mRNA_H-fluviatilis_contig10036.132.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A061QQV3_9CHLO (Cell division n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QQV3_9CHLO) HSP 1 Score: 103 bits (258), Expect = 1.030e-23 Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMDTEMRSFPQSE 321 LR L+QDCI K +Y+SAAFFADKLVTLS + DVYLLA+T +L + +RRA++ ++ D +F+YLAA CL EC EWEECL++LGD + E+ + Q + Sbjct: 10 LRSLIQDCIEKHLYTSAAFFADKLVTLSNYEPGDVYLLAQTFFLGRNFRRALKLLNQSKTVERD---ARFRYLAARCLFECSEWEECLSMLGDSQVPEEIGAGQQEQ 113
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A388M6H8_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M6H8_CHABU) HSP 1 Score: 98.6 bits (244), Expect = 2.220e-23 Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMD 291 LR +V+DC+ K +YSS FFADKLVT+S + DV+LL++ +YL K YRRA+ R AD +F+YLAA CL E +EW+ECL +LGDG D Sbjct: 6 LRSVVRDCLGKHLYSSGIFFADKLVTMSDSAPADVFLLSQAYYLGKHYRRALHLLRQEHLLAAD---ARFRYLAAKCLEEVKEWDECLALLGDGEFD 99
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A7J7PWQ9_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PWQ9_9CHLO) HSP 1 Score: 104 bits (259), Expect = 2.410e-23 Identity = 52/101 (51.49%), Postives = 75/101 (74.26%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMDTEMR 303 LR LVQDCI+K +YS+A F+ADKLVTL+Q DVYL+A+T+++S+Q+RRAV + + ++F+YLAA CL E EW+ECLT+LGDG +D +++ Sbjct: 6 LRSLVQDCIAKHLYSTAVFYADKLVTLTQYAPGDVYLVAQTYFVSRQHRRAVMLLK----HHGLMEDVRFRYLAAKCLAEVEEWDECLTLLGDGELDDDLQ 102
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A061RDF5_9CHLO (Anaphase-promoting complex subunit 6 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RDF5_9CHLO) HSP 1 Score: 103 bits (258), Expect = 3.410e-23 Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMDTEMRSFPQSE 321 LR L+QDCI K +Y+SAAFFADKLVTLS + DVYLLA+T +L + +RRA++ ++ D +F+YLAA CL EC EWEECL++LGD + E+ + Q + Sbjct: 10 LRSLIQDCIEKHLYTSAAFFADKLVTLSNYEPGDVYLLAQTFFLGRNFRRALKLLNQSKTVERD---ARFRYLAARCLFECSEWEECLSMLGDSQVPEEIGAGQQEQ 113
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: E1ZN36_CHLVA (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZN36_CHLVA) HSP 1 Score: 99.8 bits (247), Expect = 9.570e-22 Identity = 60/120 (50.00%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMDTEMRSFPQSEQKPPFSHSHIPEG 360 LR +V DC++K MY +AAFFADKLVTLS +VY LA+ + S+Q+RR ++ R T +L + D L+F+YLAA CL EC+EWEECL+VLG G+D E P+ Q P S +P G Sbjct: 2 LRSVVHDCLAKHMYEAAAFFADKLVTLSGYSPAEVYTLAQAFFCSRQFRRCLQLLRST--ELIEKD-LRFRYLAARCLAECKEWEECLSVLG--GLDAEE---PEQLQLP-MPRSTVPLG 112
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A2P6TJ51_CHLSO (Cell division cycle 16-like protein isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJ51_CHLSO) HSP 1 Score: 99.8 bits (247), Expect = 1.120e-21 Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMDTE 297 LR +V DC++K MY +AAFFADKLVTLS +VY LA+ + S+Q+RR ++ R T +L + D L+F+YLAA CL ECREWE+CLTVLG G+D E Sbjct: 9 LRAVVHDCLAKHMYEAAAFFADKLVTLSGYAPAEVYTLAQAFFCSRQFRRCLQLLRGT--ELIEKD-LRFRYLAARCLAECREWEDCLTVLG--GLDVE 102
