mRNA_H-fluviatilis_contig100983.266.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: UPI000C03EA68 (MFS-type transporter SLC18B1-like isoform X3 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03EA68)

HSP 1 Score: 60.5 bits (145), Expect = 2.450e-8
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 1

Query:   16 VIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
            V+G  E  TGLGF+LGP +GGV+YS GGF+LPFIV GS++LS L +   I   D+
Sbjct:   45 VMGAMETFTGLGFMLGPPLGGVLYSAGGFKLPFIVLGSLLLSILPVVILILPRDQ 99

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BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: UPI0010FCCEBC (MFS-type transporter SLC18B1-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI0010FCCEBC)

HSP 1 Score: 60.5 bits (145), Expect = 2.810e-8
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 1

Query:   16 VIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
            V G  E  TGLGF+LGP +GGV+YS GGF+LPFIV G V+L+ + +   I  +DK
Sbjct:  192 VTGAMETFTGLGFMLGPPLGGVLYSAGGFKLPFIVMGGVLLAIVPVVMIILPMDK 246

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BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: UPI0009E47CBB (MFS-type transporter SLC18B1-like isoform X1 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E47CBB)

HSP 1 Score: 60.1 bits (144), Expect = 3.850e-8
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 1

Query:    1 TRTADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
            T    V G  E  TGLGF+LGP +GG++YS GGF+LPFIV G ++LS L +   I   D+
Sbjct:  203 TNIGKVTGAMETFTGLGFMLGPPLGGILYSAGGFKLPFIVMGGLLLSILPVVLVILPKDE 262

[Close]

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A0N5CZW4_THECL (MFS domain-containing protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CZW4_THECL)

HSP 1 Score: 59.3 bits (142), Expect = 6.830e-8
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1

Query:    4 RTADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLS-QLLLFFCIFAVDKRPGAD 195
            R A +IG  E   GLG+  GP +GG++Y  GGFQLPF+V G V+L   LL +F I  +D   G D
Sbjct:  127 RVATIIGILETFAGLGYTAGPPLGGMLYEIGGFQLPFLVLGLVLLFISLLAYFLIEKIDAMNGKD 191

[Close]

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A3M6UJX0_POCDA (MFS domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UJX0_POCDA)

HSP 1 Score: 58.5 bits (140), Expect = 1.330e-7
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 1

Query:   16 VIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
            V G  E  TGLGF+LGP +GGV+YS GGF+LPFIV G ++LS L +   I   D+
Sbjct:  191 VTGAMETFTGLGFMLGPPLGGVLYSAGGFKLPFIVLGGLLLSILPVVMLILPKDQ 245

[Close]

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A7M5X9V3_9CNID (MFS domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X9V3_9CNID)

HSP 1 Score: 58.2 bits (139), Expect = 1.830e-7
Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 1

Query:   16 VIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIF 168
            V G TE  TGLGF+ GP +GGV+Y +GGF++PF+V G +++   ++ FC+F
Sbjct:  216 VFGVTELFTGLGFMAGPALGGVLYQHGGFKMPFLVCGGLVI---VVLFCVF 263

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BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A2B4SAW4_STYPI (MFS-type transporter SLC18B1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SAW4_STYPI)

HSP 1 Score: 57.8 bits (138), Expect = 1.930e-7
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 1

Query:   31 EAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
            E  TGLGF+LGP +GGV+YS GGF+LPFIV GS++LS L +   I   D+
Sbjct:    2 ETFTGLGFMLGPPLGGVLYSAGGFKLPFIVLGSLLLSILPVVILILPRDQ 51

[Close]

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A1X7TYG0_AMPQE (MFS domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TYG0_AMPQE)

HSP 1 Score: 57.8 bits (138), Expect = 2.440e-7
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 1

Query:    1 TRTADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLF 156
            T+T  VIG  E  +G+GF +GP +GG +Y  GGF LPF+V+GS +L  ++LF
Sbjct:  168 TKTGTVIGMLELGSGIGFAIGPPLGGFLYKIGGFFLPFLVTGSTVLVFIILF 219

[Close]

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: R7UTW6_CAPTE (MFS domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UTW6_CAPTE)

HSP 1 Score: 57.8 bits (138), Expect = 2.470e-7
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 1

