mRNA_H-fluviatilis_contig10047.155.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig10047.155.1
Unique NamemRNA_H-fluviatilis_contig10047.155.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: D7FPP1_ECTSI (Enoyl-CoA hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPP1_ECTSI)

HSP 1 Score: 641 bits (1654), Expect = 3.960e-225
Identity = 325/372 (87.37%), Postives = 355/372 (95.43%), Query Frame = 1
Query:    1 RYFRPVEKLANGVAIIRIDGPEKMNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPARKVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYEV 1116
            R+F+PVEKL NGVAIIRIDGPEKMNTISG+FRQEIEDIWS  +A+D SVKAVVFISGKPDNYIAGADI+MISAT++KADLK ICMDGHATFD+LAKKGIPVIAAINGACLGGGLEWALHCDYRLATTS KTVLGLPEVKLGLLPGWGGTQLLHP+VGLQAALDMILTGKNIRP KALKMGLVDQLVD ASLEAVAVEAAA+LADG LK KR+ K+++NK+IEDTP+GRSI+WKKVGE+VAKSTGGNYPNA AIVDC+KFGL++ SK+AALE+EA+RFSEMAATPES  LIGLFEGSTALKKNRFGKPA+KVEK+AVLGAGLMGAGIA VSAEKGMTVLLKDRD+ SVGKGTSYIMDNAAAKLKK+RMTKYE+
Sbjct:   18 RFFQPVEKLDNGVAIIRIDGPEKMNTISGDFRQEIEDIWSGQIAEDPSVKAVVFISGKPDNYIAGADIRMISATEDKADLKQICMDGHATFDILAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSPKTVLGLPEVKLGLLPGWGGTQLLHPLVGLQAALDMILTGKNIRPHKALKMGLVDQLVDAASLEAVAVEAAASLADGSLKSKRKPKALMNKIIEDTPMGRSIMWKKVGEKVAKSTGGNYPNATAIVDCIKFGLSS-SKQAALEYEAQRFSEMAATPESESLIGLFEGSTALKKNRFGKPAKKVEKVAVLGAGLMGAGIAQVSAEKGMTVLLKDRDSASVGKGTSYIMDNAAAKLKKRRMTKYEM 388          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: A0A835Z334_9STRA (Enoyl-CoA hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z334_9STRA)

HSP 1 Score: 533 bits (1373), Expect = 1.100e-182
Identity = 263/370 (71.08%), Postives = 311/370 (84.05%), Query Frame = 1
Query:    4 YFRPVEKLANGVAIIRIDGPEKMNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPARKVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYE 1113
            YF PV+    GVA+IRI+ P KMNT+S   R E+E +W   V  + S+KAVVFIS KPDN+IAGADI MI +T NKADLK +CM+GH TFD++AK+GIP +AAINGACLGGGLEWALHCDYR+ATTS KTVLGLPEVKLGLLPGWGGTQLL P+VGLQAALDM+LTGKNIRPD+ALKMGLV++ VDPASLE VA++AAA LA G LKP RR+K +  ++IEDTP GR++VWKKV E VAK+TGG+YP+  AIVDCV+ G  AP+K+AALE+EA++FSEMAATP+SA LIGLF+G+TALKKN FG PAR+VE +AVLGAGLMGAGIA VS EKG+ VLLKDRD  SV KG  YI DN AAKLKK+R TK++
Sbjct:   19 YFEPVQVTEKGVAVIRINCPGKMNTVSDTMRAEVERLWKADVESNASIKAVVFISSKPDNFIAGADINMIKSTPNKADLKRVCMEGHDTFDVIAKRGIPTVAAINGACLGGGLEWALHCDYRIATTSKKTVLGLPEVKLGLLPGWGGTQLLRPLVGLQAALDMMLTGKNIRPDRALKMGLVNETVDPASLERVAIQAAAELAAGTLKPVRRAKPLAQRLIEDTPAGRAVVWKKVTETVAKNTGGHYPSPPAIVDCVRHGYGAPTKRAALEYEAQKFSEMAATPQSAALIGLFDGTTALKKNPFGAPARRVETVAVLGAGLMGAGIAQVSCEKGLRVLLKDRDAASVSKGIKYISDNQAAKLKKRRATKFD 388          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: W7TLR9_9STRA (Trifunctional enzyme subunit mitochondrial n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLR9_9STRA)

HSP 1 Score: 456 bits (1173), Expect = 1.370e-154
Identity = 237/370 (64.05%), Postives = 290/370 (78.38%), Query Frame = 1
Query:    1 RYFRPVEKLANGVAIIRIDGPEKMNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPARKVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKY 1110
            +YF PVE + +GVAIIRIDGP KMNTI   FRQEI+ +W+  VA+D SVKA V IS KPDN+IAGADIK I + ++ A LK++C+ GHATF  + K   P++AAI+G  LGGGLE AL+CDYR+ T+S KTVLGLPEVKLGLLPG+GGTQ LHPIVGLQAALDM LTGKNIRPDKA KMGL D +VDPA+LE VAVE A ALA+G LK KR+ K ++ KV+EDT +GRSIV+ +  + VAK+TGG+YP   AI+D +K+G T  SK  ALE+EA RF+E+AAT  SA L G+F G+TALK++++GKPA  VE +AV+GAGLMGAGIA V+AEKG  VLLKD+D   V +G  YI DN   K+KKKRMTKY
Sbjct:   39 QYFAPVE-VKDGVAIIRIDGPGKMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFT-HSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKY 406          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: A0A482S348_9ARCH (3HCDH_N domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S348_9ARCH)

