Homology
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
A0A6H5KKY0_9PHAE (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY0_9PHAE)
HSP 1 Score: 366 bits (940), Expect = 3.360e-113
Identity = 211/353 (59.77%), Postives = 245/353 (69.41%), Query Frame = 1
Query: 1 VMVLLHEWMVNRGELGAAEGLGMSLRACCPLSRGAEAFVEAHLQRVRLLRAQSR---------WNEAVKSASALAKLCDARGMAPQYARVLLELSRARLGAEPLSPVGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGSTRRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITEFSLSAEKTRDADSTFRADNAGGAGESE------GREXXXXXXXXXEGQRERQWGGDGDSVAVGQGGKAELLHRSAEYLDKAIVLFKRCHDFAGLRECWCLKARVCGELVEQGGPLENEARQA--RDESAEAFLAVLEAGARALASTPPGLKIGPEEIKRYVARATSDVPW 1008
VMVLLHEWMVNRGE AAEGLGMSLRACCPLS+GAE+F+EAHLQ+VRLLRAQ R W EAVK+AS LAKL D RG+APQYAR+LLELSRA LGAEP SPVGALP+ALRCLAVC+SY+LDAIHA+AMTHLAEVHLR+GSTRRARILL+ACLG LL++A VQ+Q EAWLAMA+CDI E SL GG G+S G E X GQ GG A + + E+L R+ LD+AI KRCHDFAGLREC LKARVC ELV ++ R R+ S+ FLA+ +A ARALA PGLKIGP E++RY++ + VPW
Sbjct: 631 VMVLLHEWMVNRGEFRAAEGLGMSLRACCPLSQGAESFIEAHLQKVRLLRAQGRQVIPQPPVRWAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAEVHLRMGSTRRARILLQACLGQLLASAPVQSQGEAWLAMARCDIAEVSL-----------------GGGGQSSTAVPGAGXEGGVTIEGRXXGQG--TGGGPAAPAATRRARREEVLRRAVLNLDRAIAKLKRCHDFAGLRECLYLKARVCAELVSAHEEASDKYRATVERNASSRDFLAISKAVARALACPSPGLKIGPAEVRRYMSASMESVPW 964
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
D7FTQ0_ECTSI (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ0_ECTSI)
HSP 1 Score: 293 bits (751), Expect = 2.220e-87
Identity = 185/340 (54.41%), Postives = 217/340 (63.82%), Query Frame = 1
Query: 1 VMVLLHEWMVNRGELGAAEGLGMSLRACCPLSRGAEAFVEAHLQRVRLLRAQSRWNEAVKSASALAKLCDARGMAPQYARVLLELSRARLGAEPLSPVGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGSTRRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITEFSLSAEKTRDADSTFRADNAGGAG--ESEGREXXXXXXXXXEGQRERQWGGDGDSVAVGQGGKAELLHRSAEYLDKAIVLFKRCHDFAGLRECWCLKARVCGELVEQGGPLENEARQA--RDESAEAFLAVLEAGARALASTPPGLKIGPEEIKRYVARATSDVPW 1008
VMVLLHEWMVNRGE AAEG W EAVK+AS LAKL D RG+APQYAR+LLELSRA LGAEP SPVGALP+ALRCLAVC+SY+LDAIHA+AMTHLA+VHLR+GSTRRARILL+ACLG LL++A VQ+Q EAWLAMA+CDI E SL ++ AGG G E XXXXXXX X A G+ + E+L R+ LD+AI KRCHDFAGLREC LKARVC ELV + ++ R R+ S+ FLAV +A ARALA PGLKIGP E++RY++ + VPW
Sbjct: 458 VMVLLHEWMVNRGEFRAAEG----------------------------------WAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAQVHLRMGSTRRARILLQACLGQLLASAPVQSQGEAWLAMARCDIAEVSLGGG----GQTSTAVPEAGGEGGVTIEXXXXXXXXXXRXXXXXPAAPAALSGPAATGRVRRGEVLRRAVLNLDRAIAKLKRCHDFAGLRECLYLKARVCAELVSEHEEASDKYRATVERNASSREFLAVSKAVARALACPSPGLKIGPAEVRRYMSASVESVPW 759
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
F0Y6Q2_AURAN (Anaphase-promoting complex subunit 5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q2_AURAN)
