mRNA_H-fluviatilis_contig100957.260.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig100957.260.1
Unique NamemRNA_H-fluviatilis_contig100957.260.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: A0A1Q3SW91_9MICO (Uncharacterized protein n=5 Tax=Bacteria TaxID=2 RepID=A0A1Q3SW91_9MICO)

HSP 1 Score: 536 bits (1380), Expect = 5.460e-189
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
Query:    1 TIDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            TIDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR
Sbjct:   32 TIDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 311          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: UPI0013D1C49B (DUF3375 family protein n=1 Tax=Fodinicola acaciae TaxID=2681555 RepID=UPI0013D1C49B)

HSP 1 Score: 383 bits (984), Expect = 9.640e-129
Identity = 196/280 (70.00%), Postives = 243/280 (86.79%), Query Frame = 1
Query:    4 IDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLL-TSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            +D SVSAEWFHER+AE ++  P   GDR+PAEHC++WVE RWLETE++AGRLRYRLS YSLRAL+ VREIV+GE++V+ ARL SIAHAV  LADMTNPDR +QVRRID +I+ L+ +R +I +GR RL+TVEE +QQLREILAMTR+LPADFRQLRTLVEDRHQ+VARRAMADGP+KA+LVE+YL E+DLL  TPEG +YQGFSR+L +S+QA+SI +DI+QIL+Q+FA +HMTV +R QLETM STL+ A+L V+Q Y++WT+SLRRFLTRS H +HRR
Sbjct:   42 VDESVSAEWFHERIAEALENNPDWHGDRSPAEHCRRWVEARWLETEIEAGRLRYRLSPYSLRALRIVREIVEGESSVSGARLGSIAHAVRLLADMTNPDREIQVRRIDAQIAELRNRRKEIATGRARLATVEEMRQQLREILAMTRSLPADFRQLRTLVEDRHQKVARRAMADGPSKADLVEEYLQENDLLARTPEGIAYQGFSRMLASSQQARSISEDIEQILAQDFAGDHMTVAQREQLETMLSTLMRAELAVEQVYLRWTASLRRFLTRSAHARHRR 321          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: UPI0020218567 (DUF3375 domain-containing protein n=2 Tax=Kibdelosporangium TaxID=2029 RepID=UPI0020218567)

HSP 1 Score: 379 bits (972), Expect = 6.510e-127
Identity = 192/280 (68.57%), Postives = 239/280 (85.36%), Query Frame = 1
Query:    4 IDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTS-KQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            +DGSVSAEWFHERV E +D +P   GDR PAEHC+KWVE RWLETE ++GRLRYRLS ++LRAL+ VREIV+GE++V+ ARL SIAHAV  LADMT+PDR V VRRID++I  L+++R++I +GR RL+T+EE +QQLREILAMTR+LPADF+QL TL+EDRHQ V R AM DGPTKAELVE+YLHE+DLL  TPEG +Y GFS++L S +++  I DD+DQIL Q+FAR+HMT T+R QLETMF+TLLAA+LRVQ+SYV+WT+SLRRFLTRS H ++RR
Sbjct:   43 VDGSVSAEWFHERVTEALDQIPDWHGDRLPAEHCRKWVESRWLETETESGRLRYRLSPHALRALRIVREIVEGESSVSGARLGSIAHAVRLLADMTSPDREVHVRRIDKQIEELQRRREEIVTGRARLATMEEMRQQLREILAMTRSLPADFQQLHTLIEDRHQSVVRHAMRDGPTKAELVEEYLHENDLLVKTPEGTAYLGFSQMLMSTRRSHEIRDDVDQILLQDFARDHMTPTQREQLETMFATLLAAELRVQKSYVRWTASLRRFLTRSAHGRYRR 322          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: A0A6F8YFM2_9ACTN (Uncharacterized protein n=2 Tax=Actinomycetia TaxID=1760 RepID=A0A6F8YFM2_9ACTN)