HSP 1 Score: 394 bits (1013), Expect = 1.360e-131
Identity = 211/372 (56.72%), Postives = 276/372 (74.19%), Query Frame = 1
Query:    1 RYFRPVEKLANGVAIIRIDGPEKMNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPARKVEKIAVLGAGLMGAGIASVSAEKGM-TVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYE 1113
            +YF   E + +GVAI+R++GPEKMNTIS   + + E I+ + V  ++ +KAVVFIS KPDN+IAGADI MI A ++K+ LK + M GH  FD L K  IP++AAING  LGGGLEWA++CDYR+AT+S KT LGLPEVKLGLLPG  GT  L  +VG  AALDMILTGKNI+ DKA KMGLVD +VDPASLE+VA+  A  LA+G +K  +R K ++ +++EDTP+   I++KK  E V K+TGG+YP  +AI+D ++  +   +K+  LE EA +F+++AATPES  LIG+F G  A+KK+ FGKP++ V+KIAVLGAGLMGAGIA VS ++G  TVLLKDRD  SV +G   I+D    KLKKK+MT Y+
Sbjct:   29 QYFDNFE-VKDGVAIVRLNGPEKMNTISKGMQADAEKIFREKVLPNKDIKAVVFISSKPDNFIAGADINMIKAFEDKSKLKELTMKGHGFFDELKKTKIPMVAAINGVALGGGLEWAMYCDYRIATSSPKTSLGLPEVKLGLLPGMAGTYHLPKLVGYAAALDMILTGKNIKADKAKKMGLVDLVVDPASLESVAITQALGLANGTVKTTKRKKDLMARLMEDTPLSH-IMFKKAREMVDKNTGGHYPAPYAIIDVLQNNM-GKTKQQHLEDEADKFAKLAATPESEALIGIFHGMNAVKKHDFGKPSKPVKKIAVLGAGLMGAGIAQVSVDQGKYTVLLKDRDQASVSRGEKVIVDEMRGKLKKKKMTNYQ 397          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: A0A7S3UU67_HETAK (Enoyl-CoA hydratase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU67_HETAK)

HSP 1 Score: 399 bits (1025), Expect = 1.050e-130
Identity = 210/371 (56.60%), Postives = 270/371 (72.78%), Query Frame = 1
Query:    1 RYFRPVEKLANGVAIIRIDGPEKMNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPARKVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYE 1113
            +YF+ +E +  GVAI++IDGP KMNTI   F +E+E IW + +  +  +K+VV +S KPDN+IAGADIKMIS+ ++K+ +K +C+  H        +G PV+AAI+GAC+GGGLE ALHC  R+AT   KTVL LPEVKLG+LPG+GGTQ L  +VG+Q ALDM+LTGKN+RPDKA KMGLVDQ+VD  SLE VA++ A  L D K K KRR KS VN ++EDTP+  S+++KK GE V K+T G YP   AI+DCV+ G   P +  ALE+EA RF+E+AATPES  LIG+F G T LKKNRFGKPA  V  + VLGAGLMGAGIA VSAEKG  VLLKDRD  +VG+G   +      K++++RM  ++
Sbjct:   37 KYFKELEVVDGGVAILKIDGPGKMNTIDEGFVREMEAIWDQQIMANPDIKSVVLMSSKPDNFIAGADIKMISSIEDKSSIKELCLAAHRGLFRKMVEGKPVVAAIHGACMGGGLEVALHCSARVATGHQKTVLSLPEVKLGILPGFGGTQRLPRLVGIQGALDMMLTGKNVRPDKAKKMGLVDQVVDGPSLEPVAIQMARDLQDPKYKVKRRPKSRVNWLLEDTPLN-SVIFKKAGEMVQKNTAGKYPAPFAILDCVRNGYGKPLE-GALEYEAARFAELAATPESDALIGIFNGMTHLKKNRFGKPAVPVRTVGVLGAGLMGAGIAQVSAEKGFKVLLKDRDAAAVGRGQGLLDQAWRKKVQRRRMANHD 405          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: B7FXY5_PHATC (Enoyl-CoA hydratase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXY5_PHATC)

HSP 1 Score: 385 bits (989), Expect = 1.840e-125
Identity = 196/340 (57.65%), Postives = 259/340 (76.18%), Query Frame = 1
Query:   97 QEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPAR-KVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYE 1113
            +E + +W   +A +  VKAVVF S KPD +IAGADI  I A +NK DL     DG   F  +  KG+P++AAI+G  LGGGLEWAL CDYR+ T S+KT +GLPEVKLGLLPG+GGTQ LHP+VGLQ A+DM+LTGK+IRP +A KMGLVD +V  ASLE VA+++AAALA+G LK KR+SKS+ NK++ED  IGR+++W ++ + V K+T G YP  +AI+DCVKFGL  PS+K   +HE + F+++AATPES  LIG+F+G T +KK+ FG  A   V+ +AV+GAGLMGAGIA V+AEKG+ VLLKDR+  +VG+G SY+ +N + KLK+KRMT+Y+
Sbjct:    3 EEAKKLWKDEIASNSDVKAVVFSSAKPDMFIAGADIFDIKAVENKQDLIPFIADGVKFFQDMRGKGVPLVAAIDGPALGGGLEWALWCDYRICTDSSKTKMGLPEVKLGLLPGFGGTQNLHPVVGLQNAMDMMLTGKDIRPHQAKKMGLVDLVVAQASLERVAIDSAAALANGSLKAKRKSKSMFNKILEDNSIGRNVIWNQIDKMVQKNTNGKYPAPYAIIDCVKFGLDNPSQK--YQHEREEFAKLAATPESEALIGIFDGMTQMKKHSFGADAAIPVKTVAVMGAGLMGAGIAQVTAEKGIKVLLKDRNDEAVGRGQSYMTENWSKKLKRKRMTQYQ 340          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: A0A7S2XW23_9STRA (Enoyl-CoA hydratase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW23_9STRA)

