Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 402 |
| Cds size | 402 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929002.6704104-CDS-H-fluviatilis_contig100337:115..517 | 1622929002.6704104-CDS-H-fluviatilis_contig100337:115..517 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100337 116..517 + |
| 1691135147.3806512-CDS-H-fluviatilis_contig100337:115..517 | 1691135147.3806512-CDS-H-fluviatilis_contig100337:115..517 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100337 116..517 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100337.125.1 >prot_H-fluviatilis_contig100337.125.1 ID=prot_H-fluviatilis_contig100337.125.1|Name=mRNA_H-fluviatilis_contig100337.125.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=134bp
IRRYFLPFALAFALALGRPLAFVLEENVDLRLIAALFLAPSRIVILLNLV
FVHPIKRATSFHVQQIRFSFLRSIVSIIPPTPYTPSPLFYVRILPLVFYP
SPVLLPLLLLPLCRLSDVVLLLLNTGFAWILRY* back to topmRNA from alignment at H-fluviatilis_contig100337:116..517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig100337.125.1 ID=mRNA_H-fluviatilis_contig100337.125.1|Name=mRNA_H-fluviatilis_contig100337.125.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=402bp|location=Sequence derived from alignment at H-fluviatilis_contig100337:116..517+ (Heribaudiella fluviatilis SAG_13_90)
ATCCGCCGATATTTTCTTCCCTTTGCCCTTGCCTTTGCCCTTGCTCTTGG
ACGCCCACTTGCCTTCGTCCTCGAAGAGAATGTCGACCTCCGGCTTATAG
CGGCGCTTTTTCTTGCTCCTTCTCGAATTGTGATACTCTTGAACCTCGTC
TTCGTCCATCCCATCAAACGCGCCACTTCGTTTCATGTACAACAGATCCG
CTTCAGTTTCCTCCGGAGTATAGTCTCGATCATACCCCCTACTCCATATA
CCCCTTCCCCCCTCTTCTATGTCCGAATCCTCCCCCTCGTCTTCTACCCT
TCGCCTGTTCTTCTTCCGCTTCTCCTGCTTCCCCTGTGTCGGCTTTCCGA
CGTCGTCCTTCTCCTCCTCAATACCGGCTTCGCTTGGATCCTCAGGTATT
AA back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig100337:116..517+ >mRNA_H-fluviatilis_contig100337.125.1 ID=mRNA_H-fluviatilis_contig100337.125.1|Name=mRNA_H-fluviatilis_contig100337.125.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=804bp|location=Sequence derived from alignment at H-fluviatilis_contig100337:116..517+ (Heribaudiella fluviatilis SAG_13_90)
ATCCGCCGATATTTTCTTCCCTTTGCCCTTGCCTTTGCCCTTGCTCTTGG
ACGCCCACTTGCCTTCGTCCTCGAAGAGAATGTCGACCTCCGGCTTATAG
CGGCGCTTTTTCTTGCTCCTTCTCGAATTGTGATACTCTTGAACCTCGTC
TTCGTCCATCCCATCAAACGCGCCACTTCGTTTCATGTACAACAGATCCG
CTTCAGTTTCCTCCGGAGTATAGTCTCGATCATACCCCCTACTCCATATA
CCCCTTCCCCCCTCTTCTATGTCCGAATCCTCCCCCTCGTCTTCTACCCT
TCGCCTGTTCTTCTTCCGCTTCTCCTGCTTCCCCTGTGTCGGCTTTCCGA
CGTCGTCCTTCTCCTCCTCAATACCGGCTTCGCTTGGATCCTCAGGTATT
AAATCCGCCGATATTTTCTTCCCTTTGCCCTTGCCTTTGCCCTTGCTCTT
GGACGCCCACTTGCCTTCGTCCTCGAAGAGAATGTCGACCTCCGGCTTAT
AGCGGCGCTTTTTCTTGCTCCTTCTCGAATTGTGATACTCTTGAACCTCG
TCTTCGTCCATCCCATCAAACGCGCCACTTCGTTTCATGTACAACAGATC
CGCTTCAGTTTCCTCCGGAGTATAGTCTCGATCATACCCCCTACTCCATA
TACCCCTTCCCCCCTCTTCTATGTCCGAATCCTCCCCCTCGTCTTCTACC
CTTCGCCTGTTCTTCTTCCGCTTCTCCTGCTTCCCCTGTGTCGGCTTTCC
GACGTCGTCCTTCTCCTCCTCAATACCGGCTTCGCTTGGATCCTCAGGTA
TTAA back to top
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