mRNA_H-fluviatilis_contig100641.195.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: R1E9A4_EMIHU (UBC core domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=R1E9A4_EMIHU) HSP 1 Score: 200 bits (509), Expect = 6.160e-63 Identity = 86/146 (58.90%), Postives = 115/146 (78.77%), Query Frame = 1 Query: 58 AANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYA 495 AA KRINKEL++L+K PP C A VGDD+FHW +++MGP +SPYE G+F L+I FP DYPFKPPKV F TK+YHCNVN G +C+ IL+ +WSPA+++ KVL + LL +PNPDDPL+ +IA+ +K+ + +D+TAKEWT+KYA Sbjct: 2 AATKRINKELQDLTKDPPSTCSAGPVGDDLFHWQSTIMGPKESPYEGGIFFLNINFPSDYPFKPPKVTFTTKIYHCNVNSNGSICLDILQSQWSPALTVSKVLLSVCSLLTDPNPDDPLVPEIARLYKQDRGKHDETAKEWTRKYA 147
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: A0A6A7G3H5_9CRUS (Ubiquitin-conjugating enzyme 2 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G3H5_9CRUS) HSP 1 Score: 200 bits (509), Expect = 1.040e-62 Identity = 87/146 (59.59%), Postives = 114/146 (78.08%), Query Frame = 1 Query: 61 ANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYAQ 498 A KRINKEL++L K PP C A +GDD+F W A++MGPP SPY+ GVF L+I FP DYPFKPPKV F+TK+YHCNVN+KG +C+ ILKD WSPA+++ KVL + LL +PNPDDPL+ +IA +FK ++ +D+ A EWT+K+AQ Sbjct: 19 ALKRINKELQDLGKDPPANCSAGPIGDDLFRWQATIMGPPDSPYDGGVFFLEIHFPNDYPFKPPKVKFQTKIYHCNVNDKGGICLDILKDNWSPALTISKVLLSICSLLNDPNPDDPLVPEIANKFKNNRPQHDRDAMEWTRKFAQ 164
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: A0A3P3YD54_PLABS (UBC core domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YD54_PLABS) HSP 1 Score: 198 bits (504), Expect = 3.430e-62 Identity = 86/144 (59.72%), Postives = 112/144 (77.78%), Query Frame = 1 Query: 67 KRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYAQ 498 KRINKEL ++ PP C A GDD++ W A++MGPP SPYE GVF L I+FP+DYPFKPPKV F+TK+YHCNVN+KG +C+ ILKD WSPA+++ KVL + LL +PNPDDPL+ +IA FK ++K++D+ A EWT+KYAQ Sbjct: 4 KRINKELIDMGNDPPANCSAGPTGDDLYRWQATIMGPPNSPYEGGVFFLHIEFPQDYPFKPPKVKFQTKIYHCNVNDKGGICLDILKDNWSPALTISKVLLSICSLLTDPNPDDPLVPEIANLFKTNRKEHDRIAAEWTRKYAQ 147
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: A0A7S0LRQ9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LRQ9_9EUKA) HSP 1 Score: 198 bits (503), Expect = 1.250e-61 Identity = 85/148 (57.43%), Postives = 113/148 (76.35%), Query Frame = 1 Query: 52 MAAANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYA 495 M +A KRINKEL +L+K PP C A VGDD+FHW +++MGP +SPYE G+F L+I FP DYPFKPPKV F TK++HCNVN G +C+ IL+ +WSPA+++ KVL + LL +PNPDDPL+ +IA+ +K ++ +D TAKEWT KYA Sbjct: 28 MGSATKRINKELADLTKDPPSSCSAGPVGDDLFHWQSTIMGPKESPYEGGIFFLNIHFPTDYPFKPPKVQFTTKIWHCNVNNNGSICLDILQSQWSPALTISKVLLSVCSLLTDPNPDDPLVPEIARMYKSNRVQHDSTAKEWTNKYA 175
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: A0A7S4C240_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C240_CHRCT) HSP 1 Score: 197 bits (500), Expect = 2.260e-61 Identity = 86/146 (58.90%), Postives = 112/146 (76.71%), Query Frame = 1 Query: 58 AANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYA 495 +A KRINKEL +LSK PP C A VGDD+FHW +++MGP SPY+ G+F L+I FP DYPFKPPKV F+TK+YHCNVN G +C+ IL+ +WSPA+++ KVL + LL +PNPDDPL+ +IAK +K + +D TAKEWT+KYA Sbjct: 16 SATKRINKELSDLSKDPPSTCSAGPVGDDLFHWQSTIMGPKDSPYDGGIFFLNIHFPTDYPFKPPKVQFQTKIYHCNVNGNGSICLDILQSQWSPALTISKVLLSVCSLLTDPNPDDPLVPEIAKLYKSDRAKHDATAKEWTRKYA 161
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: L8GSE6_ACACA (Ubiquitinconjugating enzyme E2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSE6_ACACA) HSP 1 Score: 196 bits (498), Expect = 2.800e-61 Identity = 87/145 (60.00%), Postives = 111/145 (76.55%), Query Frame = 1 Query: 61 ANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYA 495 A KRINKEL++L + PP C A VGDD+FHWTA++MGPP SPY+ GVF L+I FP DYPFKPPKV F TK+YH NVN G +C+ ILKD+WSPA+++ KVL + LL +PNPDDPL+ +IA +K + Y+ TA+EWT+KYA Sbjct: 2 ALKRINKELQDLQRDPPTNCSAGPVGDDLFHWTATIMGPPDSPYQGGVFFLNIHFPTDYPFKPPKVSFTTKIYHPNVNGNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRSRYENTAREWTRKYA 146
