Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 689 |
| Cds size | 669 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929029.113361-UTR-H-fluviatilis_contig101058:1..19 | 1622929029.113361-UTR-H-fluviatilis_contig101058:1..19 | Heribaudiella fluviatilis SAG_13_90 | UTR | H-fluviatilis_contig101058 2..19 + |
| 1691135156.2705703-UTR-H-fluviatilis_contig101058:1..19 | 1691135156.2705703-UTR-H-fluviatilis_contig101058:1..19 | Heribaudiella fluviatilis SAG_13_90 | UTR | H-fluviatilis_contig101058 2..19 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929029.1273396-CDS-H-fluviatilis_contig101058:19..688 | 1622929029.1273396-CDS-H-fluviatilis_contig101058:19..688 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig101058 20..688 + |
| 1691135156.2781777-CDS-H-fluviatilis_contig101058:19..688 | 1691135156.2781777-CDS-H-fluviatilis_contig101058:19..688 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig101058 20..688 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig101058.282.1 >prot_H-fluviatilis_contig101058.282.1 ID=prot_H-fluviatilis_contig101058.282.1|Name=mRNA_H-fluviatilis_contig101058.282.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=223bp
MAHQQRQQHALPPRHTLLTLQQYQARRKDKKDVTSAVDAPPASTKPGPAG
SCGELPRGATEFTHSQIWKWQPNRPRTTPNPRRSKSGGQVTVTYNKPSGS
CTATLPWPYHARGFGVINTYSSARRTNRENLRLRLSRQAAVTPSRGVAQS
HRRGSPVRERRRSTAPSPTSKPGFGKVKAVSGMKQAKDNERTGKPLRGTV
AVRATGSSGTTDTDRSPAGRIKK back to topmRNA from alignment at H-fluviatilis_contig101058:2..688+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig101058.282.1 ID=mRNA_H-fluviatilis_contig101058.282.1|Name=mRNA_H-fluviatilis_contig101058.282.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=687bp|location=Sequence derived from alignment at H-fluviatilis_contig101058:2..688+ (Heribaudiella fluviatilis SAG_13_90)
CGTGGGGTGCTGCGAACGATGGCACATCAACAGCGACAACAGCACGCCCT
GCCCCCAAGGCACACTCTCCTCACCCTGCAGCAATACCAGGCAAGAAGGA
AAGACAAGAAGGACGTTACGAGTGCAGTAGACGCTCCGCCAGCCAGTACA
AAGCCGGGACCAGCTGGATCTTGTGGAGAATTACCGCGCGGTGCAACGGA
ATTTACACACTCACAGATCTGGAAGTGGCAGCCGAATCGGCCGCGAACTA
CGCCAAATCCACGTCGCTCCAAGTCCGGGGGGCAGGTCACCGTCACCTAC
AACAAGCCTAGTGGCAGCTGCACCGCTACGCTCCCGTGGCCGTACCACGC
TCGAGGATTTGGAGTCATCAACACGTACTCATCCGCACGCCGCACTAACA
GGGAGAACCTTCGGCTCAGGCTTAGCAGGCAAGCGGCAGTTACACCGAGT
AGGGGGGTAGCACAGAGCCATCGTCGCGGAAGTCCGGTTCGAGAACGACG
CAGATCGACAGCGCCCTCGCCAACAAGCAAGCCCGGCTTCGGCAAGGTTA
AAGCAGTGAGCGGTATGAAGCAAGCGAAGGACAACGAGCGCACAGGGAAA
CCGCTAAGGGGAACGGTCGCGGTGCGGGCGACTGGCTCCAGTGGCACGAC
AGATACTGACCGATCGCCAGCTGGGCGCATTAAAAAA back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig101058:2..688+ >mRNA_H-fluviatilis_contig101058.282.1 ID=mRNA_H-fluviatilis_contig101058.282.1|Name=mRNA_H-fluviatilis_contig101058.282.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1338bp|location=Sequence derived from alignment at H-fluviatilis_contig101058:2..688+ (Heribaudiella fluviatilis SAG_13_90)
ATGGCACATCAACAGCGACAACAGCACGCCCTGCCCCCAAGGCACACTCT
CCTCACCCTGCAGCAATACCAGGCAAGAAGGAAAGACAAGAAGGACGTTA
CGAGTGCAGTAGACGCTCCGCCAGCCAGTACAAAGCCGGGACCAGCTGGA
TCTTGTGGAGAATTACCGCGCGGTGCAACGGAATTTACACACTCACAGAT
CTGGAAGTGGCAGCCGAATCGGCCGCGAACTACGCCAAATCCACGTCGCT
CCAAGTCCGGGGGGCAGGTCACCGTCACCTACAACAAGCCTAGTGGCAGC
TGCACCGCTACGCTCCCGTGGCCGTACCACGCTCGAGGATTTGGAGTCAT
CAACACGTACTCATCCGCACGCCGCACTAACAGGGAGAACCTTCGGCTCA
GGCTTAGCAGGCAAGCGGCAGTTACACCGAGTAGGGGGGTAGCACAGAGC
CATCGTCGCGGAAGTCCGGTTCGAGAACGACGCAGATCGACAGCGCCCTC
GCCAACAAGCAAGCCCGGCTTCGGCAAGGTTAAAGCAGTGAGCGGTATGA
AGCAAGCGAAGGACAACGAGCGCACAGGGAAACCGCTAAGGGGAACGGTC
GCGGTGCGGGCGACTGGCTCCAGTGGCACGACAGATACTGACCGATCGCC
AGCTGGGCGCATTAAAAAAATGGCACATCAACAGCGACAACAGCACGCCC
TGCCCCCAAGGCACACTCTCCTCACCCTGCAGCAATACCAGGCAAGAAGG
AAAGACAAGAAGGACGTTACGAGTGCAGTAGACGCTCCGCCAGCCAGTAC
AAAGCCGGGACCAGCTGGATCTTGTGGAGAATTACCGCGCGGTGCAACGG
AATTTACACACTCACAGATCTGGAAGTGGCAGCCGAATCGGCCGCGAACT
ACGCCAAATCCACGTCGCTCCAAGTCCGGGGGGCAGGTCACCGTCACCTA
CAACAAGCCTAGTGGCAGCTGCACCGCTACGCTCCCGTGGCCGTACCACG
CTCGAGGATTTGGAGTCATCAACACGTACTCATCCGCACGCCGCACTAAC
AGGGAGAACCTTCGGCTCAGGCTTAGCAGGCAAGCGGCAGTTACACCGAG
TAGGGGGGTAGCACAGAGCCATCGTCGCGGAAGTCCGGTTCGAGAACGAC
GCAGATCGACAGCGCCCTCGCCAACAAGCAAGCCCGGCTTCGGCAAGGTT
AAAGCAGTGAGCGGTATGAAGCAAGCGAAGGACAACGAGCGCACAGGGAA
ACCGCTAAGGGGAACGGTCGCGGTGCGGGCGACTGGCTCCAGTGGCACGA
CAGATACTGACCGATCGCCAGCTGGGCGCATTAAAAAA back to top
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