mRNA_H-fluviatilis_contig10104.278.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 165 bits (417), Expect = 5.460e-48 Identity = 71/105 (67.62%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMILRG 315 M GMAGSKR M+PEVC +PYNEKVDVYSF+IV+WE+C L+KPFAGM+ ADH+REV+ GG RPPLDP WP L+ LL+ACW EDP RPSI+EAR+ L+ + L G Sbjct: 234 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQIFLAG 338
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.070e-42 Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMILRG 315 M GMAGSKR MAPEVC + YNEKVDVYSF++V+W++CAL+KPFAGM+ ADH+ +VVQGG RPPLD WP +L LL+ACW P ARP++ +AR+ LR + G Sbjct: 193 MSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFAMG 297
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 130 bits (326), Expect = 5.750e-34 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMI 306 M G GS+R MAPEV + +PYNEK D+YS+ IV+WELCALQKPFAGM++ +H R+V + G RPPLD WP EL+ LL +CW + RP A+A E L +I Sbjct: 263 MTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARII 364
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A7S1ZVA0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZVA0_9STRA) HSP 1 Score: 118 bits (296), Expect = 5.080e-31 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMI 306 M G GS R MAPEV ++PYN+K DVYSF I++WEL A +KP+ GMN + + VV+G +RPP++ WP EL L++ CW D RPS E ERL AM+ Sbjct: 104 MSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPSFHEIVERLDAML 205
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A7S3XMV1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMV1_HETAK) HSP 1 Score: 112 bits (280), Expect = 4.360e-29 Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAA-DHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMI 306 + G GS R MAPEV +PYN VDVY ++++ WEL AL++PF + D F++VV+GG RPPLDPAWP + R+L ACW DP RPS E ++ ++ Sbjct: 77 LTGETGSLRYMAPEVAQQLPYNGAVDVYGWALLTWELMALRRPFHELKGVKDFFKQVVRGGLRPPLDPAWPEDFRELAAACWSPDPGRRPSAQELAALMKMLV 179
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A6V2JN82_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2JN82_9STRA) HSP 1 Score: 118 bits (296), Expect = 7.850e-29 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMI 306 M G GS R MAPEV ++PYN+K DVYSF I++WEL A +KP+ GMN + + VV+G +RPP++ WP EL L++ CW D RPS E ERL AM+ Sbjct: 546 MSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPSFHEIVERLDAML 647
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A835Z8G5_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G5_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.290e-28 Identity = 54/102 (52.94%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMI 306 M G GS R MAPEV + PYNEKVDV+S+S+V+WE+ L+KP+ GM + VV+G RPPL+ WP E DLL ACW ED ARPS A+ RL+ M+ Sbjct: 476 MTGETGSTRYMAPEVAESRPYNEKVDVHSYSMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLSACWSEDWRARPSFADICNRLQEML 577
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: B8CCK4_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCK4_THAPS) HSP 1 Score: 108 bits (269), Expect = 1.630e-28 Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERL 294 M G GS R MAPEV + PYN+K DVYSF I++WEL A +KP+ GMN + + VV+GG+RP L+ WP +L +L+++CWD + RP+ ++ E L Sbjct: 1 MSGETGSLRYMAPEVADCQPYNQKADVYSFGIILWELVAFKKPYDGMNRDEFYSRVVRGGERPLLNKKWPEDLSELMKSCWDAELVKRPNFSDIVEIL 98
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 115 bits (287), Expect = 4.050e-28 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMILR 312 M G GS R M PEV +PYNEK DVYSF +++WE+ +L++PF G+N + + V++GG+RPPL W A LR+L+ CWDED RP E + L + R Sbjct: 252 MTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQITHR 355
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 115 bits (287), Expect = 9.330e-28 Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 1 MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAADHFREVVQGGQRPPLDPAWPAELRDLLEACWDEDPHARPSIAEARERLRAMI 306 M G GS R MAPEV + PYNEKVDV+S+ +V+WE+ L+KP+ GM + VV+G RPPL+ WP E DLL ACW ED ARPS A+ RL+ M+ Sbjct: 414 MTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEML 515 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10104.278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10104.278.1 >prot_H-fluviatilis_contig10104.278.1 ID=prot_H-fluviatilis_contig10104.278.1|Name=mRNA_H-fluviatilis_contig10104.278.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=107bp MLGMAGSKRIMAPEVCNAIPYNEKVDVYSFSIVVWELCALQKPFAGMNAAback to top mRNA from alignment at H-fluviatilis_contig10104:4660..4980- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10104.278.1 ID=mRNA_H-fluviatilis_contig10104.278.1|Name=mRNA_H-fluviatilis_contig10104.278.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=321bp|location=Sequence derived from alignment at H-fluviatilis_contig10104:4660..4980- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10104:4660..4980- >mRNA_H-fluviatilis_contig10104.278.1 ID=mRNA_H-fluviatilis_contig10104.278.1|Name=mRNA_H-fluviatilis_contig10104.278.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=642bp|location=Sequence derived from alignment at H-fluviatilis_contig10104:4660..4980- (Heribaudiella fluviatilis SAG_13_90)back to top |