HSP 1 Score: 374 bits (959), Expect = 5.320e-125
Identity = 190/279 (68.10%), Postives = 234/279 (83.87%), Query Frame = 1
Query:    4 IDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            +DGSVSAEWFHERV+E  + +P   G   PAEHC+ WVE RWLETE   GRLRYRLS YSLRAL+FVRE+V+GETTV++ARL SI+HAV  LADMTNPDR+VQVRRID++I+ L+K+RDDI SGR RL+T+EE +QQLREILAMTR+LPADFRQLR++VEDRHQ VARRAM  GP KA+LVEDYL E+DLL  T +G +Y GFSRLL+S Q + +  D+DQIL+QEFAREHMT  +R +L++M STLLAA+L VQ SY++W++SLRRFLTR+ H +H+R
Sbjct:   40 VDGSVSAEWFHERVSEAREQIPEWQGSVAPAEHCRDWVEKRWLETETLNGRLRYRLSPYSLRALRFVRELVEGETTVSSARLGSISHAVRLLADMTNPDRKVQVRRIDKQIAELRKRRDDIASGRVRLATLEEMKQQLREILAMTRSLPADFRQLRSMVEDRHQDVARRAMVQGPPKADLVEDYLRENDLLSRTSQGTAYLGFSRLLSSAQTEQLRADVDQILAQEFAREHMTAAQREELDSMLSTLLAAELDVQNSYLRWSASLRRFLTRAAHGRHQR 318          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: UPI00048EFA9F (DUF3375 family protein n=1 Tax=Microbacterium luticocti TaxID=451764 RepID=UPI00048EFA9F)

HSP 1 Score: 372 bits (954), Expect = 3.230e-124
Identity = 187/278 (67.27%), Postives = 232/278 (83.45%), Query Frame = 1
Query:    7 DGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            DG+VSAEWFHERVAE ++A      +R+PAE+C+KWV+DRWLETE D GR+ YRLS YSLRA+QFVRE+V+GE+TVT ARL +IA AVHTLA MTNPDR+ QV R+D+EI  LK++RD IK G+ RL+TV+E +QQL E+L MTR+LPADFRQLRTLVE+RHQ VARRA+ADGPTKAELV+DYLHEHDLLG T EGRSY+ FS++L+   A S  +D+  ILSQ+FAREHMT  +R +LET++STLL+ QL VQ+SY++WT SLRRFLTR+   +HRR
Sbjct:   41 DGAVSAEWFHERVAEALEAGQQGKSERSPAEYCRKWVDDRWLETEYDNGRVHYRLSPYSLRAIQFVREVVEGESTVTGARLHNIASAVHTLATMTNPDRQAQVERLDKEILELKRRRDRIKDGQERLATVDEMRQQLGEVLGMTRSLPADFRQLRTLVEERHQAVARRALADGPTKAELVDDYLHEHDLLGQTAEGRSYRSFSQVLSQADAHSFREDVTTILSQDFAREHMTAAQRERLETLYSTLLSEQLEVQKSYLRWTGSLRRFLTRAATGRHRR 318          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: A0A1C5IK48_9ACTN (Uncharacterized protein n=3 Tax=Micromonospora TaxID=1873 RepID=A0A1C5IK48_9ACTN)

HSP 1 Score: 371 bits (953), Expect = 4.300e-124
Identity = 193/279 (69.18%), Postives = 230/279 (82.44%), Query Frame = 1
Query:    4 IDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            IDGSVSAEWFHERV+E  + +P   G  TPAEHC+ WVE RWLETE   GRLRYRLS YSLRAL+FVRE+V+GETTV+ ARL SI HAV  LADMTNPDR VQVRRID++I+ L+K+R DI SGR RL+T+EE +QQLREILAMTR+LPADFRQLRT+VEDRHQ VARRAM  GP KA+LVEDYL E+DLL  T +G +Y GFSRLL+S+Q + +  DIDQIL+QEFAREH+T  +R +L+ M STLLAA+L VQ SYV+W++SLRRFLTR  H +H+R
Sbjct:   40 IDGSVSAEWFHERVSEAREQVPDWQGSVTPAEHCRDWVEKRWLETETLNGRLRYRLSPYSLRALRFVRELVEGETTVSGARLGSITHAVRLLADMTNPDRDVQVRRIDQQIAELRKRRQDIASGRVRLATLEEMKQQLREILAMTRSLPADFRQLRTMVEDRHQEVARRAMVQGPRKADLVEDYLRENDLLSKTSQGTAYLGFSRLLSSRQTEQLRADIDQILAQEFAREHVTAAQREELDGMLSTLLAAELDVQSSYVRWSASLRRFLTRVAHGRHQR 318          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: UPI001AD5183F (DUF3375 family protein n=1 Tax=Actinoplanes toevensis TaxID=571911 RepID=UPI001AD5183F)

