Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 291 |
| Cds size | 279 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929028.8137238-CDS-H-fluviatilis_contig101037:445..702 | 1622929028.8137238-CDS-H-fluviatilis_contig101037:445..702 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig101037 446..702 - |
| 1691135156.075024-CDS-H-fluviatilis_contig101037:445..702 | 1691135156.075024-CDS-H-fluviatilis_contig101037:445..702 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig101037 446..702 - |
| 1622929028.8238037-CDS-H-fluviatilis_contig101037:731..753 | 1622929028.8238037-CDS-H-fluviatilis_contig101037:731..753 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig101037 732..753 - |
| 1691135156.082867-CDS-H-fluviatilis_contig101037:731..753 | 1691135156.082867-CDS-H-fluviatilis_contig101037:731..753 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig101037 732..753 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929028.8340583-UTR-H-fluviatilis_contig101037:753..763 | 1622929028.8340583-UTR-H-fluviatilis_contig101037:753..763 | Heribaudiella fluviatilis SAG_13_90 | UTR | H-fluviatilis_contig101037 754..763 - |
| 1691135156.0914953-UTR-H-fluviatilis_contig101037:753..763 | 1691135156.0914953-UTR-H-fluviatilis_contig101037:753..763 | Heribaudiella fluviatilis SAG_13_90 | UTR | H-fluviatilis_contig101037 754..763 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig101037.277.1 >prot_H-fluviatilis_contig101037.277.1 ID=prot_H-fluviatilis_contig101037.277.1|Name=mRNA_H-fluviatilis_contig101037.277.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=93bp
MHPTRPSVSPRYFGGPRGSEPYRIAALARTGYCCRLPTRWYPFTLAFLLA
VAVPDDSTSHAPVGQSVQSAHSKSWPPANQQRLSPSSATISFS back to topmRNA from alignment at H-fluviatilis_contig101037:446..763- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig101037.277.1 ID=mRNA_H-fluviatilis_contig101037.277.1|Name=mRNA_H-fluviatilis_contig101037.277.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=318bp|location=Sequence derived from alignment at H-fluviatilis_contig101037:446..763- (Heribaudiella fluviatilis SAG_13_90)
TTTGCGTTCAATGCACCCAACGAGACCCTCAGGTAAATGCGGTGTTGTGC
ACTCCTACCAGTCTCGCCCCGATATTTCGGCGGTCCTCGCGGCTCTGAAC
CGTATCGAATTGCCGCGCTTGCGCGGACTGGGTATTGCTGCAGGCTCCCC
ACGCGGTGGTATCCATTCACACTCGCTTTCCTTCTCGCGGTCGCAGTCCC
TGATGACTCCACATCACATGCCCCAGTCGGGCAATCAGTCCAATCAGCCC
ACTCCAAGTCATGGCCACCAGCCAATCAACAAAGGCTTTCTCCATCCTCA
GCCACAATCTCATTCTCG back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig101037:446..763- >mRNA_H-fluviatilis_contig101037.277.1 ID=mRNA_H-fluviatilis_contig101037.277.1|Name=mRNA_H-fluviatilis_contig101037.277.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=558bp|location=Sequence derived from alignment at H-fluviatilis_contig101037:446..763- (Heribaudiella fluviatilis SAG_13_90)
ATGCACCCAACGAGACCCTCAGATGCACCCAACGAGACCCTCAGTCTCGC
CCCGATATTTCGGCGGTCCTCGCGGCTCTGAACCGTATCGAATTGCCGCG
CTTGCGCGGACTGGGTATTGCTGCAGGCTCCCCACGCGGTGGTATCCATT
CACACTCGCTTTCCTTCTCGCGGTCGCAGTCCCTGATGACTCCACATCAC
ATGCCCCAGTCGGGCAATCAGTCCAATCAGCCCACTCCAAGTCATGGCCA
CCAGCCAATCAACAAAGGCTTTCTCCATCCTCAGCCACAATCTCATTCTC
GTCTCGCCCCGATATTTCGGCGGTCCTCGCGGCTCTGAACCGTATCGAAT
TGCCGCGCTTGCGCGGACTGGGTATTGCTGCAGGCTCCCCACGCGGTGGT
ATCCATTCACACTCGCTTTCCTTCTCGCGGTCGCAGTCCCTGATGACTCC
ACATCACATGCCCCAGTCGGGCAATCAGTCCAATCAGCCCACTCCAAGTC
ATGGCCACCAGCCAATCAACAAAGGCTTTCTCCATCCTCAGCCACAATCT
CATTCTCG back to top
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