mRNA_H-fluviatilis_contig10100.272.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: D7FR93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR93_ECTSI) HSP 1 Score: 177 bits (448), Expect = 1.000e-55 Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 1 Query: 4 MMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFE 291
MMLAGMGLLNTMPMLAT+TVEKGLL +LGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHS F DLYRFFA SH YLGFE
Sbjct: 2 MMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFE 97
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.240e-49 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 1 Query: 4 MMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEV 294
MMLAGMGLLNTMPMLAT+TVEKGLL +LGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHS F DLYRFFA SH YLGFE+
Sbjct: 1738 MMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEL 1834
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.000e-45 Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 1 Query: 1 QMMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEV 294
QM+LAGMG+LNT+PMLAT+ VEKGL A+L V QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSF DLYRFFATSH YLGFE+
Sbjct: 1424 QMLLAGMGVLNTLPMLATLMVEKGLRAALITVGQVFVSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFDDLYRFFATSHFYLGFEL 1521
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.010e-45 Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 1 Query: 1 QMMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEV 294
QMMLAGMG+LNT+PMLAT+ VEKGL A+L V QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHS+F DLYRFFATSH YLGFE+
Sbjct: 1823 QMMLAGMGVLNTLPMLATLMVEKGLRAALVVVGQVFVSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSTFDDLYRFFATSHFYLGFEL 1920
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: A0A8J2T241_9STRA (1,3-beta-glucan synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T241_9STRA) HSP 1 Score: 144 bits (364), Expect = 4.880e-38 Identity = 71/98 (72.45%), Postives = 86/98 (87.76%), Query Frame = 1 Query: 1 QMMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEV 294
Q++LAG+GLLNT+P+LAT+ VE+GLLA+ +V QVF SGGP+YF+FHIQTRAHYF QTLLAGGA YRATGRGFVT H+SF + YRFFA SH+YLG E+
Sbjct: 1803 QVVLAGLGLLNTLPLLATLAVERGLLAATRDVAQVFASGGPLYFVFHIQTRAHYFMQTLLAGGATYRATGRGFVTTHNSFDEQYRFFAASHLYLGVEL 1900
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: F0YA81_AURAN (1,3-beta-glucan synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA81_AURAN) HSP 1 Score: 140 bits (353), Expect = 1.490e-36 Identity = 68/98 (69.39%), Postives = 85/98 (86.73%), Query Frame = 1 Query: 1 QMMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEV 294
Q++LAG+GLLNT+P+LAT+ VE+GL A+ +V QVF SGGP+YF+FHIQTRAHYF QT+LAGGA YRATGRGFVT HS+F + YRFFA SH++LG E+
Sbjct: 1899 QILLAGLGLLNTLPLLATLAVERGLWAAAKDVAQVFASGGPLYFIFHIQTRAHYFTQTILAGGATYRATGRGFVTRHSTFDEQYRFFAASHLHLGVEL 1996
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.300e-35 Identity = 66/98 (67.35%), Postives = 83/98 (84.69%), Query Frame = 1 Query: 1 QMMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEV 294
QM L GMG+L T+PM +T+ VEKG+ +++G VLQVF SGGP+YFMFHIQT+++YF QTLLAG A+YR TGRGFVT HSSF + +RFFA+SH YLGFE+
Sbjct: 1201 QMCLGGMGILQTVPMFSTLAVEKGVASAVGTVLQVFFSGGPLYFMFHIQTKSYYFIQTLLAGNAKYRPTGRGFVTRHSSFDENFRFFASSHFYLGFEL 1298
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA) HSP 1 Score: 136 bits (342), Expect = 4.520e-35 Identity = 64/98 (65.31%), Postives = 84/98 (85.71%), Query Frame = 1 Query: 1 QMMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEV 294
QM+L GMGL+NT+P+ AT+ VE+G AS+ E+ QVF++GGP++FMFHIQT+AHYF QT+L GGA+YRATGRGFVT HS F + +RFFA+SH+YLG E+
Sbjct: 1647 QMLLGGMGLMNTIPLFATLGVERGWWASMMEIFQVFVTGGPLHFMFHIQTKAHYFAQTILVGGAKYRATGRGFVTQHSPFAENFRFFASSHLYLGVEL 1744
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: A0A7S3H8Z7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Z7_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.530e-34 Identity = 62/100 (62.00%), Postives = 87/100 (87.00%), Query Frame = 1 Query: 1 QMMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEVHL 300
Q++L+GMG+L TMP+L T+TVEKG+LA++ E+ + LSGGP+YF+FHI+T+++YF QTL+AGGA+YR TGR FVT HSSF + +RFFA+SH+YLGFE+ +
Sbjct: 261 QLLLSGMGILQTMPLLITLTVEKGVLAAISEIGFMILSGGPLYFIFHIETKSYYFSQTLMAGGAKYRPTGRAFVTSHSSFDENFRFFASSHIYLGFEIFI 360
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Match: A0A7S0GHQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHQ8_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.160e-32 Identity = 58/98 (59.18%), Postives = 82/98 (83.67%), Query Frame = 1 Query: 1 QMMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFGDLYRFFATSHVYLGFEV 294
QM+L G+GLL T+P++AT+ VE+G LA++ ++ VF++GGP++FMFHIQT+AHY QT+L GGA+YR TGRGFVT H+ + +RFFA+SH+YLGFE+
Sbjct: 216 QMLLGGLGLLQTIPLIATLGVERGWLAAVQDIFSVFVTGGPLHFMFHIQTKAHYMAQTILVGGAKYRPTGRGFVTQHTPMDEQFRFFASSHLYLGFEL 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10100.272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10100.272.1 >prot_H-fluviatilis_contig10100.272.1 ID=prot_H-fluviatilis_contig10100.272.1|Name=mRNA_H-fluviatilis_contig10100.272.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=101bp MMLAGMGLLNTMPMLATITVEKGLLASLGEVLQVFLSGGPMYFMFHIQTRback to top mRNA from alignment at H-fluviatilis_contig10100:3620..4322+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10100.272.1 ID=mRNA_H-fluviatilis_contig10100.272.1|Name=mRNA_H-fluviatilis_contig10100.272.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=703bp|location=Sequence derived from alignment at H-fluviatilis_contig10100:3620..4322+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10100:3620..4322+ >mRNA_H-fluviatilis_contig10100.272.1 ID=mRNA_H-fluviatilis_contig10100.272.1|Name=mRNA_H-fluviatilis_contig10100.272.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=606bp|location=Sequence derived from alignment at H-fluviatilis_contig10100:3620..4322+ (Heribaudiella fluviatilis SAG_13_90)back to top |