mRNA_H-fluviatilis_contig100983.266.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: UPI000C03EA68 (MFS-type transporter SLC18B1-like isoform X3 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03EA68) HSP 1 Score: 60.5 bits (145), Expect = 2.450e-8 Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 16 VIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
V+G E TGLGF+LGP +GGV+YS GGF+LPFIV GS++LS L + I D+
Sbjct: 45 VMGAMETFTGLGFMLGPPLGGVLYSAGGFKLPFIVLGSLLLSILPVVILILPRDQ 99
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: UPI0010FCCEBC (MFS-type transporter SLC18B1-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI0010FCCEBC) HSP 1 Score: 60.5 bits (145), Expect = 2.810e-8 Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 16 VIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
V G E TGLGF+LGP +GGV+YS GGF+LPFIV G V+L+ + + I +DK
Sbjct: 192 VTGAMETFTGLGFMLGPPLGGVLYSAGGFKLPFIVMGGVLLAIVPVVMIILPMDK 246
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: UPI0009E47CBB (MFS-type transporter SLC18B1-like isoform X1 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E47CBB) HSP 1 Score: 60.1 bits (144), Expect = 3.850e-8 Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 1 Query: 1 TRTADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
T V G E TGLGF+LGP +GG++YS GGF+LPFIV G ++LS L + I D+
Sbjct: 203 TNIGKVTGAMETFTGLGFMLGPPLGGILYSAGGFKLPFIVMGGLLLSILPVVLVILPKDE 262
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A0N5CZW4_THECL (MFS domain-containing protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CZW4_THECL) HSP 1 Score: 59.3 bits (142), Expect = 6.830e-8 Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1 Query: 4 RTADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLS-QLLLFFCIFAVDKRPGAD 195
R A +IG E GLG+ GP +GG++Y GGFQLPF+V G V+L LL +F I +D G D
Sbjct: 127 RVATIIGILETFAGLGYTAGPPLGGMLYEIGGFQLPFLVLGLVLLFISLLAYFLIEKIDAMNGKD 191
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A3M6UJX0_POCDA (MFS domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UJX0_POCDA) HSP 1 Score: 58.5 bits (140), Expect = 1.330e-7 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 1 Query: 16 VIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
V G E TGLGF+LGP +GGV+YS GGF+LPFIV G ++LS L + I D+
Sbjct: 191 VTGAMETFTGLGFMLGPPLGGVLYSAGGFKLPFIVLGGLLLSILPVVMLILPKDQ 245
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A7M5X9V3_9CNID (MFS domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X9V3_9CNID) HSP 1 Score: 58.2 bits (139), Expect = 1.830e-7 Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 16 VIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIF 168
V G TE TGLGF+ GP +GGV+Y +GGF++PF+V G +++ ++ FC+F
Sbjct: 216 VFGVTELFTGLGFMAGPALGGVLYQHGGFKMPFLVCGGLVI---VVLFCVF 263
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A2B4SAW4_STYPI (MFS-type transporter SLC18B1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SAW4_STYPI) HSP 1 Score: 57.8 bits (138), Expect = 1.930e-7 Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 1 Query: 31 EAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDK 180
E TGLGF+LGP +GGV+YS GGF+LPFIV GS++LS L + I D+
Sbjct: 2 ETFTGLGFMLGPPLGGVLYSAGGFKLPFIVLGSLLLSILPVVILILPRDQ 51
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A1X7TYG0_AMPQE (MFS domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TYG0_AMPQE) HSP 1 Score: 57.8 bits (138), Expect = 2.440e-7 Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 1 TRTADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLF 156
T+T VIG E +G+GF +GP +GG +Y GGF LPF+V+GS +L ++LF
Sbjct: 168 TKTGTVIGMLELGSGIGFAIGPPLGGFLYKIGGFFLPFLVTGSTVLVFIILF 219
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: R7UTW6_CAPTE (MFS domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UTW6_CAPTE) HSP 1 Score: 57.8 bits (138), Expect = 2.470e-7 Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 10 ADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFCIFAVDKR 183
A V+G E A G+G +LGP +GGV+Y GGF +PF+V GS M+ + + C+ ++R
Sbjct: 207 ATVLGLLETAVGIGLMLGPALGGVLYEVGGFMMPFLVLGSFMMLTVPISLCVLPREER 264
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Match: A0A369S6M1_9METZ (MFS-type transporter SLC18B1 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369S6M1_9METZ) HSP 1 Score: 57.4 bits (137), Expect = 3.340e-7 Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 10 ADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLLFFC 162
A V+G E A+ LG + GP++GG+ ++ GGF+LPFIVSGS++L+ + FC
Sbjct: 170 ATVVGVIEVASVLGLMAGPSLGGIFFNLGGFKLPFIVSGSLLLASSFISFC 220 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100983.266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100983.266.1 >prot_H-fluviatilis_contig100983.266.1 ID=prot_H-fluviatilis_contig100983.266.1|Name=mRNA_H-fluviatilis_contig100983.266.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=117bp TRTADVIGFTEAATGLGFLLGPTIGGVMYSNGGFQLPFIVSGSVMLSQLLback to top mRNA from alignment at H-fluviatilis_contig100983:77..527- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100983.266.1 ID=mRNA_H-fluviatilis_contig100983.266.1|Name=mRNA_H-fluviatilis_contig100983.266.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=451bp|location=Sequence derived from alignment at H-fluviatilis_contig100983:77..527- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100983:77..527- >mRNA_H-fluviatilis_contig100983.266.1 ID=mRNA_H-fluviatilis_contig100983.266.1|Name=mRNA_H-fluviatilis_contig100983.266.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=702bp|location=Sequence derived from alignment at H-fluviatilis_contig100983:77..527- (Heribaudiella fluviatilis SAG_13_90)back to top |