HSP 1 Score: 117 bits (292), Expect = 6.760e-24
Identity = 70/174 (40.23%), Postives = 100/174 (57.47%), Query Frame = 1
Query: 7 VLLHEWMVNRGELGAAEGLGMSLRACCPLSR--GAEAFVEAHLQRVRLLRAQSRWNEAVKSASALAKLCDARGMAPQYARVLLELSRARLGAEPLSPVGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGSTRRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITE 522
+L EW ++RG AE L +L P+ G EA VEA RLL + RW AVK+ + L + C +G+ Q A L+ + RL A P SPV AL ALRCLA+C+ ++LD +HA A L V++ LGS +AR L++ L LL ++ VQ Q +AW A+A+ ++ E
Sbjct: 678 LLKFEWALHRGANKRAEALASALLGVSPVQADLGPEAHVEAVRASARLLARRERWERAVKTMNELERYCGRKGLWAQQAECLMLGAHWRLDACPQSPVPALSPALRCLALCEKFALDHLHAEAAFALGRVNVYLGSVAKARSLIQGALPKLLGHSHVQLQGDAWYALAETELRE 851
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
A0A7S4E887_9STRA (Anaphase-promoting complex subunit 5 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E887_9STRA)
HSP 1 Score: 95.9 bits (237), Expect = 4.150e-17
Identity = 62/176 (35.23%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 7 VLLHEWMVNRGELGAAEGLGMSLRACCPLSRGAEAFVEAHLQRVR----LLRAQSRWNEAVKSASALAKLCDARGMAPQYARVLLELSRARLGAEPLSPVGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGSTRRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITE 522
+L EW V+R L A L +L P R ++ VE H++ +R L A+ + AVK A+ L ++C RG+ A++L + S+ L P PV A+ ALR LA+C+ ++LDA+HA A LA V L LG+ +AR + C +L + V Q + W A+A+C++ E
Sbjct: 673 LLRFEWAVHRHALRRAAALHEALLGVSP--RQSDYDVECHVEALRCDLRLSVARDDYERAVKGAAKLERICGNRGLWALQAKLLCDRSKWLLDGCPQEPVPAMNPALRALALCEQWALDALHAEATLRLALVQLGLGNIPKARDAFQQCQLKILEQSHVDVQGDLWYALAQCELEE 846
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
A0A4S4EPR2_CAMSI (Anaphase-promoting complex subunit 5 n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4EPR2_CAMSI)
HSP 1 Score: 76.6 bits (187), Expect = 5.480e-11
Identity = 60/179 (33.52%), Postives = 95/179 (53.07%), Query Frame = 1
Query: 10 LLHEWMVNRGELGAAEGLGMSLRACCPLSRGAEAFV--EAHLQRVRLLRAQSRWNEAVKSASALAKLCDARGMAPQYARVLLELSRARLGAEPLSPVGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGS--TRRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITEFSLS 534
LLHE ++RG L A+ L L G + + EA + R L A +++++A A +L +C GM + A VLL L A + + V +PYAL L+ C S++LD + A+A LAE+ L LGS +RA L+ L +L + ++ +A A++A AKC +++ S S
Sbjct: 723 LLHEHALHRGHLKLAQQLCDELGVLASSVTGVDMELKKEASFRHARTLLAANQFSQAAAVAHSLFCMCYKFGMQVENASVLLLL--AEIHKRSGNAVLGIPYALASLSFCQSFNLDLLKASATLTLAELWLSLGSDHAKRASTLMHCALPIILGHGGLELRARAFIAEAKCYLSDPSFS 899
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
A0A7S4QWD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWD6_9STRA)
HSP 1 Score: 72.0 bits (175), Expect = 1.100e-9
Identity = 54/188 (28.72%), Postives = 86/188 (45.74%), Query Frame = 1