HSP 1 Score: 383 bits (983), Expect = 7.580e-124
Identity = 205/372 (55.11%), Postives = 264/372 (70.97%), Query Frame = 1
Query:    7 FRPVEKLANGVAIIRIDGPEKMNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPARK--VEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYEV 1116
            F PVE +  GVAI+R+DGP K+NTI  +F +E E +    +A    VKAVVF S K  N+IAGADI +I+AT++K+  K+ CM+ H  F  L   G P++AAI+G C+GGGLEWALHCDYR+AT S KT+L LPEVKLGLLPG+ GTQ L   VG++AALDMILTGKN+R DKA K+GLV+Q+V P SLE VAV+ A  LA G+LK K + KS V+KV+ED   GRS+V+ +  + V K+T G+YP   AI+DC+K G      KA LE+EA RF+E+A T +S  LIG+F G TALKKN FG PA++  V+ + VLGAGLMGAGIA VS EKGM VLLKD+D     +G   I D    KL+++R T +++
Sbjct:   48 FAPVEVVDGGVAIVRLDGPGKVNTIDPDFMREAERLCEHELAVP-GVKAVVFTSAKKGNFIAGADINVIAATEDKSTFKDFCMEAHGIFAKLRGLGKPLVAAIDGTCMGGGLEWALHCDYRVATDSPKTILALPEVKLGLLPGFAGTQRLPKTVGVKAALDMILTGKNVRADKARKIGLVNQVVSPVSLETVAVDCARKLATGELKAKPKKKSAVDKVLEDFGPGRSVVFSQAEKMVQKNTDGHYPAPFAILDCIKEGFNVSPDKA-LEYEATRFAELAGTTQSEALIGIFNGMTALKKNPFGSPAKEDQVQTVGVLGAGLMGAGIAQVSLEKGMKVLLKDKDLAGASRGEKGIKDALKKKLQRRRKTNHQM 417          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: A0A7S3L3T2_9STRA (Enoyl-CoA hydratase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3T2_9STRA)

HSP 1 Score: 381 bits (978), Expect = 1.770e-122
Identity = 194/372 (52.15%), Postives = 272/372 (73.12%), Query Frame = 1
Query:    4 YFRPVEKLANGVAIIRIDGPEK-MNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPAR-KVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYE 1113
            +F+ V+    GVA++R D   K +NTIS +  +E E +W+  +  + +VK+VVF S KP  +IAGADI  I   ++K++L  I   G A F  + +KG+P++AAI+G  LGGGLEWAL CDYR+ T ++KT +GLPEVKLGLLPG+GGTQ LHP+VGLQ A+DM+LTGK IRPDKA KMGLVD +V PASLE VA+++AA LA+  LK  R+ KS +N+++ED   GRS++W +V + V K+T G YP    I+DCVK+GL  PS     ++E ++F+++AATPES  LIG+F+G T +KK+ +G  A   V+K+AV+GAGLMGAGIA V+AEKG   +LKDR+  ++G+GTSY+ +N   K+++KRMT+Y+
Sbjct:   87 FFQNVDISPQGVAVVRFDNLTKPVNTISFKLAEEAEKLWANEIESNDTVKSVVFSSAKPGMFIAGADIFDIQNIQDKSELVPIIAGGLAFFQKMREKGVPLVAAIDGPALGGGLEWALWCDYRICTDNSKTKMGLPEVKLGLLPGFGGTQNLHPLVGLQNAMDMMLTGKEIRPDKAKKMGLVDLVVAPASLEQVAIDSAAQLANKTLKSNRKPKSYMNQLLEDNKFGRSVIWNQVEKMVQKNTNGKYPAPLKIIDCVKYGLEHPSGNDKYKYEREQFAKLAATPESEALIGIFDGMTKMKKHSYGADAAIPVKKVAVMGAGLMGAGIAQVTAEKGFATILKDRNDEAIGRGTSYMNENWKKKVQRKRMTQYQ 458          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: A0A7S2MJA5_9STRA (Enoyl-CoA hydratase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MJA5_9STRA)

HSP 1 Score: 380 bits (975), Expect = 7.940e-122
Identity = 201/376 (53.46%), Postives = 270/376 (71.81%), Query Frame = 1
Query:    1 RYFRPVEKLANGVAIIRIDGPEK-MNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADG---KLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKPAR-KVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYE 1113
            ++F+ VE   +GVAI+R D  +K +NT+S     E + +W++ + ++  VKAVVF S KPD +IAGADI  I    +K+ LK I       F  +  KG+P+IAAI+G  LGGGLEWAL CDYR+ T + KT LGLPEVKLGLLPG+GGTQ L  +VG+Q A+DM+LTGK+IRPDKA KMGLVD +V P SLE VA++ A  L DG   K KPK+  KS++N+ IEDT  G+S++WKK+ E V K+T GNYP+  AI+DCVK+GL  PS      +E ++F+++A T ES  LIG+F+G TA+KK+++G+ A   V K+AV+GAGLMGAGIA V+AEKG  VLLKDRD  +VG+G SY+ DN   K+K++RM +Y+
Sbjct:  104 KFFQNVEVTQDGVAIVRFDNRDKKVNTLSFALSAEAKTLWNEEIHENNDVKAVVFTSAKPDTFIAGADIFDIQQLDDKSKLKTIIEGELEFFQKMKTKGVPLIAAIDGPALGGGLEWALWCDYRICTDNPKTKLGLPEVKLGLLPGFGGTQNLPALVGIQNAMDMMLTGKDIRPDKAKKMGLVDLVVAPQSLEKVAIDTAKGLVDGTAKKSKPKK--KSLLNRFIEDTSPGQSMMWKKINEMVQKNTNGNYPSPFAIIDCVKYGLAHPSGNEKFRNEREQFAKLAETTESEALIGIFDGMTAMKKHQYGEDAALPVNKVAVIGAGLMGAGIAQVTAEKGYDVLLKDRDDGAVGRGLSYMSDNWDKKVKRRRMKRYQ 477          
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Match: A0A7S3DSP1_9STRA (Enoyl-CoA hydratase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DSP1_9STRA)