HSP 1 Score: 369 bits (947), Expect = 3.480e-123
Identity = 189/279 (67.74%), Postives = 233/279 (83.51%), Query Frame = 1
Query:    4 IDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            +DGSVSAEWFHER++E  + +P   G+ TPAE+C+ WVE RWLETE   GRLRYRLS YSLRAL+FVRE+VDGETTV+ ARL SI+HA+  LADMTNP+R VQVRRI+R+I+ L+K+RDDI +GR RL+T+EE +QQLREILAMTR+LPADFRQLRT+VEDRHQ VARRAMA GP KA+LVE+YL E+DLL  T +G +Y GFSRLL+S Q + +  DIDQIL Q FAREHMT T+R +L+ M STLLAA+L VQ SY++W++SLRRFLTR+ H +H+R
Sbjct:   40 VDGSVSAEWFHERISEAREQIPQRQGNVTPAEYCRDWVEKRWLETETPNGRLRYRLSPYSLRALRFVRELVDGETTVSGARLGSISHAMRLLADMTNPNRDVQVRRINRQIAELRKRRDDIAAGRVRLATLEEMKQQLREILAMTRSLPADFRQLRTMVEDRHQEVARRAMAQGPPKADLVEEYLRENDLLSKTSQGTAYLGFSRLLSSAQTEQLRADIDQILGQGFAREHMTTTQREELDGMLSTLLAAELDVQNSYLRWSASLRRFLTRAAHGRHQR 318          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: A0A1B2HEE0_9PSEU (Uncharacterized protein n=1 Tax=Lentzea guizhouensis TaxID=1586287 RepID=A0A1B2HEE0_9PSEU)

HSP 1 Score: 362 bits (930), Expect = 1.290e-120
Identity = 189/279 (67.74%), Postives = 230/279 (82.44%), Query Frame = 1
Query:    4 IDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            +DGSVSAEWFHERVAE    +    G+ TPAEHC+ WVE RWLETE   GRLRYRLS ++LRAL+FVRE+V+GETTV+ ARL SI+HAV  LADMTNPDR VQVRRID+EI+ L K+RDDI SGR RL+T+EE +QQLREILAMTR+LPADFRQLRT+VEDRHQ VARRAMA G  KA+LVE+YL E+DLL  T +G +Y GFSRLL+S+Q++ +  DIDQIL Q FA EHMT  +R +L++M STLLAA+L VQ SY++W++SLRRFLTR+ H +H+R
Sbjct:   40 LDGSVSAEWFHERVAEARAQIRDWQGNVTPAEHCRDWVEKRWLETETLNGRLRYRLSPHTLRALRFVRELVEGETTVSGARLGSISHAVRLLADMTNPDREVQVRRIDQEIAELHKRRDDIASGRVRLATLEEMKQQLREILAMTRSLPADFRQLRTMVEDRHQEVARRAMAQGSPKADLVEEYLRENDLLSKTSQGTAYVGFSRLLSSRQSEQLRADIDQILGQAFALEHMTAAQREELDSMLSTLLAAELDVQNSYLRWSASLRRFLTRAAHGRHQR 318          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: A0A4Q7UXJ5_9PSEU (Uncharacterized protein DUF3375 n=1 Tax=Pseudonocardia sediminis TaxID=1397368 RepID=A0A4Q7UXJ5_9PSEU)