Query: 292 VGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGSTRRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITEFSLSAEKTRDADSTFRADNAGGAGESEGREXXXXXXXXXEGQRERQWGGDGDSVAVGQGGKAEL--LHRSA-EYLDKAIVLFKRCHDFAGLRECWCLKARVCGELVEQGGP 846
+ ALP+ L CL++C+S S+D+IHA+A+ LA VH RL + ++ R ++ +C+ LL + V Q E + +AKC + E S + D + R GG + + K +L LHR A L+++ LF+R D LRE L+AR+ + P
Sbjct: 307 LSALPFLLECLSLCESQSIDSIHASALCVLAGVHSRLDNYQKGRAMVLSCMPSLLCHGHVWFQGEGYFIIAKCYLRESSDFVVSYNNKDDSRRGKEGGGG--------------------------------MKKSYKKQLMKLHRLALSNLNESKTLFRRVQDIERLREVHYLRARIYDSMYNLTDP 462
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
A0A6A4LK45_9ERIC (Anaphase-promoting complex subunit 5 (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LK45_9ERIC)
HSP 1 Score: 68.2 bits (165), Expect = 2.380e-8
Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = 1
Query: 10 LLHEWMVNRGELGAAEGLGMSLRACCPLSRGA--EAFVEAHLQRVRLLRAQSRWNEAVKSASALAKLCDARGMAPQYARVLLELSRARLGAEPLSPVGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGST--RRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITEFSLS 534
LLHE ++ G L A L L G E EA L+R R L A ++++A A +L +C + A +LL L A + + V +P AL L+ C S++LD + A+A LAE+ L LGS +RA L+ L +L + ++ +A A++A AKC +++ S S
Sbjct: 657 LLHERALHWGHLKLAHQLCDELGVLASSVTGVDEELKTEASLRRARTLLAAKQFSQAAAVAHSLFCMCHKLNKQVENAMILLLL--AEIHKRSGNAVLGIPCALASLSFCQSFNLDLLKASATLTLAELWLSLGSNHAKRASTLVHRSLPMILGHGGLELRARAFIAEAKCYLSDPSFS 833
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
A0A067EKY8_CITSI (Anaphase-promoting complex subunit 5 n=7 Tax=Citrus TaxID=2706 RepID=A0A067EKY8_CITSI)
HSP 1 Score: 65.1 bits (157), Expect = 2.260e-7
Identity = 56/186 (30.11%), Postives = 95/186 (51.08%), Query Frame = 1
Query: 10 LLHEWMVNRGELGAAEGLGMSLRACCPLSRGAEAFV--EAHLQRVRLLRAQSRWNEAVKSASALAKLCDARGMAPQYARVLLELSRARLGAEPLSPVGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGST--RRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITEFSLSAEKTRDA 555
LLHE ++RG L A+ + L G + + EA L+ R L A ++++EA A +L +C + + A VLL L A + + + V +PYAL L+ C +LD + A+A LAE+ L G + A L++ L +L + ++ +A A++A AKC +++ S S + +A
Sbjct: 670 LLHERSLHRGHLKLAQKVCDELGVMASSVTGVDMDLKTEASLRHARTLLAANQFSEAAAVAHSLFCMCYKFNLQVENASVLLLL--AEIHKKSGNAVLGIPYALASLSFCQLLNLDLLKASATLTLAELWLSFGPNHAKMASNLIQQALPLILGHGGLELRARAFIAEAKCLLSDPSFSVSQNPEA 853
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Match:
A0A7R9ZRD1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRD1_9STRA)
HSP 1 Score: 57.4 bits (137), Expect = 1.170e-5
Identity = 57/198 (28.79%), Postives = 88/198 (44.44%), Query Frame = 1
Query: 235 ARVLLELSRARLGAEPLSPVGALPYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGSTRRARILLRACLGHLLSNASVQTQAEAWLAMAKCDITEFSLSAEKTRDADSTFRADNAGGAGESEGREXXXXXXXXXEGQRERQWGGDGDSVAVGQGGKAELLHRSAEYLDKAIVLFKRCHDFAGLRECWCLKARVCGEL 828