Query:   10 ADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDKR 183
            A V+G  E A G+G +LGP +GGV+Y  GGF +PF+V GS M+  + +  C+   ++R
Sbjct:  207 ATVLGLLETAVGIGLMLGPALGGVLYEVGGFMMPFLVLGSFMMLTVPISLCVLPREER 264

[Close]

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A369S6M1_9METZ (MFS-type transporter SLC18B1 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369S6M1_9METZ)

HSP 1 Score: 57.4 bits (137), Expect = 3.340e-7
Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 1

Query:   10 ADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFC 162
            A V+G  E A+ LG + GP++GG+ ++ GGF+LPFIVSGS++L+   + FC
Sbjct:  170 ATVVGVIEVASVLGLMAGPSLGGIFFNLGGFKLPFIVSGSLLLASSFISFC 220

The following BLAST results are available for this feature:

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot

BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
UPI000C03EA68	2.450e-8	56.36	MFS-type transporter SLC18B1-like isoform X3 n=1 T...	[more]
UPI0010FCCEBC	2.810e-8	54.55	MFS-type transporter SLC18B1-like isoform X1 n=2 T...	[more]
UPI0009E47CBB	3.850e-8	50.00	MFS-type transporter SLC18B1-like isoform X1 n=1 T...	[more]
A0A0N5CZW4_THECL	6.830e-8	47.69	MFS domain-containing protein n=1 Tax=Thelazia cal...	[more]
A0A3M6UJX0_POCDA	1.330e-7	54.55	MFS domain-containing protein n=2 Tax=Pocillopora ...	[more]
A0A7M5X9V3_9CNID	1.830e-7	49.02	MFS domain-containing protein n=1 Tax=Clytia hemis...	[more]
A0A2B4SAW4_STYPI	1.930e-7	58.00	MFS-type transporter SLC18B1 n=2 Tax=Stylophora pi...	[more]
A0A1X7TYG0_AMPQE	2.440e-7	50.00	MFS domain-containing protein n=1 Tax=Amphimedon q...	[more]
R7UTW6_CAPTE	2.470e-7	43.10	MFS domain-containing protein n=1 Tax=Capitella te...	[more]
A0A369S6M1_9METZ	3.340e-7	49.02	MFS-type transporter SLC18B1 n=1 Tax=Trichoplax sp...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-fluviatilis_contig100983	contig	H-fluviatilis_contig100983:77..527 -

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-fluviatilis_contig100983.266.1	prot_H-fluviatilis_contig100983.266.1	Heribaudiella fluviatilis SAG_13_90	polypeptide	H-fluviatilis_contig100983 79..527 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929027.7907252-CDS-H-fluviatilis_contig100983:78..311	1622929027.7907252-CDS-H-fluviatilis_contig100983:78..311	Heribaudiella fluviatilis SAG_13_90	CDS	H-fluviatilis_contig100983 79..311 -
1691135155.3835752-CDS-H-fluviatilis_contig100983:78..311	1691135155.3835752-CDS-H-fluviatilis_contig100983:78..311	Heribaudiella fluviatilis SAG_13_90	CDS	H-fluviatilis_contig100983 79..311 -
1622929027.8040383-CDS-H-fluviatilis_contig100983:354..399	1622929027.8040383-CDS-H-fluviatilis_contig100983:354..399	Heribaudiella fluviatilis SAG_13_90	CDS	H-fluviatilis_contig100983 355..399 -
1691135155.3953125-CDS-H-fluviatilis_contig100983:354..399	1691135155.3953125-CDS-H-fluviatilis_contig100983:354..399	Heribaudiella fluviatilis SAG_13_90	CDS	H-fluviatilis_contig100983 355..399 -
1622929027.8154001-CDS-H-fluviatilis_contig100983:424..475	1622929027.8154001-CDS-H-fluviatilis_contig100983:424..475	Heribaudiella fluviatilis SAG_13_90	CDS	H-fluviatilis_contig100983 425..475 -
1691135155.4069827-CDS-H-fluviatilis_contig100983:424..475	1691135155.4069827-CDS-H-fluviatilis_contig100983:424..475	Heribaudiella fluviatilis SAG_13_90	CDS	H-fluviatilis_contig100983 425..475 -
1622929027.8363004-CDS-H-fluviatilis_contig100983:505..527	1622929027.8363004-CDS-H-fluviatilis_contig100983:505..527	Heribaudiella fluviatilis SAG_13_90	CDS	H-fluviatilis_contig100983 506..527 -
1691135155.420394-CDS-H-fluviatilis_contig100983:505..527	1691135155.420394-CDS-H-fluviatilis_contig100983:505..527	Heribaudiella fluviatilis SAG_13_90	CDS	H-fluviatilis_contig100983 506..527 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-fluviatilis_contig100983:77..527-
coding sequence from alignment at H-fluviatilis_contig100983:77..527-