HSP 1 Score: 379 bits (972), Expect = 1.530e-121
Identity = 196/373 (52.55%), Postives = 267/373 (71.58%), Query Frame = 1
Query:    1 RYFRPVEKLANGVAIIRIDGPEK-MNTISGEFRQEIEDIWSKHVADDRSVKAVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQLLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAAALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNAHAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALKKNRFGKP-ARKVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKGTSYIMDNAAAKLKKKRMTKYE 1113
            ++F+ VE   +GVA+IR D   K +N+IS     E +++W+  +  +  VKAVVF S KP  +I GADI  I  T+NK DL  +   G   F  +  KGIP++AAI+G  LGGGLEWAL CDYR+ T S+KT +GLPEVKLGLLPG+GGTQ LHP+VGLQ A+DM+LTGK+IRP KA KMGLVD +V PASLE+VA+++A  LAD  LKPKR+ KS  N+++ED   GR  +W ++ + + K+T G YP+   I+DCVK+GL  P+  A  ++E ++F+ +AAT ES  LIG+F+G T +KK+ +    A  V+ +AV+GAGLMGAGIA V+AEKG+ VLLKDR+  SVG+G SY+ DN   K+K+KRMT+++
Sbjct:   90 KFFQNVEFTDSGVAVIRFDCLGKSVNSISFALADESKELWANEIEKNDKVKAVVFSSAKPGTFIVGADIYDIKKTENKQDLIPVIEGGLKFFQHIRSKGIPLVAAIDGPALGGGLEWALWCDYRICTDSSKTKMGLPEVKLGLLPGFGGTQNLHPLVGLQNAMDMMLTGKDIRPSKAKKMGLVDLVVAPASLESVAIDSALGLADKTLKPKRKPKSFFNRLLEDNSFGRYAIWDQINKMIMKNTNGKYPSPFKIIDCVKYGLDNPTGDAKYKYEREQFASLAATSESEALIGIFDGMTQMKKHGYSADTALPVKSVAVMGAGLMGAGIAQVTAEKGIQVLLKDRNDESVGRGLSYMQDNWKKKVKRKRMTEHK 462          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10047.155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP1_ECTSI3.960e-22587.37Enoyl-CoA hydratase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z334_9STRA1.100e-18271.08Enoyl-CoA hydratase n=1 Tax=Tribonema minus TaxID=... [more]
W7TLR9_9STRA1.370e-15464.05Trifunctional enzyme subunit mitochondrial n=1 Tax... [more]
A0A482S348_9ARCH1.360e-13156.723HCDH_N domain-containing protein (Fragment) n=1 T... [more]
A0A7S3UU67_HETAK1.050e-13056.60Enoyl-CoA hydratase (Fragment) n=1 Tax=Heterosigma... [more]
B7FXY5_PHATC1.840e-12557.65Enoyl-CoA hydratase n=2 Tax=Phaeodactylum tricornu... [more]
A0A7S2XW23_9STRA7.580e-12455.11Enoyl-CoA hydratase (Fragment) n=1 Tax=Fibrocapsa ... [more]
A0A7S3L3T2_9STRA1.770e-12252.15Enoyl-CoA hydratase n=1 Tax=Amphora coffeiformis T... [more]
A0A7S2MJA5_9STRA7.940e-12253.46Enoyl-CoA hydratase n=1 Tax=Helicotheca tamesis Ta... [more]
A0A7S3DSP1_9STRA1.530e-12152.55Enoyl-CoA hydratase n=1 Tax=Amphiprora paludosa Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig10047contigH-fluviatilis_contig10047:1626..7970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score643.3
Seed ortholog evalue7.1e-182
Seed eggNOG ortholog2880.D7FPP1
Preferred nameHADHA
KEGG rclassRC00029,RC00103,RC00770,RC00831,RC00834,RC01086,RC01095,RC01098,RC01103
KEGG koko:K07515
KEGG ReactionR01778,R02685,R03026,R03045,R04137,R04170,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04743,R04744,R04745,R04746,R04748,R04749,R05595,R06942,R07935,R07936,R07951,R07952
KEGG Pathwayko00062,ko00071,ko00280,ko00310,ko00380,ko00410,ko00627,ko00640,ko00650,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00062,map00071,map00280,map00310,map00380,map00410,map00627,map00640,map00650,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212
KEGG ModuleM00013,M00032,M00085,M00087
