mRNA_H-fluviatilis_contig100975.264.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A6H5L7J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J2_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.460e-21 Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 1 Query: 4 FKEEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSRV 150 FKE VGRAC++AVSELMLEF+TGGNVRFEEGRPGD+WFSSC DLVKSRV Sbjct: 487 FKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRV 535
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: D7FPT4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT4_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 1.460e-21 Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 1 Query: 4 FKEEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSRV 150 FKE VGRAC++AVSELMLEF+TGGNVRFEEGRPGD+WFSSC DLVKSRV Sbjct: 441 FKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRV 489
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A7S3IGL4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3IGL4_9SPIT) HSP 1 Score: 64.7 bits (156), Expect = 3.990e-11 Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 1 AFKEEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSR 147 + +++V +Q + LM E TGGN+RFEEG+P D WFSSC+DLV+SR Sbjct: 102 SLRKKVYDMSEQNIHRLMTELETGGNIRFEEGKPSDKWFSSCVDLVRSR 150
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A7S3SID7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SID7_9SPIT) HSP 1 Score: 62.4 bits (150), Expect = 1.320e-10 Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 10 EEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSRVV 153 +EV Q +++ L++E TGGN+R E+G+P D+W+SSC+DLV SR V Sbjct: 22 QEVCDLSQSSINRLLVELETGGNIRLEDGKPSDVWYSSCVDLVMSRFV 69
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A7S1HYF6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HYF6_9EUGL) HSP 1 Score: 62.8 bits (151), Expect = 3.500e-10 Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 1 Query: 31 QQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSR 147 Q ++S +M+E TGGN+R EEGRP D+WF SC+DL KSR Sbjct: 366 QHSISRMMIELQTGGNIRLEEGRPTDVWFKSCVDLFKSR 404
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A6G0WZM7_9STRA (Protein phosphatase 1 regulatory subunit 7 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZM7_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 8.940e-10 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 1 AFKEEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSR 147 A V ++ + LMLE +TGGN+R E+G+P D+W+ SC+DLVKSR Sbjct: 378 ALVSRVALLSEKTIQRLMLELHTGGNIRLEDGKPSDVWYVSCVDLVKSR 426
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A1R2D4U4_9CILI (Protein phosphatase 1 regulatory subunit 7 n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2D4U4_9CILI) HSP 1 Score: 61.2 bits (147), Expect = 1.220e-9 Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 1 AFKEEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSRVV 153 A K ++ +C++ +S L+ E TGGN+RFEEG+ D W++SC DLV SR + Sbjct: 359 ALKSKIETSCKENISRLITELETGGNIRFEEGKNTDNWYTSCADLVLSRYI 409
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A0M0JS56_9EUKA (Leucine-rich repeat-containing protein 9 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JS56_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 1.220e-9 Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 1 AFKEEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSRVV 153 A K V Q ++ LM+E TGGN+R E+G+P D+W+ SC+DLV SR V Sbjct: 380 ALKSLVCETSQTSICRLMVELETGGNIRLEDGKPADVWYMSCVDLVTSRFV 430
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A485LDQ7_9STRA (Protein phosphatase 1 regulatory subunit 7 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDQ7_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.670e-9 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 1 AFKEEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSR 147 A + A + + L+LE NTGGN+R E+G+P D+W+SSC+DL+ SR Sbjct: 407 ALNARLALASDKTIRRLVLELNTGGNIRLEDGKPSDVWYSSCVDLLTSR 455
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Match: A0A8K1CNS6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNS6_PYTOL) HSP 1 Score: 60.5 bits (145), Expect = 2.290e-9 Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 1 Query: 22 RACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSRV 150 R +VS L+LE TGGN+R E+G+P D W+SSC+DLV+SR+ Sbjct: 401 RTGDTSVSRLLLELETGGNIRLEDGKPTDPWYSSCVDLVRSRL 443 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100975.264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100975.264.1 >prot_H-fluviatilis_contig100975.264.1 ID=prot_H-fluviatilis_contig100975.264.1|Name=mRNA_H-fluviatilis_contig100975.264.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=51bp AFKEEVGRACQQAVSELMLEFNTGGNVRFEEGRPGDMWFSSCIDLVKSRVback to top mRNA from alignment at H-fluviatilis_contig100975:45..197- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100975.264.1 ID=mRNA_H-fluviatilis_contig100975.264.1|Name=mRNA_H-fluviatilis_contig100975.264.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=153bp|location=Sequence derived from alignment at H-fluviatilis_contig100975:45..197- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100975:45..197- >mRNA_H-fluviatilis_contig100975.264.1 ID=mRNA_H-fluviatilis_contig100975.264.1|Name=mRNA_H-fluviatilis_contig100975.264.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=306bp|location=Sequence derived from alignment at H-fluviatilis_contig100975:45..197- (Heribaudiella fluviatilis SAG_13_90)back to top |