protein sequence of mRNA_H-fluviatilis_contig100983.266.1

>prot_H-fluviatilis_contig100983.266.1 ID=prot_H-fluviatilis_contig100983.266.1|Name=mRNA_H-fluviatilis_contig100983.266.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=117bp
TRTADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLL
LFFCIFAVDKRPGADCERAPPIPTNTDGVASEPVKGVSGASSAYVNGQRL
EVVSLQHLLAPSTSRPS

mRNA from alignment at H-fluviatilis_contig100983:77..527-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-fluviatilis_contig100983.266.1 ID=mRNA_H-fluviatilis_contig100983.266.1|Name=mRNA_H-fluviatilis_contig100983.266.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=451bp|location=Sequence derived from alignment at H-fluviatilis_contig100983:77..527- (Heribaudiella fluviatilis SAG_13_90)
ACAAGAACCGCAGATGTCATTGGTACCCGCTGAGCTGGACTTTCTCGCGC
AGGGTTCACTGAAGCAGCCACCGGGTTAGGATTCCTACTGGGGCCAACAA
TAGGTAATTGATGCGGTCTCATGCGCAGGCGGTGTCATGTACAGTAATGG
CGGGTTTCAGTTGCCGTTCATCGGTATGCAGCGTGGTTTACCTGACATGA
CCTATGTGCGTGTCAGTTTCGGGCTCCGTGATGTTATCGCAGCTGTTGCT
GTTCTTTTGCATCTTTGCGGTGGACAAACGGCCTGGAGCTGACTGTGAGC
GGGCACCGCCAATACCCACCAACACCGACGGTGTTGCTTCTGAACCTGTT
AAGGGGGTGTCCGGCGCATCCAGTGCATATGTCAACGGACAACGATTGGA
GGTGGTGTCGTTGCAGCACTTGCTTGCCCCCTCCACCTCCCGCCCTTCGG
G

Coding sequence (CDS) from alignment at H-fluviatilis_contig100983:77..527-

>mRNA_H-fluviatilis_contig100983.266.1 ID=mRNA_H-fluviatilis_contig100983.266.1|Name=mRNA_H-fluviatilis_contig100983.266.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=702bp|location=Sequence derived from alignment at H-fluviatilis_contig100983:77..527- (Heribaudiella fluviatilis SAG_13_90)
ACAAGAACCGCAGATGTCATTGACAAGAACCGCAGATGTCATTGGGTTCA
CTGAAGCAGCCACCGGGTTAGGATTCCTACTGGGGCCAACAATAGGGTTC
ACTGAAGCAGCCACCGGGTTAGGATTCCTACTGGGGCCAACAATAGGCGG
TGTCATGTACAGTAATGGCGGGTTTCAGTTGCCGTTCATCGGCGGTGTCA
TGTACAGTAATGGCGGGTTTCAGTTGCCGTTCATCGTTTCGGGCTCCGTG
ATGTTATCGCAGCTGTTGCTGTTCTTTTGCATCTTTGCGGTGGACAAACG
GCCTGGAGCTGACTGTGAGCGGGCACCGCCAATACCCACCAACACCGACG
GTGTTGCTTCTGAACCTGTTAAGGGGGTGTCCGGCGCATCCAGTGCATAT
GTCAACGGACAACGATTGGAGGTGGTGTCGTTGCAGCACTTGCTTGCCCC
CTCCACCTCCCGCCCTTCGTTTCGGGCTCCGTGATGTTATCGCAGCTGTT
GCTGTTCTTTTGCATCTTTGCGGTGGACAAACGGCCTGGAGCTGACTGTG
AGCGGGCACCGCCAATACCCACCAACACCGACGGTGTTGCTTCTGAACCT
GTTAAGGGGGTGTCCGGCGCATCCAGTGCATATGTCAACGGACAACGATT
GGAGGTGGTGTCGTTGCAGCACTTGCTTGCCCCCTCCACCTCCCGCCCTT
CG