mRNA_H-fluviatilis_contig10030.117.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig10030.117.1
Unique NamemRNA_H-fluviatilis_contig10030.117.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: F1A489_DICPU (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A489_DICPU)

HSP 1 Score: 67.4 bits (163), Expect = 1.060e-11
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1 
Query:  100 EVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375
            EV + L+ G P  AL V++A+PP   K   +KD  A  V+  L S  E D+  ++  LN E+ + +MKYVY+G+ +G N A   KWH  +  +
Sbjct:   30 EVTKALNMGKPQDALAVALADPPIYTKTAAIKDQNATIVLNLLGSFKEKDVETSVESLNDEQLDVLMKYVYRGLAVGENSAIFFKWHECVLKK 122
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A0K0FR36_STRVS (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0FR36_STRVS)

HSP 1 Score: 67.4 bits (163), Expect = 1.520e-11
Identity = 38/99 (38.38%), Postives = 63/99 (63.64%), Query Frame = 1 
Query:  103 VERYLSQGNPLKALQVSIANPP-NAKD-DKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGL---GANCAALLKWHSALYDRVIH 384
            V++ L+ G   +AL+ ++ NPP N K+ D + + A ATVV+ L +   A+I  ++ +LN +E + +MKY+YKGM +   G+ C +LL WHS  ++R  H
Sbjct:   44 VQQLLTSGKNAEALKAALCNPPLNVKNMDGILEKAVATVVKTLTNHRNAEIRDSIKELNDDEVDILMKYIYKGMEIMPDGSVCNSLLSWHSHAFERCGH 142
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A8J4UWY0_9MYCE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UWY0_9MYCE)

HSP 1 Score: 66.6 bits (161), Expect = 2.050e-11
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 1 
Query:  100 EVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375
            E  + L+ G P  AL +++A+PP   K   +KD  A  V+  L    E DI  ++N LN ++ + +MKY+Y+G+  G N A  LKWH  +  +
Sbjct:   29 ECTKALNMGKPQDALPIALADPPIYTKTQAIKDQNATVVLSLLGGFKEKDIEASVNGLNDDQLDVLMKYIYRGLAAGENSAVFLKWHEVVLKK 121
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A7S0HUQ6_9CRYP (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUQ6_9CRYP)

HSP 1 Score: 65.9 bits (159), Expect = 3.560e-11
Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 1 
Query:   88 AVKEEVERYLSQ-GNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375
            A++E  ++ L     P  AL+ ++A+PP   +  +V+  +   VV+A+A + E DIA  + +L+ EEQ+ +MKY+Y+G+     C+ALLKWH+ L D+
Sbjct:   18 AIQEREKQVLQHMSRPSAALKAALADPPYGTESPEVRKSSMKVVVKAIAGVPEKDIAGIVEELSGEEQDVLMKYLYRGLEEVEACSALLKWHAILTDK 115
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A0H5R263_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R263_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 1.280e-10
Identity = 33/99 (33.33%), Postives = 60/99 (60.61%), Query Frame = 1 
Query:   82 QQAVKEEVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375
            Q  +K E  R + +    KAL  +++ PP ++ D  VKDLA   V++ + +I + D+   +  L+ + Q+ ++KYVY+G  +G +C A+LKWH+ + +R
Sbjct:   12 QMEMKVEETRSILKVGAAKALLHAMSAPPFSSPDQVVKDLARDAVLECILAIRDEDVDNVIGSLSLDNQDLLLKYVYRGFAIGDSCNAILKWHAKIVER 110
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A0N7L953_9BASI (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A0N7L953_9BASI)

HSP 1 Score: 64.3 bits (155), Expect = 2.230e-10
Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 1 
Query:  100 EVERYLSQGNPLKALQVSIANPPNAKD-DKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMG---LGANCAALLKWHSALYD 372
            EV   + +G+   AL V +A PP + D ++ K L  AT+++   S   +DIA  +  LN ++Q+S+MK++YKG+G   LGA+ A LL WH  L +
Sbjct:   43 EVRGLIGRGDAAGALAVVLAEPPYSPDAEEAKSLTLATILEVFNSTKSSDIASVVKALNVDQQDSLMKFIYKGLGKPELGAS-AVLLNWHDKLTE 136
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A060TF04_BLAAD (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TF04_BLAAD)