HSP 1 Score: 360 bits (925), Expect = 8.620e-120
Identity = 183/279 (65.59%), Postives = 231/279 (82.80%), Query Frame = 1
Query:    4 IDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            +DGSVSAEWFHERV E ++ +P   GD +PA+HC+ W+E RWLETE   GRLRYRLS YSLRAL+FV E+V+GETTV++ARL SI+HAV  LADMT+PDR+VQ+RRIDR+I  LK++R+DI SG+ RL+ +EE + QLREILAMTR+LPADFRQLRT+VEDRHQ VARRAM DGP KA+LVE+YL E+D+L  T +G +Y GFSRLL+S+Q + +  DIDQIL+QEFAR HM+  +R +L+ M STLL A+L VQ SYV+WT+SLRRFLTR+ H +H+R
Sbjct:   45 VDGSVSAEWFHERVTEALELIPEWRGDVSPADHCRDWIEKRWLETEKLNGRLRYRLSPYSLRALRFVGELVEGETTVSSARLGSISHAVRLLADMTSPDRQVQLRRIDRQIVELKQRRNDIASGQVRLANLEEMKLQLREILAMTRSLPADFRQLRTMVEDRHQEVARRAMVDGPPKADLVEEYLRENDMLSRTSQGSAYLGFSRLLSSRQTEQLRVDIDQILAQEFARLHMSAAQRDELDCMLSTLLTAELDVQNSYVRWTASLRRFLTRAAHGRHQR 323          
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Match: A0A840PYF0_9PSEU (Uncharacterized protein n=2 Tax=Saccharopolyspora phatthalungensis TaxID=664693 RepID=A0A840PYF0_9PSEU)

HSP 1 Score: 360 bits (924), Expect = 1.820e-119
Identity = 186/279 (66.67%), Postives = 229/279 (82.08%), Query Frame = 1
Query:    4 IDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDAGRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPDRRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLPADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRSYQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLAAQLRVQQSYVKWTSSLRRFLTRSTHEKHRR 840
            +DGSVSAEWFHERV E    +P    +  PA+HC+ WVE RWLETE   GRLRYRLS YSLRAL+FVRE+V+GETTV+ ARL SI+HAV  LADMT+PDR VQVRRID++I  L+K+R+DI SGR RL+T+EE +QQLREILAMTR+LPADFRQLRT+VEDRHQ V+RRAMA GP KA+LVEDYL E+DLL  T +G +Y GFS+LL+S+Q   +  DIDQIL+Q+FAREHMT  +R +L++M STLLAA+L VQ SYV+W++SLRR LTR+ H +H+R
Sbjct:   58 VDGSVSAEWFHERVLEARAQVPEWQSNVAPADHCRDWVEKRWLETETLNGRLRYRLSPYSLRALRFVRELVEGETTVSGARLGSISHAVRLLADMTDPDRVVQVRRIDQQIVELRKRREDIASGRVRLATLEEMKQQLREILAMTRSLPADFRQLRTMVEDRHQEVSRRAMAQGPPKADLVEDYLRENDLLSKTSQGTAYLGFSQLLSSRQTDQLRSDIDQILAQDFAREHMTAAQRDELDSMLSTLLAAELDVQNSYVRWSASLRRLLTRAAHGRHQR 336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100957.260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Q3SW91_9MICO5.460e-189100.00Uncharacterized protein n=5 Tax=Bacteria TaxID=2 R... [more]
UPI0013D1C49B9.640e-12970.00DUF3375 family protein n=1 Tax=Fodinicola acaciae ... [more]
UPI00202185676.510e-12768.57DUF3375 domain-containing protein n=2 Tax=Kibdelos... [more]
A0A6F8YFM2_9ACTN5.320e-12568.10Uncharacterized protein n=2 Tax=Actinomycetia TaxI... [more]
UPI00048EFA9F3.230e-12467.27DUF3375 family protein n=1 Tax=Microbacterium luti... [more]
A0A1C5IK48_9ACTN4.300e-12469.18Uncharacterized protein n=3 Tax=Micromonospora Tax... [more]
UPI001AD5183F3.480e-12367.74DUF3375 family protein n=1 Tax=Actinoplanes toeven... [more]
A0A1B2HEE0_9PSEU1.290e-12067.74Uncharacterized protein n=1 Tax=Lentzea guizhouens... [more]
A0A4Q7UXJ5_9PSEU8.620e-12065.59Uncharacterized protein DUF3375 n=1 Tax=Pseudonoca... [more]
A0A840PYF0_9PSEU1.820e-11966.67Uncharacterized protein n=2 Tax=Saccharopolyspora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig100957contigH-fluviatilis_contig100957:3..842 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score234.2
Seed ortholog evalue7.5e-59
Seed eggNOG ortholog1416759.AYMR01000009_gene2947
EggNOG free text desc.Protein of unknown function (DUF3375)
EggNOG OGs2GW48@201174,COG4942@1,COG4942@2
COG Functional cat.D
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size840
Cds size840
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929027.3609693-CDS-H-fluviatilis_contig100957:2..8421622929027.3609693-CDS-H-fluviatilis_contig100957:2..842Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100957 3..842 -
1691135155.1940377-CDS-H-fluviatilis_contig100957:2..8421691135155.1940377-CDS-H-fluviatilis_contig100957:2..842Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig100957 3..842 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig100957.260.1prot_H-fluviatilis_contig100957.260.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig100957 3..842 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig100957.260.1

