Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 338 |
| Cds size | 336 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929018.2569983-CDS-H-fluviatilis_contig10066:86..422 | 1622929018.2569983-CDS-H-fluviatilis_contig10066:86..422 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10066 87..422 + |
| 1691135151.77042-CDS-H-fluviatilis_contig10066:86..422 | 1691135151.77042-CDS-H-fluviatilis_contig10066:86..422 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10066 87..422 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10066.200.1 >prot_H-fluviatilis_contig10066.200.1 ID=prot_H-fluviatilis_contig10066.200.1|Name=mRNA_H-fluviatilis_contig10066.200.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=112bp
MPFRYETPLLTGKRDTGTSSESKLTSVTNPLRTGQRTLDSYPQIFSFAHV
SRRDNLAATSTVQSLQIYYLQHHNRLPIVFHKQMMTQCITSERCIWMSDL
SPISISSSFPSP back to topmRNA from alignment at H-fluviatilis_contig10066:87..422+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig10066.200.1 ID=mRNA_H-fluviatilis_contig10066.200.1|Name=mRNA_H-fluviatilis_contig10066.200.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=336bp|location=Sequence derived from alignment at H-fluviatilis_contig10066:87..422+ (Heribaudiella fluviatilis SAG_13_90)
ATGCCATTTAGATATGAAACCCCTCTCCTAACCGGCAAAAGAGATACCGG
CACATCGTCAGAAAGCAAGCTAACATCCGTCACGAATCCCCTCAGGACAG
GGCAACGAACCTTAGACTCGTATCCTCAGATCTTTTCTTTTGCCCATGTC
TCCAGACGCGACAATCTAGCCGCGACTTCAACGGTCCAATCGCTACAAAT
ATATTATCTTCAACATCATAACCGCCTCCCTATAGTTTTCCACAAACAAA
TGATGACACAATGTATTACCTCGGAGAGATGCATATGGATGTCCGATCTC
TCCCCGATATCAATCTCCTCGTCATTCCCTTCTCCA back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig10066:87..422+ >mRNA_H-fluviatilis_contig10066.200.1 ID=mRNA_H-fluviatilis_contig10066.200.1|Name=mRNA_H-fluviatilis_contig10066.200.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=672bp|location=Sequence derived from alignment at H-fluviatilis_contig10066:87..422+ (Heribaudiella fluviatilis SAG_13_90)
ATGCCATTTAGATATGAAACCCCTCTCCTAACCGGCAAAAGAGATACCGG
CACATCGTCAGAAAGCAAGCTAACATCCGTCACGAATCCCCTCAGGACAG
GGCAACGAACCTTAGACTCGTATCCTCAGATCTTTTCTTTTGCCCATGTC
TCCAGACGCGACAATCTAGCCGCGACTTCAACGGTCCAATCGCTACAAAT
ATATTATCTTCAACATCATAACCGCCTCCCTATAGTTTTCCACAAACAAA
TGATGACACAATGTATTACCTCGGAGAGATGCATATGGATGTCCGATCTC
TCCCCGATATCAATCTCCTCGTCATTCCCTTCTCCAATGCCATTTAGATA
TGAAACCCCTCTCCTAACCGGCAAAAGAGATACCGGCACATCGTCAGAAA
GCAAGCTAACATCCGTCACGAATCCCCTCAGGACAGGGCAACGAACCTTA
GACTCGTATCCTCAGATCTTTTCTTTTGCCCATGTCTCCAGACGCGACAA
TCTAGCCGCGACTTCAACGGTCCAATCGCTACAAATATATTATCTTCAAC
ATCATAACCGCCTCCCTATAGTTTTCCACAAACAAATGATGACACAATGT
ATTACCTCGGAGAGATGCATATGGATGTCCGATCTCTCCCCGATATCAAT
CTCCTCGTCATTCCCTTCTCCA back to top
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