A +LL S +L A + AL L+ L + +D IHATA++ LA + L++G +RA LL++C+ L+ + V Q EA L A C + LS K D+ GA S QR+R + L+ + +L +A LF++C D L++ L+ARVC +L
Sbjct: 22 ADLLLRWSELQLEASSTG-MAALKSLLQVLTLSKHDEMDGIHATALSLLARLFLKMGHAKRALALLKSCINQLVQHEHVHYQGEAMLTYAMCYMQ---LSNPKN---DAWMEVTGERGARPSSN-------------QRKR-----------------DRLN-ALSFLRRAQELFEKCQDIHKLKQIHYLQARVCNDL 181
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10048.157.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 9
0 1 Expect = 3.36e-113 / Id = 59.77 Expect = 2.22e-87 / Id = 54.41 Expect = 6.76e-24 / Id = 40.23 Expect = 4.15e-17 / Id = 35.23 Expect = 5.48e-11 / Id = 33.52 Expect = 1.10e-9 / Id = 28.72 Expect = 2.38e-8 / Id = 32.40 Expect = 2.26e-7 / Id = 30.11 Expect = 1.17e-5 / Id = 28.79 Sequence A0A6H5KKY0_9PHAE D7FTQ0_ECTSI F0Y6Q2_AURAN A0A7S4E887_9STRA A0A4S4EPR2_CAMSI A0A7S4QWD6_9STRA A0A6A4LK45_9ERIC A0A067EKY8_CITSI A0A7R9ZRD1_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 295.4
Seed ortholog evalue 3.3e-77
Seed eggNOG ortholog 2880.D7FTQ0
Preferred name APC5
KEGG ko ko:K03352
KEGG Pathway ko04110,ko04111,ko04113,ko04114,ko04120,ko04657,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04657,map04914,map05166
KEGG Module M00389
GOs GO:0000151,GO:0000152,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005680,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0016567,GO:0019538,GO:0019941,GO:0030071,GO:0030163,GO:0031145,GO:0031331,GO:0031461,GO:0032270,GO:0032436,GO:0032446,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070647,GO:0071704,GO:0090068,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905818,GO:1905820,GO:1990234,GO:2001252
EggNOG free text desc. protein K11-linked ubiquitination
EggNOG OGs KOG4322@1,KOG4322@2759
COG Functional cat. P
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko03036,ko04121
Hectar predicted targeting category other localisation
Exons 5
Model size 1522
Cds size 1014
Stop 1
Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929013.0955734-UTR-H-fluviatilis_contig10048:2..5 1622929013.0955734-UTR-H-fluviatilis_contig10048:2..5 Heribaudiella fluviatilis SAG_13_90 UTR H-fluviatilis_contig10048 3..5 +
1691135149.1350696-UTR-H-fluviatilis_contig10048:2..5 1691135149.1350696-UTR-H-fluviatilis_contig10048:2..5 Heribaudiella fluviatilis SAG_13_90 UTR H-fluviatilis_contig10048 3..5 +
1622929013.2002044-UTR-H-fluviatilis_contig10048:4819..5324 1622929013.2002044-UTR-H-fluviatilis_contig10048:4819..5324 Heribaudiella fluviatilis SAG_13_90 UTR H-fluviatilis_contig10048 4820..5324 +