>prot_H-fluviatilis_contig100957.260.1 ID=prot_H-fluviatilis_contig100957.260.1|Name=mRNA_H-fluviatilis_contig100957.260.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=280bp
TIDGSVSAEWFHERVAETIDALPSMTGDRTPAEHCKKWVEDRWLETEMDA
GRLRYRLSAYSLRALQFVREIVDGETTVTTARLESIAHAVHTLADMTNPD
RRVQVRRIDREISRLKKQRDDIKSGRTRLSTVEEQQQQLREILAMTRTLP
ADFRQLRTLVEDRHQRVARRAMADGPTKAELVEDYLHEHDLLGDTPEGRS
YQGFSRLLTSKQAQSIPDDIDQILSQEFAREHMTVTERAQLETMFSTLLA
AQLRVQQSYVKWTSSLRRFLTRSTHEKHRR
back to top

mRNA from alignment at H-fluviatilis_contig100957:3..842-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig100957.260.1 ID=mRNA_H-fluviatilis_contig100957.260.1|Name=mRNA_H-fluviatilis_contig100957.260.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=840bp|location=Sequence derived from alignment at H-fluviatilis_contig100957:3..842- (Heribaudiella fluviatilis SAG_13_90)
ACCATCGATGGTTCCGTCTCCGCGGAGTGGTTCCATGAGCGGGTCGCTGA GACCATCGACGCCTTGCCGAGCATGACGGGAGATCGTACTCCCGCCGAGC ACTGTAAAAAGTGGGTCGAGGACCGGTGGCTGGAAACGGAGATGGACGCT GGCCGCCTGCGATACCGGCTCTCCGCCTACTCGCTGCGAGCCCTGCAGTT CGTCCGTGAGATCGTCGACGGTGAAACCACTGTCACCACGGCTCGGTTAG AGAGCATCGCGCATGCCGTCCACACGCTCGCGGATATGACCAACCCCGAC CGGCGCGTGCAGGTTCGTCGGATCGATCGGGAGATCTCCCGGCTCAAGAA GCAGCGGGACGACATCAAGTCTGGTCGGACCCGGCTGTCTACCGTGGAGG AGCAGCAACAGCAGCTGCGTGAGATCTTGGCGATGACCCGCACGCTGCCT GCGGACTTCCGGCAACTGCGCACCCTTGTCGAGGACCGTCACCAGCGAGT CGCCCGACGAGCGATGGCCGACGGTCCTACCAAAGCAGAGCTCGTCGAGG ACTACCTCCACGAGCACGACCTCCTCGGCGACACCCCCGAGGGCCGCTCC TACCAAGGGTTTTCGAGGCTGTTGACGTCCAAGCAGGCCCAATCCATCCC GGACGACATCGATCAGATCCTCTCCCAGGAGTTCGCCCGCGAGCACATGA CTGTGACCGAGCGGGCGCAGCTCGAGACGATGTTCTCGACCCTGCTCGCC GCGCAACTTCGCGTACAGCAGAGCTACGTCAAATGGACCTCGTCACTGCG GCGCTTCCTCACCAGGAGCACACACGAGAAGCACCGGCGC
back to top