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: A0A6A7G9C6_9CRUS (Ubiquitin-conjugating enzyme 2 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G9C6_9CRUS) HSP 1 Score: 195 bits (496), Expect = 5.640e-61 Identity = 85/146 (58.22%), Postives = 115/146 (78.77%), Query Frame = 1 Query: 61 ANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYAQ 498 A+KRINKEL++L + PP C A VGD++F W A++MGPP SPY GVF L+I FP+DYPFKPPK F+TK+YHCNVN+KG +C+ ILKD WSPA+++ KVL + LL +PNPDDPL+ +IA ++K ++ D+D+ A EWT+K+AQ Sbjct: 2 ASKRINKELQDLGRDPPANCSAGPVGDNLFKWQATIMGPPDSPYAGGVFFLEIVFPQDYPFKPPKCRFQTKIYHCNVNDKGGICLDILKDNWSPALTIAKVLLSICSLLTDPNPDDPLVPEIANKYKTNRVDHDRYAAEWTRKFAQ 147
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: B8C0C0_THAPS (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8C0C0_THAPS) HSP 1 Score: 194 bits (493), Expect = 1.610e-60 Identity = 86/143 (60.14%), Postives = 107/143 (74.83%), Query Frame = 1 Query: 67 KRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYA 495 KRINKEL +L K PP C A VGDD+FHW A++MGP +SPY GVF LDI FP DYPFKPPKV F T++YHCN+N G +C+ ILKD+WSPA+++ KVL + LL +PNPDDPL+ DIA+ K + +D TA+EWT KYA Sbjct: 4 KRINKELVDLGKDPPANCSAGPVGDDMFHWQATIMGPDESPYAGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQLLKTDRARHDSTAREWTSKYA 146
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: A0A8B6EPA5_MYTGA (Ubiquitin-conjugating enzyme E2 D n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EPA5_MYTGA) HSP 1 Score: 194 bits (492), Expect = 2.290e-60 Identity = 85/145 (58.62%), Postives = 110/145 (75.86%), Query Frame = 1 Query: 61 ANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYA 495 A KR+NKEL++++ PP GC A VGDD+F W ASL GP SPY+ G+F L +QFP DYPFKPPKV FKTK+YH N+N G +C+ IL+ +WSPA+++ K+L L L++EPNPDDPLM DIAK FK +K Y + A+EWT+KYA Sbjct: 2 ALKRLNKELQDITTDPPPGCSAGPVGDDLFKWEASLTGPEDSPYKDGIFFLSVQFPTDYPFKPPKVGFKTKIYHPNINSSGAICLDILRSQWSPALTVSKILLSLHALMSEPNPDDPLMPDIAKLFKTDRKKYMQNAREWTRKYA 146
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Match: T1FM60_HELRO (UBC core domain-containing protein n=16 Tax=Protostomia TaxID=33317 RepID=T1FM60_HELRO) HSP 1 Score: 193 bits (491), Expect = 3.240e-60 Identity = 83/145 (57.24%), Postives = 111/145 (76.55%), Query Frame = 1 Query: 61 ANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGVFLLDIQFPKDYPFKPPKVLFKTKVYHCNVNEKGELCIPILKDEWSPAISMDKVLTGLRGLLAEPNPDDPLMADIAKQFKESKKDYDKTAKEWTQKYA 495 A KRINKEL+++SK PP GC A VGDD+FHW A++MGPP SPY+ GVF L I FP DYPFKPPK+ F T++YH N+N G +C+ IL+ +WSPA+++ KVL + LL +PNPDDPL+ +IA+ +K K+ Y++ AK+WT KYA Sbjct: 2 ALKRINKELQDMSKDPPAGCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKLAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLTDPNPDDPLVPEIARMYKTDKERYNQMAKDWTHKYA 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100641.195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100641.195.1 >prot_H-fluviatilis_contig100641.195.1 ID=prot_H-fluviatilis_contig100641.195.1|Name=mRNA_H-fluviatilis_contig100641.195.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=150bp MAAANKRINKELENLSKTPPEGCQANIVGDDIFHWTASLMGPPKSPYEKGback to top mRNA from alignment at H-fluviatilis_contig100641:97..851+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100641.195.1 ID=mRNA_H-fluviatilis_contig100641.195.1|Name=mRNA_H-fluviatilis_contig100641.195.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=755bp|location=Sequence derived from alignment at H-fluviatilis_contig100641:97..851+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100641:97..851+ >mRNA_H-fluviatilis_contig100641.195.1 ID=mRNA_H-fluviatilis_contig100641.195.1|Name=mRNA_H-fluviatilis_contig100641.195.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=900bp|location=Sequence derived from alignment at H-fluviatilis_contig100641:97..851+ (Heribaudiella fluviatilis SAG_13_90)back to top |