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A1Y1HXB8_KLENI (Anaphase-promoting complex n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXB8_KLENI) HSP 1 Score: 98.2 bits (243), Expect = 3.530e-21 Identity = 52/93 (55.91%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGD 279 LR +V+D + K +YSSA FFADKLVT+S A DVYLLA+ +YLSKQY+RA+ R AD +F+YLAA CL E +EW+ECL +LGD Sbjct: 6 LRSVVRDALGKHLYSSAIFFADKLVTVSGAAASDVYLLAQAYYLSKQYQRALHLLRQEHLLTADD---RFKYLAARCLAELKEWDECLVMLGD 95
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A835VNL7_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835VNL7_VANPL) HSP 1 Score: 90.9 bits (224), Expect = 1.380e-20 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMD 291 LR LV+DC+SK +YSSA FFADK V ++ +D D+Y+ A+ +L +QYRRA+ + L D L+F+YLAA CL E +EW +CLT+LGD +D Sbjct: 9 LRGLVRDCVSKHLYSSAIFFADK-VAVATSDPADIYMQAQALFLGRQYRRALHLLNSSSIVLRD---LRFRYLAAKCLEELKEWHQCLTMLGDAKVD 101
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A835S384_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835S384_VANPL) HSP 1 Score: 90.9 bits (224), Expect = 1.490e-20 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMD 291 LR LV+DC+SK +YSSA FFADK V ++ +D D+Y+ A+ +L +QYRRA+ + L D L+F+YLAA CL E +EW +CLT+LGD +D Sbjct: 9 LRGLVRDCVSKHLYSSAIFFADK-VAVATSDPADIYMQAQALFLGRQYRRALHLLNSSSIVLRD---LRFRYLAAKCLEELKEWHQCLTMLGDAKVD 101
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Match: A0A2K1J7S7_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J7S7_PHYPA) HSP 1 Score: 96.3 bits (238), Expect = 1.740e-20 Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 1 LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRAVRQPRVTRCQLADFDKLQFQYLAALCLVECREWEECLTVLGDGGMDTEMRSFPQSEQKPPFSHSHIPE 357 LR +V+DC+ K +YSSA FFADKL TL+ +D+Y+ A+ YL KQYRRA+ R AD L+F+YLAA CL E +EW+ECL +LGD +D E +Q +I E Sbjct: 9 LRAVVRDCLGKHLYSSAIFFADKLATLAGNATQDLYMQAQALYLGKQYRRALHLLRRHHLITAD---LRFRYLAAKCLEEIKEWDECLLMLGDSEVDEEGNLLVMDDQDTELLDKNIEE 124 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10036.132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10036.132.1 >prot_H-fluviatilis_contig10036.132.1 ID=prot_H-fluviatilis_contig10036.132.1|Name=mRNA_H-fluviatilis_contig10036.132.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=140bp LRRLVQDCISKSMYSSAAFFADKLVTLSQADIRDVYLLARTHYLSKQYRRback to top mRNA from alignment at H-fluviatilis_contig10036:7652..8178+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10036.132.1 ID=mRNA_H-fluviatilis_contig10036.132.1|Name=mRNA_H-fluviatilis_contig10036.132.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=527bp|location=Sequence derived from alignment at H-fluviatilis_contig10036:7652..8178+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10036:7652..8178+ >mRNA_H-fluviatilis_contig10036.132.1 ID=mRNA_H-fluviatilis_contig10036.132.1|Name=mRNA_H-fluviatilis_contig10036.132.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=840bp|location=Sequence derived from alignment at H-fluviatilis_contig10036:7652..8178+ (Heribaudiella fluviatilis SAG_13_90)back to top |