1691135149.2344782-UTR-H-fluviatilis_contig10048:4819..5324 1691135149.2344782-UTR-H-fluviatilis_contig10048:4819..5324 Heribaudiella fluviatilis SAG_13_90 UTR H-fluviatilis_contig10048 4820..5324 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929013.1098058-CDS-H-fluviatilis_contig10048:5..61 1622929013.1098058-CDS-H-fluviatilis_contig10048:5..61 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 6..61 +
1691135149.1529982-CDS-H-fluviatilis_contig10048:5..61 1691135149.1529982-CDS-H-fluviatilis_contig10048:5..61 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 6..61 +
1622929013.125052-CDS-H-fluviatilis_contig10048:913..1015 1622929013.125052-CDS-H-fluviatilis_contig10048:913..1015 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 914..1015 +
1691135149.174598-CDS-H-fluviatilis_contig10048:913..1015 1691135149.174598-CDS-H-fluviatilis_contig10048:913..1015 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 914..1015 +
1622929013.1369288-CDS-H-fluviatilis_contig10048:1920..2146 1622929013.1369288-CDS-H-fluviatilis_contig10048:1920..2146 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 1921..2146 +
1691135149.1898153-CDS-H-fluviatilis_contig10048:1920..2146 1691135149.1898153-CDS-H-fluviatilis_contig10048:1920..2146 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 1921..2146 +
1622929013.150827-CDS-H-fluviatilis_contig10048:3659..4079 1622929013.150827-CDS-H-fluviatilis_contig10048:3659..4079 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 3660..4079 +
1691135149.2070162-CDS-H-fluviatilis_contig10048:3659..4079 1691135149.2070162-CDS-H-fluviatilis_contig10048:3659..4079 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 3660..4079 +
1622929013.180265-CDS-H-fluviatilis_contig10048:4609..4819 1622929013.180265-CDS-H-fluviatilis_contig10048:4609..4819 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 4610..4819 +
1691135149.2245646-CDS-H-fluviatilis_contig10048:4609..4819 1691135149.2245646-CDS-H-fluviatilis_contig10048:4609..4819 Heribaudiella fluviatilis SAG_13_90 CDS H-fluviatilis_contig10048 4610..4819 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10048.157.1
>prot_H-fluviatilis_contig10048.157.1 ID=prot_H-fluviatilis_contig10048.157.1|Name=mRNA_H-fluviatilis_contig10048.157.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=338bp
MVLLHEWMVNRGELGAAEGLGMSLRACCPLSRGAEAFVEAHLQRVRLLRA QSRWNEAVKSASALAKLCDARGMAPQYARVLLELSRARLGAEPLSPVGAL PYALRCLAVCDSYSLDAIHATAMTHLAEVHLRLGSTRRARILLRACLGHL LSNASVQTQAEAWLAMAKCDITEFSLSAEKTRDADSTFRADNAGGAGESE GREGEEGEGKAGEGQRERQWGGDGDSVAVGQGGKAELLHRSAEYLDKAIV LFKRCHDFAGLRECWCLKARVCGELVEQGGPLENEARQARDESAEAFLAV LEAGARALASTPPGLKIGPEEIKRYVARATSDVPWQR* back to top mRNA from alignment at H-fluviatilis_contig10048:3..5324+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10048.157.1 ID=mRNA_H-fluviatilis_contig10048.157.1|Name=mRNA_H-fluviatilis_contig10048.157.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=5322bp|location=Sequence derived from alignment at H-fluviatilis_contig10048:3..5324+ (Heribaudiella fluviatilis SAG_13_90)GTA ATGGTCTTGCTCCATGAGTGGATGGTCAACCGCGGGGAACTCGGTGC
