mRNA_H-fluviatilis_contig100352.128.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: D2VJL6_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VJL6_NAEGR) HSP 1 Score: 140 bits (353), Expect = 1.150e-35 Identity = 70/166 (42.17%), Postives = 96/166 (57.83%), Query Frame = 1 Query: 1 RSDNRGVAVFQLLPNAVLQRETSTFKLLDVGCSEGSITALLGEAFSIKPENTHGCDVRDVPTS-----------KDPAKLPYDDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDCNRDGFSVLLDVQHGFYARVWSDPVEMPTFC 465 R++NR + ++LP+ R +LD+GCSEGSITA++G + EN HGCDVRD+ S +D KLPY+ F +V LM+LHH++++ + EIHRVL PGGV + REHDC S++LD+ HG Y+ VWS P EMP FC Sbjct: 939 RANNRSSKIKEILPSNAKIRN-----MLDIGCSEGSITAVVGTELGLSKENIHGCDVRDIGKSYTTGFTFTLISEDNNKLPYESNS----------FSLVVALMSLHHIKNVEETIKEIHRVLEPGGVFIIREHDCTPTEISLVLDIMHGLYSMVWSSPREMPNFC 1089
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: UPI001CFD126C (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD126C) HSP 1 Score: 134 bits (337), Expect = 1.450e-35 Identity = 65/157 (41.40%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 1 RSDNRGVAVFQLLPNAVLQRETSTFKLLDVGCSEGSITALLGEAFSIKPENTHGCDVRDVPTS--KDPAKLPYDDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDCNRDGFSVLLDVQHGFYARVWSDPVEMPTFC 465 RS NR + +L+P ++ R +LD+GCSEGSIT +G + EN HGCDVRD+ + D ++ +H N F +VT LM+ HH++++ + E++R+L PGGVL+ REHDC+ S+ LD+ HG Y+ VWS P EMP FC Sbjct: 69 RSSNRSSKIKELIPKSLKVRN-----MLDIGCSEGSITQAIGHELGLTKENIHGCDVRDIGKTYTNDFTFHLISEQSNHLPFENN-SFSLVTALMSFHHIKNVQETIKEVYRILEPGGVLIIREHDCSPPEVSLTLDIMHGLYSLVWSSPREMPNFC 219
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: A0A6A5BAK3_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BAK3_NAEFO) HSP 1 Score: 131 bits (330), Expect = 1.070e-32 Identity = 63/156 (40.38%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 1 RSDNRGVAVFQLLPNAVLQRETSTFKLLDVGCSEGSITALLGEAFSIKPENTHGCDVRDV-PTSKDPAKLPYDDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDCNRDGFSVLLDVQHGFYARVWSDPVEMPTFC 465 R+ NR + +L+P ++ R +LD+GCSEGSIT +G + EN HGCDVRD+ T + + S+ N F +VT LM+ HH++++ + E++R+L PGG L+ REHDC+ S+ LD+ HG Y+ VWS P EMP FC Sbjct: 430 RTSNRSNKIKELIPKSLKVRN-----MLDIGCSEGSITQAVGHELGLTKENIHGCDVRDIGKTYTNDFTFHLISEQSNHLPFANNSFSLVTALMSFHHIKNVEETIKEVYRILEPGGALIIREHDCSPPETSLTLDIMHGLYSLVWSSPREMPNFC 580
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: A0A6A5BGC1_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BGC1_NAEFO) HSP 1 Score: 114 bits (286), Expect = 1.310e-29 Identity = 57/155 (36.77%), Postives = 84/155 (54.19%), Query Frame = 1 Query: 1 RSDNRGVAVFQLLPNAVLQRETSTFKLLDVGCSEGSITALLGEAFSIKPENTHGCDVRDVPTSKDPAKLPYDDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDCNRDGFSVLLDVQHGFYARVWSDPVEMPTFC 465 R+ NR + +L+P ++ R +LD+GCSEGSIT +G + EN HG + + S N F +VT LM+ HH++++ + E++R+L PGG L+ REHDC+ S+ LD+ HG Y+ VWS P EMP FC Sbjct: 12 RTSNRSNKIKELIPKSLKVRN-----MLDIGCSEGSITQAVGHELGLTKENIHGLNNPIIYLS-------------------NNSFSLVTALMSFHHIKNVEETIKEVYRILEPGGALIIREHDCSPPETSLTLDIMHGLYSLVWSSPREMPNFC 142
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: A0A7S1TQS3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQS3_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.740e-26 Identity = 59/150 (39.33%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 49 VLQRETSTFKLLDVGCSEGSITALLGEAFSIKPENTHGCDVRDVPTSK---------DPAKLPYDDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDC---NRDGFSVLLDVQHGFYARVWSDPVEMPTF 462 ++ + S +LD+GC+EGSITA +G A + PE+ HG D+RDV ++ D A LP++ D V LMTLHH+++ + +L+E HR+ + G L+ REHDC + D +V LDV HG YA SDP E P F Sbjct: 365 IIPKGFSVGSMLDIGCAEGSITAAIGSALHLSPEDVHGVDIRDVGNAEAEGFTFHVYDGATLPFESGS----------IDFVVALMTLHHIQEPSRVLSEAHRICSDNGYLIIREHDCATAHGDDATVALDVVHGLYALAMSDPPEWPGF 504
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: A0A7S1KTH7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KTH7_9EUKA) HSP 1 Score: 100 bits (248), Expect = 1.440e-21 Identity = 60/160 (37.50%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 1 RSDNRGVAVFQLLPNAVLQRETSTFKLLDVGCSEGSITALLGEAFSIKPENTHGCDVRDVPTSKDPAKLPY-----DDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDCNRDGFSVLLDVQHGFYARVWSDPVEMPTFC 465 R ++R + +LPN + E + LDVGC++GSITA L + S G DVRDV T + K + +D L N D+V C+M+LHH++++ L E+ RV+ G LV REHDC +D + LDV HG Y V+++P+E FC Sbjct: 223 RFNSRVQDILSVLPNRNYEPEIA----LDVGCADGSITASLRDQIS-SVGRVVGVDVRDVRTERTTDKFEFVLLDENDTFKVESLE-NESVDLVVCMMSLHHIKNIDATLDELRRVMKKGAFLVIREHDCFKDEARLFLDVVHGMYGLVFTEPMEDENFC 376