GOsGO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0003857,GO:0003985,GO:0003988,GO:0004300,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005777,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006950,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009062,GO:0009295,GO:0009605,GO:0009611,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010259,GO:0016020,GO:0016042,GO:0016054,GO:0016407,GO:0016408,GO:0016453,GO:0016491,GO:0016507,GO:0016508,GO:0016509,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0016829,GO:0016835,GO:0016836,GO:0017076,GO:0019395,GO:0019752,GO:0019866,GO:0030258,GO:0030554,GO:0031090,GO:0031667,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032868,GO:0032991,GO:0033218,GO:0034440,GO:0036094,GO:0036125,GO:0042060,GO:0042221,GO:0042493,GO:0042579,GO:0042594,GO:0042645,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043434,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046395,GO:0048037,GO:0048856,GO:0050662,GO:0050896,GO:0051287,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0097159,GO:0097367,GO:0098798,GO:1901265,GO:1901363,GO:1901567,GO:1901575,GO:1901652,GO:1901681,GO:1901698,GO:1901700
EggNOG free text desc.enoyl-CoA hydratase activity
EggNOG OGsCOG1024@1,KOG1683@2759
EC1.1.1.211,4.2.1.17
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTrifunctional enzyme subunit alpha
Ec32 orthologEc-16_001250.1
Exons9
Model size1116
Cds size1116
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929012.8746126-CDS-H-fluviatilis_contig10047:1625..16751622929012.8746126-CDS-H-fluviatilis_contig10047:1625..1675Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 1626..1675 +
1691135148.9996696-CDS-H-fluviatilis_contig10047:1625..16751691135148.9996696-CDS-H-fluviatilis_contig10047:1625..1675Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 1626..1675 +
1622929012.892828-CDS-H-fluviatilis_contig10047:2983..31791622929012.892828-CDS-H-fluviatilis_contig10047:2983..3179Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 2984..3179 +
1691135149.0127966-CDS-H-fluviatilis_contig10047:2983..31791691135149.0127966-CDS-H-fluviatilis_contig10047:2983..3179Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 2984..3179 +
1622929012.9051797-CDS-H-fluviatilis_contig10047:3380..35451622929012.9051797-CDS-H-fluviatilis_contig10047:3380..3545Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 3381..3545 +
1691135149.0202763-CDS-H-fluviatilis_contig10047:3380..35451691135149.0202763-CDS-H-fluviatilis_contig10047:3380..3545Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 3381..3545 +
1622929012.9186285-CDS-H-fluviatilis_contig10047:4417..45081622929012.9186285-CDS-H-fluviatilis_contig10047:4417..4508Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 4418..4508 +
1691135149.0299969-CDS-H-fluviatilis_contig10047:4417..45081691135149.0299969-CDS-H-fluviatilis_contig10047:4417..4508Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 4418..4508 +
1622929012.943111-CDS-H-fluviatilis_contig10047:4995..51951622929012.943111-CDS-H-fluviatilis_contig10047:4995..5195Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 4996..5195 +
1691135149.0396857-CDS-H-fluviatilis_contig10047:4995..51951691135149.0396857-CDS-H-fluviatilis_contig10047:4995..5195Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 4996..5195 +
1622929012.9600701-CDS-H-fluviatilis_contig10047:5976..60751622929012.9600701-CDS-H-fluviatilis_contig10047:5976..6075Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 5977..6075 +
1691135149.0628967-CDS-H-fluviatilis_contig10047:5976..60751691135149.0628967-CDS-H-fluviatilis_contig10047:5976..6075Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 5977..6075 +
1622929012.9725778-CDS-H-fluviatilis_contig10047:6417..65461622929012.9725778-CDS-H-fluviatilis_contig10047:6417..6546Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 6418..6546 +
1691135149.0808158-CDS-H-fluviatilis_contig10047:6417..65461691135149.0808158-CDS-H-fluviatilis_contig10047:6417..6546Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 6418..6546 +