TGCGGAAGG GTGAGCGCTAGTAATATTTACAGAAGGAGTTTGCTTGATGG
CGTGTGCCCGTTTGGGCGGCGTTGTTGATGGAAACCGTTGCGGCCAAACT
GTTGCACCCTAGAACCAGGCATCTTGAGAGAGAGTGCAAGCAAGAACACT
ACAGTATGTACTCTGTGCGTTGGCCAGGATGTACACCGCCGTGACAGCGC
TTTGTAGAGAGCGAGGGAGAGAGAGAGAGGGAGGTGGTGATTGGCGAGCC
TTTTTTTTATTGATCCCTCAACGCGTGCTTGTACTCGCAAGGCATGTAGT
GCCATGGTAACGGACAACCACTCGTGCCTATTTCCACACTACCACCTACG
GTGCATGCATCGGATGAACGACTTTGTTCAGGAATGGATGATGACGGCGA
CGTAGTAGCCCTCCGGTCTGAAGGCAACAAGCTTCGCTCTCGACACACTT
GCAATCGTGTATCAGAGATATTACGTTGTATAGGGTGCCATTTGCAATAT
CCGACACGCTCGGGACTAGATGATGACACCCGGCACTAGAGGGGGGCTTC
CGCCTGTGATCGTGCTACTTGTTGGGGCCGCCGGTGCATTTGGTGCTTGT
CTTTGTGTGCCATAGCTGAGGGTGTTCTACCATTTCGGCGTACAAAGTAA
AATTGTGGTTGTTGATGTTGTTGTCGTGTGTACTGCGCCGTCGTGTTTAC
TTTGAAAGATGAAAACATGAACAGAAACCCAAATCCCTATGTTTTCTCAC
TGGGTCTTGAGAGCTGTGTGTGGGGTTGGCGGTTGTCGTGTTCGTGCTGG
CCAAGAAAAATGAACACGTTTTTTTCGGTTTTGTTGTCGCGTTCGATGCC
ACAATGGTCAGGCTCGGGATGAGCCTCCGAGCGTGCTGTCCGCTCAGTCG
AGGTGCCGAAGCCTTTGTCGAGGCGCATTTGCAGCGTGTGCGGCTTCTGC
GGGCCCAGAGCAG GTACGGTATGTGTTTTTCTGCAAACGTGTATTATGTC
TTCATCTGTGCATGTGTTTTTTTGGTGTTCATCTGTGTGTGTGTTTTTAC
GTGTTTACCTTTGTATGTATTTTCATTTGTTCATCTGGGTATGTGTTTTC
ACGTGTTTGTTTCTGTCTCGACTTTTGCAAAAGGTAACGCGTCAGGTTTG
TGAGTTACCGCAAGCCACGGTCACAAGTGGCCGAACACCGTGATATTCTA
CGGGACTTCGTCCCCCCGCAGGCTCCAAAGCCCAATGATCACCGTTTCCG
GGGGAGCTATGTGTCCTGTTTGTGCGTTTGTGTTACGGTGTGGCGGGACG
TACCGGAAGGAACTGAGACGTACTAGCATTGTCCCGAGTTATGAGCAGAT
ATGACAACGCAGCGGAGCAGTTGCAGCTGGGTTTCTTCTTCGAGAAGGTC
GTGTTCAAGGTTCGTGCGTGATCTCGCCACACAGGACGTAGGGCTCAAGG
GCCGTTCGTATATATGGTGGGGACGAGTCAAGACGCTTTGAAATGCTGAT
GCCGCATCCAAACGACTTTTGAAGCACTGCCAGGACTCAGCTGTTGCTTG
ACATCCTAACCCACCCGCTTTCCGGTCATCCTTAACGTGGCAATGACTCC
TAAGGGCTTCTCCTCTGGAGAATGCAGTCGCCCGTCCACCGACGCCGGCC
CCACCCTAGATCCTTGTTTGTGATTTCGTAATGTCCAGCTTGCTCCTTCC
TCATGTTCTCCTTCTGAATGTCCTGCGATCCCAAGGAGCCTATAGGCAAA
CACGGACAGGGTCGTTCTTTTTCCCCTTGTTTTCCTCCTTTGGTGAATAA
TATATATATATATGTATTTTTTTTGTCACTGCACCGATCGTGATTTTCTT
TCATTTTTTGTACGTCAGGTGGAACGAAGCGGTGAAGTCAGCATCAGCAC
TGGCAAAGCTCTGCGATGCGCGCGGCATGGCTCCCCAATACGCTCGCGTC
CTGCTGGAGCTATCCCGCGCGAGGCTAGGCGCTGAACCCCTCTCTCCTGT
TGGAGCGCTGCCGTACGCGCTGAGGTGCTTGGCGGTTTGCGACAGTTACT
CGCTGGATGCGATCCACGCGACTGCTATGACTCACCTGGCTGAG GTTAGT
TTTGCTTCTACTGTAGTAGTGGAGCTCACTTTTGCCCTTTTGACAGAGAT
CTGCAGTGGTCGGTTTGGTCAGCCGTGTTTTGATGTCCTGTAACACGTAC
ACTGTCGTTGATCGTCCGTTTATGGTCGGATATGTGATCGATGGACGCGA
GTCGAATGGGTTATCTGAAGGGAGGCATTTGCCCCCCCTTGAAACGCTTT
GAGCATGCTTTCACTTCCTTTGGGTCTCTCTCGGTTGCTTTTTACGTGTC