Coding sequence (CDS) from alignment at H-fluviatilis_contig100957:3..842-

>mRNA_H-fluviatilis_contig100957.260.1 ID=mRNA_H-fluviatilis_contig100957.260.1|Name=mRNA_H-fluviatilis_contig100957.260.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1680bp|location=Sequence derived from alignment at H-fluviatilis_contig100957:3..842- (Heribaudiella fluviatilis SAG_13_90)
ACCATCGATGGTTCCGTCTCCGCGGAGTGGTTCCATGAGCGGGTCGCTGA
GACCATCGACGCCTTGCCGAGCATGACGGGAGATCGTACTCCCGCCGAGC
ACTGTAAAAAGTGGGTCGAGGACCGGTGGCTGGAAACGGAGATGGACGCT
GGCCGCCTGCGATACCGGCTCTCCGCCTACTCGCTGCGAGCCCTGCAGTT
CGTCCGTGAGATCGTCGACGGTGAAACCACTGTCACCACGGCTCGGTTAG
AGAGCATCGCGCATGCCGTCCACACGCTCGCGGATATGACCAACCCCGAC
CGGCGCGTGCAGGTTCGTCGGATCGATCGGGAGATCTCCCGGCTCAAGAA
GCAGCGGGACGACATCAAGTCTGGTCGGACCCGGCTGTCTACCGTGGAGG
AGCAGCAACAGCAGCTGCGTGAGATCTTGGCGATGACCCGCACGCTGCCT
GCGGACTTCCGGCAACTGCGCACCCTTGTCGAGGACCGTCACCAGCGAGT
CGCCCGACGAGCGATGGCCGACGGTCCTACCAAAGCAGAGCTCGTCGAGG
ACTACCTCCACGAGCACGACCTCCTCGGCGACACCCCCGAGGGCCGCTCC
TACCAAGGGTTTTCGAGGCTGTTGACGTCCAAGCAGGCCCAATCCATCCC
GGACGACATCGATCAGATCCTCTCCCAGGAGTTCGCCCGCGAGCACATGA
CTGTGACCGAGCGGGCGCAGCTCGAGACGATGTTCTCGACCCTGCTCGCC
GCGCAACTTCGCGTACAGCAGAGCTACGTCAAATGGACCTCGTCACTGCG
GCGCTTCCTCACCAGGAGCACACACGAGAAGCACCGGCGCACCATCGATG
GTTCCGTCTCCGCGGAGTGGTTCCATGAGCGGGTCGCTGAGACCATCGAC
GCCTTGCCGAGCATGACGGGAGATCGTACTCCCGCCGAGCACTGTAAAAA
GTGGGTCGAGGACCGGTGGCTGGAAACGGAGATGGACGCTGGCCGCCTGC
GATACCGGCTCTCCGCCTACTCGCTGCGAGCCCTGCAGTTCGTCCGTGAG
ATCGTCGACGGTGAAACCACTGTCACCACGGCTCGGTTAGAGAGCATCGC
GCATGCCGTCCACACGCTCGCGGATATGACCAACCCCGACCGGCGCGTGC
AGGTTCGTCGGATCGATCGGGAGATCTCCCGGCTCAAGAAGCAGCGGGAC
GACATCAAGTCTGGTCGGACCCGGCTGTCTACCGTGGAGGAGCAGCAACA
GCAGCTGCGTGAGATCTTGGCGATGACCCGCACGCTGCCTGCGGACTTCC
GGCAACTGCGCACCCTTGTCGAGGACCGTCACCAGCGAGTCGCCCGACGA
GCGATGGCCGACGGTCCTACCAAAGCAGAGCTCGTCGAGGACTACCTCCA
CGAGCACGACCTCCTCGGCGACACCCCCGAGGGCCGCTCCTACCAAGGGT
TTTCGAGGCTGTTGACGTCCAAGCAGGCCCAATCCATCCCGGACGACATC
GATCAGATCCTCTCCCAGGAGTTCGCCCGCGAGCACATGACTGTGACCGA
GCGGGCGCAGCTCGAGACGATGTTCTCGACCCTGCTCGCCGCGCAACTTC
GCGTACAGCAGAGCTACGTCAAATGGACCTCGTCACTGCGGCGCTTCCTC
ACCAGGAGCACACACGAGAAGCACCGGCGC
back to top