1622929012.9884667-CDS-H-fluviatilis_contig10047:7303..73981622929012.9884667-CDS-H-fluviatilis_contig10047:7303..7398Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 7304..7398 +
1691135149.0888412-CDS-H-fluviatilis_contig10047:7303..73981691135149.0888412-CDS-H-fluviatilis_contig10047:7303..7398Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 7304..7398 +
1622929013.0002332-CDS-H-fluviatilis_contig10047:7879..79701622929013.0002332-CDS-H-fluviatilis_contig10047:7879..7970Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 7880..7970 +
1691135149.0985384-CDS-H-fluviatilis_contig10047:7879..79701691135149.0985384-CDS-H-fluviatilis_contig10047:7879..7970Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10047 7880..7970 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig10047.155.1prot_H-fluviatilis_contig10047.155.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig10047 1626..7970 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig10047.155.1

>prot_H-fluviatilis_contig10047.155.1 ID=prot_H-fluviatilis_contig10047.155.1|Name=mRNA_H-fluviatilis_contig10047.155.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=372bp
RYFRPVEKLANGVAIIRIDGPEKMNTISGEFRQEIEDIWSKHVADDRSVK
AVVFISGKPDNYIAGADIKMISATKNKADLKNICMDGHATFDLLAKKGIP
VIAAINGACLGGGLEWALHCDYRLATTSAKTVLGLPEVKLGLLPGWGGTQ
LLHPIVGLQAALDMILTGKNIRPDKALKMGLVDQLVDPASLEAVAVEAAA
ALADGKLKPKRRSKSIVNKVIEDTPIGRSIVWKKVGEQVAKSTGGNYPNA
HAIVDCVKFGLTAPSKKAALEHEAKRFSEMAATPESACLIGLFEGSTALK
KNRFGKPARKVEKIAVLGAGLMGAGIASVSAEKGMTVLLKDRDTTSVGKG
TSYIMDNAAAKLKKKRMTKYEV
back to top

mRNA from alignment at H-fluviatilis_contig10047:1626..7970+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10047.155.1 ID=mRNA_H-fluviatilis_contig10047.155.1|Name=mRNA_H-fluviatilis_contig10047.155.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=6345bp|location=Sequence derived from alignment at H-fluviatilis_contig10047:1626..7970+ (Heribaudiella fluviatilis SAG_13_90)
AGGTATTTTCGGCCAGTGGAGAAGTTGGCAAACGGCGTGGCTATCATCCG GTGGGTGGCTTTCCGGTCGCGTTTGATGCACGGTGCTGTCTGTCAGTGAA TATGGTGCTGACTTTCGTCGTGCTGCTTAGATTGTCCTGTGTCTTACGGT ACACCCGATGTGATGTACGTTGCGCCATCTTCTGGAGTTGTGGAACATCA CTCCGCGTTTTACACCGACTGCGTACTCTGACTTTTTTGCGAATGGGTGA TGCATGCGTGTTGTCCGCACTGTTGTAGAGCATTTGCGTTACGGCGCAAT CATTGCTCATGAGTGAGAGGGGTGATGCTTGTTAAGTCACTGGCACTGTA GTTTCTATACGTGGTATACCAGTACAATATATCAAAGTTGTGCAAGGTTG CCTGACTGGTATTCATTGTATGATGCAACGAAGGTGTGCTCTCAAGAATA AGTTGAAAATAGAGAGCAAATTGAAGCTGCCCGATGTTTCGAGTTCGTGG ATGCGAATCGACGACATGTGGCAACAAGTTGCCCGCTTGTGGTTGCCCTG TTGGGTTCCACCTCGTCGCTAGCTTCGCATACAAAGGACCTTGCATGCTA TGGCTTGATGACGTCCCGGCGCGCCGTCAGTGGCGAAAATGTTGCTGCTG CTGGTTGTAAATTCTTGTCACACCGGGGAGCGTTTGCTGTAGGTAACATC GTAAATGGGTCGTAAACTAGGAGGTGGCCATCAATCTCTCCTCCCACCAA AGTTGGACGCGAAGTTGCGGTTGAACAATTTTTTAGCCCTCACATCAAAT CCAAAAGGCGTGCTGTGAGTTTGCTCGTTCCGAAGTCCGCGGCAGACCAA AGCAACGCATGCCGGATTCAAGGCGCCCTCTTTGATCTCTGTTGTGGTTA AATCGCCAGAGTTGCGTCCTGTCCATGTCCCTTCCGCCTGTAATAGATCC TCCTTGACGCCAGCAACGTGCCCTGGCTTGAAATATATGTTTCCGTCGCA TGCTGTGTTAGCACTTGTTGTTTCGCCTTGATCGTAGGCTAAACACGTCG ATTCTGGGATACTGCCCTAGTCATCAGCCGTCAAAGTGCAATCTGCAGGA GTGCGGTTCGAAAAGAAGGTCCTGCCCCGGGGCAAAATGTGTTTTTGTAA ATACCTTCTGAAACGTTAACGTGAGGCAAGATATGGTTGGAAAAAACACG GTAGCACGCTCTTCACATCACGGCCTGCACACCATGCAGAAATTTCAGCA GTGCACATTGCAGAGCAGTACACCTCATCGAGATCATCGGCCATACGCTC AAACAGTGCACCCTTCCCATACCCTTCCCATTTCCCGCGGTCTCGTGGAT ATCCTTAGGATTGATGGCCCAGAGAAAATGAACACGATATCGGGCGAGTT TCGGCAGGAAATCGAGGACATTTGGTCGAAACACGTCGCGGACGACCGGA GCGTGAAGGCCGTAGTCTTCATCTCGGGCAAGCCCGACAACTACATCGCC GGCGCGGACATCAAGATGATCAGTGCCACGAAGAACAAGGCAGACCTCAA GAACGTGCGTTGTTCGCCAGGGAAAAAATGGAAGTCGACTTAACGTCAGC AGCACTGCGTTGCTTCGCTGGAGGAGTCATGCTCGAATTGCCGCTCTCGA GTACGCTGAGTGTTTAGTCCTGACGCGTGCCGTTTCCTGACCATAAACCC GCACAAATCTGGCTGTGTGCGGCGTTGTTTGTGTCTTCTGCTCGCTTACC