mRNA_H-fluviatilis_contig100576.183.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100576.183.1 vs. uniprot
Match: A0A2R5GY31_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GY31_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.280e-14 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 1 WGERSTSLPDFWQRVRRACGTGAMRGRILKVLKIVQKNRVVRFDIYSRREHARRITNLLK-SAQHRYGWYVKEHRA--AQQHCAQRAGYVTIGTL--------NVHSVRGKQYGLRHMLERYDVGCLALQETMLRAADW 384
WGE S S+ FW R+ +R RILKV K++Q R +RFD+Y A RI +LL+ + + R+ W+ + HR ++H A G L N++ +R K+ L +L+ ALQET+LRA DW
Sbjct: 142 WGETSPSMACFWARLEYCVPNAQVRRRILKVNKVLQAERELRFDVYVVSTEAARILDLLRRNGRRRFDWHTRLHRPYHEREHPGDAAAAPAAGALKDLRLLAWNINGLRRKREDLASLLQTTVPHVAALQETLLRATDW 280 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100576.183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100576.183.1 >prot_H-fluviatilis_contig100576.183.1 ID=prot_H-fluviatilis_contig100576.183.1|Name=mRNA_H-fluviatilis_contig100576.183.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=128bp WGERSTSLPDFWQRVRRACGTGAMRGRILKVLKIVQKNRVVRFDIYSRREback to top mRNA from alignment at H-fluviatilis_contig100576:159..735+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100576.183.1 ID=mRNA_H-fluviatilis_contig100576.183.1|Name=mRNA_H-fluviatilis_contig100576.183.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=577bp|location=Sequence derived from alignment at H-fluviatilis_contig100576:159..735+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100576:159..735+ >mRNA_H-fluviatilis_contig100576.183.1 ID=mRNA_H-fluviatilis_contig100576.183.1|Name=mRNA_H-fluviatilis_contig100576.183.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=768bp|location=Sequence derived from alignment at H-fluviatilis_contig100576:159..735+ (Heribaudiella fluviatilis SAG_13_90)back to top |