGGAGGACTCATAGCGTTCAACCAAC
TGTGTAAACCTCTGCGAGAAGAGACTGCTCTCATCGATAGGTAA
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