GTCAGATCTGCATGGACGGACACGCAACGTTCGACCTACTCGCGAAGAAG GGCATCCCCGTGATCGCAGCTATCAACGGTGCATGTCTCGGCGGGGGGTT GGAATGGGCCCTGCACTGCGACTATCGGCTCGCAACGACAAGCGCCAAAA CCGTCTTGGGGCTGCCGGAGGTACGGTCCGCATGATAGTGTCACACCAAG TTCTACTGTAGAAACACCTTCAGCCCGATGAAGATTATGATCGTTTGTTT CACACGTGACATGATAGCAACAACCTAAACCTTAAACCTTGGAGTGTGGC GTAACTCGGCAGTTTCTGTCAGATGTTGCGCTGAATTCTAGTACATTCTC CGTCCAGAAGAATTCTACTGCTGGTATGTCCGTTAGTTTCAACGTTTGAC GGGACAGGAGGCTGCAACTCGACTCAACAAGCTTGTCGTCATTCGGGCCT GTCAGTCCTACCCTGTACCGATTTTCGCAAGCGTCCACATCACGCTGGAA CAAATGCGGTTCATTTTTTATCGTCGCAGAATTCTCGACGTTTCACTTTT TTTTGCATGCTGACACAAGCGGAGCTTGAACGAAGCCAGTTTTTGCGCGC AAAGTCTCGGCAATTAGCGTATGACAAACTGTCGCCGCTGTTCCGAACCT TGGGCATCAGGTACAGTGGCGCTTGTTTCAGTGGCTGTTTCGCTGTTTCG TTGCTTCGGTCAGATTCTTCATGTTTGCGGCCGATTTGTGTTGCATGCAG TCGATTGTGTTTGGATGGCCGTCGTCAAGAGATTCACCAACTCACACGAT ACGTCACACCTTACGAGCCAATGTCAACATCGCAAGTACAACATTCAGTC GACGTCTGTCCGAAGCCTGGACCGCAATCCATCCAGACTGTAGTTTTATC TATTGCGGGCTTCATGAGGCCAATCGCTTATTCCGATGGTGATCCATTTA TTCTTTGGTGAGGCCAAAATCACTTGTTGCAATTCCACTTTTTTTTGTGT TATACACACGTCGCAAAACTATGCGCTTTGGTCGGGCTGCAGGTCAAGCT TGGTCTGCTTCCCGGGTGGGGAGGCACTCAGCTGCTTCACCCCATCGTGG GACTGCAGGCTGCCCTTGACATGATTCTCACTGGTGGGTGGCACGAGCGC AATGGTGGTGGTATAGCGTGGACTTCGAGCGCGACGCAGTGCTTCGTGAA GGCTCTAGACTGGAAAATTGTCGTCGCCTGTGTTTTCTTGGCGTGGAAAG GCAGAGGGAGAAAGACAGAGTACAAAATATTGTGCTCCCTCTATGTATCA TTTTTCAATTTTCTTGTCGCATCGACTGTGGTGTTAAACCTTTAATTATG TATTAAGGCGCGAAAGTTTTCAGACCACGACTTACTGTGTTTCCTCCGTC ATGCTCACTTTCCTGATAGTCCTACCCCGTTGCTACCCTTTAGACCTTGA GATTGCACAAGGTAATCGAGCAACAAGTTGACGCTCCTGTTCCAACCCCC CCCCCAAAAAAGAAATAATACGCAATAAGTAACAGGTTAAGCTCGTGGAG CACCCCCGGCCCACGTTACCACCCCGCCCCCCTCTGTTTTGCCACCTCTC CCCTTACCTTCACCGCCAAGGCAAGAACATTCGACCGGACAAGGCGTTGA AGATGGGACTCGTGGATCAGCTCGTGGATCCTGCGTCATTGGAAGCCGTA GCAGTCGAAGCGGCGGCTGCTCTCGCGGACGGTAAATTAAAACCCAAGCG GCGTTCGAAGAGCATCGTAAACAAGGTCATAGAGGACACCCCCATCGGAA GGTCCATTGTGTGGAAGAAGGTGGGCGCGGCGCCTTATGAGTGCATGGTG GGAGACTGGCAGAGAGGTATGGATAGATGGATAATTTGATGTTGAGGATG CACTGTGTTGGTGTCGTTCCAAAATTGGACGCCATGCCTGTGGCAGCGCA AGTGCATCCGTGGTGGGAATGCGACACCAGACTTGCCTGGGCGCGGGAAC ACGCTGCTCACACCTCGTCTTGGGCCTGTTCAATCTACTCTACGAAATCA CAGCGTTGAAGAATACGGGGTGAGATTATGCATCGTTCAATCTTCACGCG TGGTTGAGAGACGTGATGTACCGCCCAGATCAGGGCAGTGTGTCACCGTA TTCGTGGCATGGAGGCGGATACACGGCGCATCCGTCCTCACATCACGAAT ACGATGCGAAACAGTCAAGCACACATGGATTTTTTCGCTATCCCGTGTCT TTGCGCCCGCGAGAGCTGTTTGACACTATATGTCTAAACTGTGACCACGG ATTTGAGGGACTGTGTTAATGCGAAGATGAAATGAATAAAAACACCCACG GAGGCTTCTGTCTTCCAATAACATGATAGTCTGGACACCCAGCAAAGTCA TTCATTGAGCAAAAGCTCCTTATGAAACGGTAAATCGTCGGGGATCTTTC GCGTCACTCGCTTGGGATACCCGCACACCGATACGAACGGCCGTGTAATT CAGACCTAACCGCCCCCCCCCGTCTTCCTACCTATATTTCTACTGCCATT ACTACCACCACTACGTCTACTACTACGAACTGCGAACCTGCGGTTTTGCA GGTGGGCGAACAAGTGGCCAAGAGCACAGGTGGCAACTACCCAAACGCTC ACGCGATCGTTGACTGCGTCAAGTTCGGCCTCACCGCGCCTTCAAAGAAG GTGAAGGCCCACACATAAGCGTGGTCAGCAAAAGTCAGCGTATACAATAA GCAAGTAAAAGCACGAATCATACCCACATGTGGGGAAGCACGGGAGGGAG ATCACGTAGGCCGCTCAGAGGCGCCACAGTATTCTGAAACGGGAGGTCCA ACAAAACATCGCCTTTCCCTAATGATTTGCTCGTTCCTTGTTTTGTTCTT GTGAACGCCGGTCGGGCACGTGGGCGTTTGAACGACACGCGCGAGCACAC ACACACGTACATCGTCCCACTTTTTCTTGCCTTTGATTTCGTTTGTGATT TTTCCCTTGCTATCGGACGGACGGACGCACGCACACACGCAGGCGGCCCT GGAGCACGAGGCGAAACGTTTCTCGGAGATGGCGGCGACACCGGAGTCTG CGTGCTTGATCGGACTGTTCGAGGGTTCCACCGCGCTCAAGAAGAACCGT TTCGGCAAGCCCGCTCGCAAGGTATCATATTTTCGTACGCGCTTACGTTG CTTGGTTTCGACCACGAAGTCACACGAGTGGGTTCCCCGCGCCCTCGCCG ACAAACAACAGACTATCGTCGACAAAGATAAAGATACAGGAGAGAAAAGA AAAAAAGGGATGCACCTTTATTTTATGTGCATCCAGAGGTAGCCGTGCGC GATAATGTGGGTTCGTTGCTCAGGAGGAAGGAAAACCAAAACGCGTTGTT TGCACCGGTTTCGTCACGCTCTCTCGCGGGTATCGGTTCGGATGTTTTTT TACCGCTGAGTTTGTCGAGTTCTTTGAGAAGAACCAGTCCGGTAAGCCCG CTCGCACGGTCTGTGAATGCTGTCGATTGGTGGCGTTAAGAAGATGAAAA CACACGGATGTCGAATGCGTAGAACGTGCGAGAGTGCACGTGGAAGCTGG