CTCCCCGCCCCCGCCCCTCTCTCATACACACCCTCAGATATGTACGATTT
GAGCCCGGCAGAAATATTGACGCGCTGTACATGCAAAAGCTCCCATATCG
ACAAACAGAACGCAGATCACGGCATTCGCTTGGTGATGCCTATGGGTGTC
AATTGTGAAACCCTTACCCACGTTTTTCAAATTGAGTGCGTGATTGAGAA
GCGAGTTCTGCACGTTGGACGCACGAAGTCCACCTCAAGAGTCAAGTTAT
GGCATCATGGGCCCGTCTCATTTGACTTTGGCATATGTTACGGTATCATG
GGTACATCTAGTATGACTTGAGCACATATTAGTCACACAAGTTTATGTTC
CAACTTCATCACGCATGCGTGTGTGCACTTGCACATACGGTACGCTAGTA
TGTTTTGACTGTGTGAGTTGCCTTTTTCCCGGCAAGTGTTGCAGCTTTTT
TTAACAAGTCTGACTATATATTCAATGACAAGCATGCACGTAGTGATATT
CCGAAGCCGCTTCCTGGTTGATGTCGTCCTTCATGGATACTCCAGCTCAT
CCCGTGATGATGTGAAATCGCATGTAGATAGGCAGAGGTCAGGAATATGT
AGGATCACAGGCAGAACAGTCTTCTACACTAATTTCTGCAATCAGAACGG
ACTCCAAACTGTAACTCGTTGTTCACTGAGAAGCCGGCGTAGCACCGCAG
GACGATCCACTTAAGTGTACAGAACATATCTGAGCAAACGTATTCCAATC
GCGCACAATAGTACTAGCTTGACACTAGCCACAGCTGTCTGTTATAACGG
TCTCATGATTTGAATGTCCTGTACACAAAAGTTTCAACTCGTTTCCTTCG
TTAAGTTTCACACGTCATTCGTCGATCTTTTTCATCTTGATCAATGCTGA
TGTTGATCCGGATGTTTCTTGCTTTCTGGTCGATATTCTGATCGGCGAGC
TGTTTAAAACACGGGGTGATACTCATTGGAATTCATTTTGTTGTGTGAGC
ACGATTGCATGATATATGTATATATATGTATATATTCATTGATCTTTTCT
GCCTTGATATATTCCATTTCATTCCTGTTACTATCATGATTTATTTGTTG
TTGAATATGATTATATTCAGTAATGTGTTTGTGTTCAGAGTCCCTTGCAG
CATTACACCTTGTTGGTAGCATTTATTAATTTTCATCTTAAGTACTGTAC
CCTCACCTTCCCCCGTCCGCGCGCGCGATCCCTTATCCGAACCCCTGGTG
GGCACAGGTCCATCTCCGGCTGGGATCAACTCGACGTGCACGCATCCTCT
TGCGGGCGTGCCTGGGTCACCTGCTGTCAAACGCCTCGGTCCAAACCCAG
GCGGAGGCTTGGTTAGCAATGGCCAAGTGTGACATCACCGAGTTTTCTCT
GTCTGCTGAAAAGACCCGTGATGCTGACTCCACGTTTCGAGCTGATAATG
CTGGCGGTGCCGGAGAGAGTGAGGGCCGAGAAGGAGAAGAGGGGGAGGGG
AAGGCAGGAGAAGGACAGCGTGAGAGGCAGTGGGGGGGGGACGGGGACAG
TGTGGCGGTAGGGCAAGGGGGAAAGGCTGAGCTGCTGCATCGTTCGGCGG
AGTACCTGGACAAGGCAATTGTACTGTTCAAGCGGTGTCACGACTTCGCG
GGCCTCCGGGAGTGTTGGTGCCTCAAG GTATGCGTTTCTGTCAAAAATTA
TGTGTAGGGTGCGAGTGGATCGCCTGTTATCTGTTTCTGTTCTGCTTCAT
GGTGTTTTTGCGTTTGTCGTGGCGTGGCATTTGTGTTCCCGCAAGGGACG
GGCACGTATGTAGAGACGCCTGCTTGTTTTGTTCGTTTTATGTGCTATGT
AATGTTCCTGCACTGTCGCCGAACCAATGGGTGTTGCTTTGTACTAATCG
ACCCGGCATACCAGAACGCATTATATGGTGAACTAGCACTAGTGATTGTG
CCCACGGCGACGCTGGTGGAGTCCCGGTGGGTCCGCTCGCTACGCTCGCC
AGTCGCCAGTGATGCTGTGCATTAGCTCATGTGGAAAAACAGGAAACAAA
ATGACTTCATCACCATCATCACCATCATCATCATGACAATTTCCGTACTA
CCACGTAGTTTTCGAGCGTACAAAGCACCGACTCGTCAGAGAGGCGCTAA
CGCCTAACCCCATCTCGCTATTGCCCTCACGCGTGTCCCCTACCATCCTC
CAAGCAGGCCCGCGTATGTGGCGAGTTGGTGGAACAAGGAGGGCCATTGG
AAAACGAAGCGCGTCAGGCTAGAGATGAATCGGCGGAGGCGTTCTTAGCG
GTGTTGGAAGCAGGGGCTAGAGCGCTAGCGTCTACGCCCCCCGGTCTGAA
AATCGGCCCGGAGGAAATCAAGAGATACGTTGCAAGGGCCACATCTGACG
TCCCATGGCAACGGTGA AAGTGTCGGTGTACCAGATACAGTAGTGTTGGA
TCCTGCAGGAGTGGGTGTAGTAGTCTGTGCTCTGAAAGTTTCGTCCGGGT
TGGTGCTTTCTGTTTAGTGCTGGTTTTTCTTTACATTTTGTGACGTTTCC
GTTGAGGTGGTGGATGGTTTGTACGTTAACAAAATTGAACAGTACGGTGG
TACGAGGACAAGGTTTTAGGTGTAAACAAGTTCTATTAACGCAGTGGTCC