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: A0A3G5AHP3_9VIRU (Methyltransf_11 domain-containing protein n=1 Tax=Sylvanvirus sp. TaxID=2487774 RepID=A0A3G5AHP3_9VIRU) HSP 1 Score: 92.0 bits (227), Expect = 6.710e-19 Identity = 52/155 (33.55%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 82 LDVGCSEGSITALLGEAFSIKPENTHGCDVRDVP-----------------------------------TSKDPAK-LPYDDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDCNRDGFSVLLDVQHGFYARVWS 438 LD+GC +G+IT + + + I P++ HGCD+ DV TSK+ K LPY+ + FDVV LM+ HH++++ + +++RVL P GVL+ REHD SV+LDV HG Y RVW+ Sbjct: 199 LDIGCGDGTITKAIAQLYHIPPQHAHGCDIYDVQKVDVTPSQELKEXXXXXXXXQLKETSITFTLLQDTTSKNGEKVLPYESES----------FDVVFALMSFHHMKNVEATIQDLYRVLRPHGVLILREHDLYLPNLSVVLDVVHGLYDRVWN 343
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: A0A816D376_9BILA (Hypothetical protein n=7 Tax=Rotaria TaxID=231623 RepID=A0A816D376_9BILA) HSP 1 Score: 82.0 bits (201), Expect = 1.560e-15 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 31 QLLPNAVLQRETSTFKLLDVGCSEGSITALLGEAFSIKPENTHGCDVRDVPTSKDPAKLPYDDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDCNRDGFSVLLDVQH 414 +L N ++ +E S D+GC G ITA +G F+IK EN +G DV + ++ + D S LS + ++TCL+TLHH+E++ +ML E+ R++ P G L+ REHDC + SVL H Sbjct: 139 KLYNNELINKE-SIDSYFDLGCGNGLITARIGNHFNIKKENIYGGDVFNS-NNEQITHVSIDQNQSIIDLS-DQSVSLITCLVTLHHIENIDNMLNELARIIKPNGYLLIREHDCKLER-SVLTKYLH 262
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: X6P150_RETFI (Methyltransf_11 domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6P150_RETFI) HSP 1 Score: 80.1 bits (196), Expect = 1.080e-14 Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 43 NAVLQRETSTFKLLDVGCSEGSITALLGEAFSI--KPENTHGCDVRDVPTS------KDPAKLPYDDKMSHCRLSCNFRFDVVTCLMTLHHVED---LTHMLTEIHRVLNPGGVLVFREHDCNRDGFSVLLDVQHGFYARVWSDPVEMPTF 462 N + +TS K+LDVGC G I A++G+ + K E G DV + + YD ++ + FD + L TLHH+E+ L + EI RVL P G ++ REHDCN L++++H Y++V ++ V++ + Sbjct: 210 NCLFGEDTSEIKILDVGCGNGDILAMMGDLLKVQNKKEQLFGVDVDSFHGECVHRFENEITFVKYDG--TNLTAFADNTFDFIIALQTLHHIENSQQLKVLTQEISRVLKPRGYILVREHDCNTLSMKYLINLEHHLYSQVLAEHVDVKAY 358
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Match: A0A816D485_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A816D485_ADIRI) HSP 1 Score: 78.2 bits (191), Expect = 3.840e-14 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 28 FQLLPNAVLQRETSTFKL-LDVGCSEGSITALLGEAFSIKPENTHGCDVRDVPTSKDPAK-LPYDDKMSHCRLSCNFRFDVVTCLMTLHHVEDLTHMLTEIHRVLNPGGVLVFREHDCNRD 384 F+ LP + + + + K D+GC+ G ITA LG +K EN G DV P D +P + L + R D+VTCL+TLHH+ + +L E+ R++ PGG L+ REHDC + Sbjct: 124 FKTLPFDLNKIDKNQIKAYFDLGCNTGVITAALGAYLGLKKENIFGGDV--YPVENDHVTFIPMHESEGIINLPDD-RVDLVTCLVTLHHITHIDSILVELARIIRPGGYLILREHDCRME 241 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100352.128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100352.128.1 >prot_H-fluviatilis_contig100352.128.1 ID=prot_H-fluviatilis_contig100352.128.1|Name=mRNA_H-fluviatilis_contig100352.128.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=155bp RSDNRGVAVFQLLPNAVLQRETSTFKLLDVGCSEGSITALLGEAFSIKPEback to top mRNA from alignment at H-fluviatilis_contig100352:214..856+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100352.128.1 ID=mRNA_H-fluviatilis_contig100352.128.1|Name=mRNA_H-fluviatilis_contig100352.128.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=643bp|location=Sequence derived from alignment at H-fluviatilis_contig100352:214..856+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100352:214..856+ >mRNA_H-fluviatilis_contig100352.128.1 ID=mRNA_H-fluviatilis_contig100352.128.1|Name=mRNA_H-fluviatilis_contig100352.128.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=930bp|location=Sequence derived from alignment at H-fluviatilis_contig100352:214..856+ (Heribaudiella fluviatilis SAG_13_90)back to top |