CAGACTGTTGTTAGATGCCGTCACTCTTCCAACTTCCAGTTACGGTTGCT TGTTATATACATATATATATATATATATATATTACAGCAAAATGTGTTCA ATTTGTTCTCGCCCTTTTTTCTCTCCTGCCAGTTTCCAAAAGTCATATGA ACGTGTACATAAGCAGACCAATGTGGGGCTTTTGACGCGAAGACCGGGTG GCTGCCGAGCGCAAACACGCTTGCACTTCCCGCGGTCAACGGTCCGTTGA GAGCGTCAACGAGATAAGTTCACTGTTGTTTGTGCCGTATTTTCGTAAAA CTCAACCTTGACCTGTTCAACAAAAAAGGTGGAAAAGATAGCTGTGCTCG GCGCGGGGCTAATGGGAGCCGGTATCGCGTCGGTGTCGGCTGAAAAGGGC ATGACGGTTCTTCTCAAAGACAGGTGAGACAGGCGGAAAGGGCAGTATGC TTACCCCCTAGCTCTAATGGCAGCAAATCACACAAAATTGATTTGCACAA AACAACGGATTGTGTGGTCGCATCATGAGGCTGCATACAACCCGACGGAG ATGACCTGACCTGTATGGGAACAAGGAAAACGATCGATGCCCGCGGGTGA GCGGGGTTCAGCGGGACATGGTAAGAGGTGCGGAAAAGGCAAGATACAAA GTGCTTAGTTGTGTTGATCGGTCGACCGTCGATTAGCACACCTCTTCAGG TATATCGGACGGAGAGGGCGGAGCGGGGAGAGCTGATCACATCAGGCTCA TCGTAGCGAGCACATTGATAATGCCATTGTTTCACTTTTGTTGGCACAAA AGAAGTTGTTCATGACGGGTGGTTGCGGTTGCCGTCCGTCCACGTGAAAA GGCGTTCTTGCCAATCCCACACCATATATGATGTCTCCGTCGTTTTGTTC GCAGGGATACCACGTCGGTAGGCAAGGGTACTTCGTACATTATGGATAAC GCTGCAGCCAAGCTCAAGAAGAAGAGGATGACTAAGTACGAGGTC
back to top

Coding sequence (CDS) from alignment at H-fluviatilis_contig10047:1626..7970+

>mRNA_H-fluviatilis_contig10047.155.1 ID=mRNA_H-fluviatilis_contig10047.155.1|Name=mRNA_H-fluviatilis_contig10047.155.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=2232bp|location=Sequence derived from alignment at H-fluviatilis_contig10047:1626..7970+ (Heribaudiella fluviatilis SAG_13_90)
AGGTATTTTCGGCCAGTGGAGAAGTTGGCAAACGGCGTGGCTATCATCCG
AGGTATTTTCGGCCAGTGGAGAAGTTGGCAAACGGCGTGGCTATCATCCG
GATTGATGGCCCAGAGAAAATGAACACGATATCGGGCGAGTTTCGGCAGG
AAATCGAGGACATTTGGTCGAAACACGTCGCGGACGACCGGAGCGTGAAG
GCCGTAGTCTTCATCTCGGGCAAGCCCGACAACTACATCGCCGGCGCGGA
CATCAAGATGATCAGTGCCACGAAGAACAAGGCAGACCTCAAGAACGATT
GATGGCCCAGAGAAAATGAACACGATATCGGGCGAGTTTCGGCAGGAAAT
CGAGGACATTTGGTCGAAACACGTCGCGGACGACCGGAGCGTGAAGGCCG
TAGTCTTCATCTCGGGCAAGCCCGACAACTACATCGCCGGCGCGGACATC
AAGATGATCAGTGCCACGAAGAACAAGGCAGACCTCAAGAACATCTGCAT
GGACGGACACGCAACGTTCGACCTACTCGCGAAGAAGGGCATCCCCGTGA
TCGCAGCTATCAACGGTGCATGTCTCGGCGGGGGGTTGGAATGGGCCCTG
CACTGCGACTATCGGCTCGCAACGACAAGCGCCAAAACCGTCTTGGGGCT
GCCGGAGATCTGCATGGACGGACACGCAACGTTCGACCTACTCGCGAAGA
AGGGCATCCCCGTGATCGCAGCTATCAACGGTGCATGTCTCGGCGGGGGG
TTGGAATGGGCCCTGCACTGCGACTATCGGCTCGCAACGACAAGCGCCAA
AACCGTCTTGGGGCTGCCGGAGGTCAAGCTTGGTCTGCTTCCCGGGTGGG
GAGGCACTCAGCTGCTTCACCCCATCGTGGGACTGCAGGCTGCCCTTGAC
ATGATTCTCACTGGTCAAGCTTGGTCTGCTTCCCGGGTGGGGAGGCACTC
AGCTGCTTCACCCCATCGTGGGACTGCAGGCTGCCCTTGACATGATTCTC
ACTGGCAAGAACATTCGACCGGACAAGGCGTTGAAGATGGGACTCGTGGA
TCAGCTCGTGGATCCTGCGTCATTGGAAGCCGTAGCAGTCGAAGCGGCGG
CTGCTCTCGCGGACGGTAAATTAAAACCCAAGCGGCGTTCGAAGAGCATC
GTAAACAAGGTCATAGAGGACACCCCCATCGGAAGGTCCATTGTGTGGAA
GAAGGCAAGAACATTCGACCGGACAAGGCGTTGAAGATGGGACTCGTGGA
TCAGCTCGTGGATCCTGCGTCATTGGAAGCCGTAGCAGTCGAAGCGGCGG
CTGCTCTCGCGGACGGTAAATTAAAACCCAAGCGGCGTTCGAAGAGCATC
GTAAACAAGGTCATAGAGGACACCCCCATCGGAAGGTCCATTGTGTGGAA
GAAGGTGGGCGAACAAGTGGCCAAGAGCACAGGTGGCAACTACCCAAACG
CTCACGCGATCGTTGACTGCGTCAAGTTCGGCCTCACCGCGCCTTCAAAG
AAGGTGGGCGAACAAGTGGCCAAGAGCACAGGTGGCAACTACCCAAACGC
TCACGCGATCGTTGACTGCGTCAAGTTCGGCCTCACCGCGCCTTCAAAGA
AGGCGGCCCTGGAGCACGAGGCGAAACGTTTCTCGGAGATGGCGGCGACA
CCGGAGTCTGCGTGCTTGATCGGACTGTTCGAGGGTTCCACCGCGCTCAA
GAAGAACCGTTTCGGCAAGCCCGCTCGCAAGGCGGCCCTGGAGCACGAGG
CGAAACGTTTCTCGGAGATGGCGGCGACACCGGAGTCTGCGTGCTTGATC
GGACTGTTCGAGGGTTCCACCGCGCTCAAGAAGAACCGTTTCGGCAAGCC
CGCTCGCAAGGTGGAAAAGATAGCTGTGCTCGGCGCGGGGCTAATGGGAG
CCGGTATCGCGTCGGTGTCGGCTGAAAAGGGCATGACGGTTCTTCTCAAA
GACAGGTGGAAAAGATAGCTGTGCTCGGCGCGGGGCTAATGGGAGCCGGT
ATCGCGTCGGTGTCGGCTGAAAAGGGCATGACGGTTCTTCTCAAAGACAG
GGATACCACGTCGGTAGGCAAGGGTACTTCGTACATTATGGATAACGCTG
CAGCCAAGCTCAAGAAGAAGAGGATGACTAAGTACGAGGTCGGATACCAC
GTCGGTAGGCAAGGGTACTTCGTACATTATGGATAACGCTGCAGCCAAGC
TCAAGAAGAAGAGGATGACTAAGTACGAGGTC
back to top