CTATTCAAAAAGACTTTACCGTACTGCAAAAGACGAGCTCGGAAAGTCTC
TTGTTTGTGCTGTTCTGCGCGCACGCGGTTTTTTGTCCGTTTTCCACTGG
GCTATGACCCCTCTATTCCTCTCTTTCCGCTAACGCGACTGCCAGCACAG
CCCACAGTTACCTCAACATGAGCATATTTTGTCGGGCTACTCTCGATATA
TGAGGCCGTAACAGTCGTAGTGCCCCTACCCGCAGCCACCACATCAAAAG
GTAACTTGGGGCCAGTCCTAAC back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10048:3..5324+
>mRNA_H-fluviatilis_contig10048.157.1 ID=mRNA_H-fluviatilis_contig10048.157.1|Name=mRNA_H-fluviatilis_contig10048.157.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=2028bp|location=Sequence derived from alignment at H-fluviatilis_contig10048:3..5324+ (Heribaudiella fluviatilis SAG_13_90) ATGGTCTTGCTCCATGAGTGGATGGTCAACCGCGGGGAACTCGGTGCTGC GGAAGGATGGTCTTGCTCCATGAGTGGATGGTCAACCGCGGGGAACTCGG TGCTGCGGAAGGGCTCGGGATGAGCCTCCGAGCGTGCTGTCCGCTCAGTC GAGGTGCCGAAGCCTTTGTCGAGGCGCATTTGCAGCGTGTGCGGCTTCTG CGGGCCCAGAGCAGGCTCGGGATGAGCCTCCGAGCGTGCTGTCCGCTCAG TCGAGGTGCCGAAGCCTTTGTCGAGGCGCATTTGCAGCGTGTGCGGCTTC TGCGGGCCCAGAGCAGGTGGAACGAAGCGGTGAAGTCAGCATCAGCACTG GCAAAGCTCTGCGATGCGCGCGGCATGGCTCCCCAATACGCTCGCGTCCT GCTGGAGCTATCCCGCGCGAGGCTAGGCGCTGAACCCCTCTCTCCTGTTG GAGCGCTGCCGTACGCGCTGAGGTGCTTGGCGGTTTGCGACAGTTACTCG CTGGATGCGATCCACGCGACTGCTATGACTCACCTGGCTGAGGTGGAACG AAGCGGTGAAGTCAGCATCAGCACTGGCAAAGCTCTGCGATGCGCGCGGC ATGGCTCCCCAATACGCTCGCGTCCTGCTGGAGCTATCCCGCGCGAGGCT AGGCGCTGAACCCCTCTCTCCTGTTGGAGCGCTGCCGTACGCGCTGAGGT GCTTGGCGGTTTGCGACAGTTACTCGCTGGATGCGATCCACGCGACTGCT ATGACTCACCTGGCTGAGGTCCATCTCCGGCTGGGATCAACTCGACGTGC ACGCATCCTCTTGCGGGCGTGCCTGGGTCACCTGCTGTCAAACGCCTCGG TCCAAACCCAGGCGGAGGCTTGGTTAGCAATGGCCAAGTGTGACATCACC GAGTTTTCTCTGTCTGCTGAAAAGACCCGTGATGCTGACTCCACGTTTCG AGCTGATAATGCTGGCGGTGCCGGAGAGAGTGAGGGCCGAGAAGGAGAAG AGGGGGAGGGGAAGGCAGGAGAAGGACAGCGTGAGAGGCAGTGGGGGGGG GACGGGGACAGTGTGGCGGTAGGGCAAGGGGGAAAGGCTGAGCTGCTGCA TCGTTCGGCGGAGTACCTGGACAAGGCAATTGTACTGTTCAAGCGGTGTC ACGACTTCGCGGGCCTCCGGGAGTGTTGGTGCCTCAAGGTCCATCTCCGG CTGGGATCAACTCGACGTGCACGCATCCTCTTGCGGGCGTGCCTGGGTCA CCTGCTGTCAAACGCCTCGGTCCAAACCCAGGCGGAGGCTTGGTTAGCAA TGGCCAAGTGTGACATCACCGAGTTTTCTCTGTCTGCTGAAAAGACCCGT GATGCTGACTCCACGTTTCGAGCTGATAATGCTGGCGGTGCCGGAGAGAG TGAGGGCCGAGAAGGAGAAGAGGGGGAGGGGAAGGCAGGAGAAGGACAGC GTGAGAGGCAGTGGGGGGGGGACGGGGACAGTGTGGCGGTAGGGCAAGGG GGAAAGGCTGAGCTGCTGCATCGTTCGGCGGAGTACCTGGACAAGGCAAT TGTACTGTTCAAGCGGTGTCACGACTTCGCGGGCCTCCGGGAGTGTTGGT GCCTCAAGGCCCGCGTATGTGGCGAGTTGGTGGAACAAGGAGGGCCATTG GAAAACGAAGCGCGTCAGGCTAGAGATGAATCGGCGGAGGCGTTCTTAGC GGTGTTGGAAGCAGGGGCTAGAGCGCTAGCGTCTACGCCCCCCGGTCTGA AAATCGGCCCGGAGGAAATCAAGAGATACGTTGCAAGGGCCACATCTGAC GTCCCATGGCAACGGTGAGCCCGCGTATGTGGCGAGTTGGTGGAACAAGG AGGGCCATTGGAAAACGAAGCGCGTCAGGCTAGAGATGAATCGGCGGAGG CGTTCTTAGCGGTGTTGGAAGCAGGGGCTAGAGCGCTAGCGTCTACGCCC CCCGGTCTGAAAATCGGCCCGGAGGAAATCAAGAGATACGTTGCAAGGGC CACATCTGACGTCCCATGGCAACGGTGA back to top