HSP 1 Score: 63.5 bits (153), Expect = 4.480e-10
Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 1 
Query:  103 VERYLSQGNPLKALQVSIANPPNAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMG--LG---ANCAALLKWHSALYD 372
            + + LS+G+ + ALQV++ NPP   D++ K+     V++ L +I  +DI + ++ L  E+QN ++KY+YKGMG  LG    N   LL W     D
Sbjct:   43 IRQQLSKGDYIGALQVALDNPPYGGDERTKETNLRNVLEVLTTIKSSDITQIVDQLTPEDQNVLIKYLYKGMGSPLGQSHGNGGILLSWFEKTVD 137
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A6F9D7V9_9ASCI (SAGA-associated factor 29 homolog n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D7V9_9ASCI)

HSP 1 Score: 65.9 bits (159), Expect = 5.620e-10
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 1 
Query:   97 EEVERYLSQGNPLKALQVSIAN-PPNAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGL---GANCAALLKWH 357
            +EV + L  GN  +AL+  +A+ P   KD   K+ A    ++ L+SI   D+A T+  LN EE +++MKY+YKG  +   G  CA LL WH
Sbjct:  334 QEVNQLLLGGNNAQALRTCLASLPVRTKDIATKENATLLTIRVLSSIKAGDVASTIQSLNIEELDAIMKYIYKGFSMNLDGQQCACLLTWH 424
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: ARPC5_DICDI (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ARPC5_DICDI)

HSP 1 Score: 62.4 bits (150), Expect = 8.990e-10
Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 1 
Query:  100 EVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375
            EV + L+ G P  AL V++A+PP   K   +KD  A  V+  L S  + D+  ++  LN ++ + +MKYVY+G+  G N     KWH  +  +
Sbjct:   30 EVTKALNAGKPQDALNVALADPPIYTKTGAIKDQNATIVLNLLGSFKDKDVETSVETLNDDQLDILMKYVYRGLATGENSPIFFKWHECVLKK 122
[Close]
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: L1JCW3_GUITC (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JCW3_GUITC)

HSP 1 Score: 62.0 bits (149), Expect = 9.340e-10
Identity = 35/98 (35.71%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:   85 QAVKEEVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375
            QA +++V + LS+  P  AL+ ++ +PP +AK   V+  +   VV+A+  + E +IA  +++L+ EEQ+ +MKY+Y+G+     C +LLKWH+ L ++
Sbjct:   13 QAREKQVLQLLSR--PSAALKAALTDPPYSAKSPDVRKSSMKVVVKAIQGVQEKEIAGVIDELSGEEQDVLMKYLYRGLEEVEACNSLLKWHAILTEK 108
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F1A489_DICPU1.060e-1137.63Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0K0FR36_STRVS1.520e-1138.38Actin-related protein 2/3 complex subunit 5 n=2 Ta... [more]
A0A8J4UWY0_9MYCE2.050e-1135.48Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A7S0HUQ6_9CRYP3.560e-1136.73Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0H5R263_9EUKA1.280e-1033.33Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0N7L953_9BASI2.230e-1038.95Actin-related protein 2/3 complex subunit 5 n=2 Ta... [more]
A0A060TF04_BLAAD4.480e-1036.84Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A6F9D7V9_9ASCI5.620e-1039.56SAGA-associated factor 29 homolog n=1 Tax=Phallusi... [more]
ARPC5_DICDI8.990e-1034.41Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
L1JCW3_GUITC9.340e-1035.71Actin-related protein 2/3 complex subunit 5 n=2 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig10030contigH-fluviatilis_contig10030:154..914 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score68.2
Seed ortholog evalue3.3e-09
Seed eggNOG ortholog5786.XP_003294483.1
Preferred nameARPC5
KEGG koko:K05754,ko:K14016
KEGG Pathwayko04141,ko04144,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,map04141,map04144,map04666,map04810,map05100,map05130,map05131,map05132
KEGG ModuleM00400,M00403
GOsGO:0000001,GO:0000147,GO:0000902,GO:0000904,GO:0001667,GO:0001775,GO:0002009,GO:0002252,GO:0002253,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003779,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005826,GO:0005829,GO:0005856,GO:0005885,GO:0005937,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006955,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0009653,GO:0009790,GO:0009825,GO:0009888,GO:0009987,GO:0010026,GO:0010090,GO:0010631,GO:0010638,GO:0012505,GO:0012506,GO:0014812,GO:0014909,GO:0015629,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016331,GO:0016477,GO:0019867,GO:0019898,GO:0021761,GO:0021769,GO:0022607,GO:0023052,GO:0030011,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030139,GO:0030141,GO:0030154,GO:0030175,GO:0030424,GO:0030426,GO:0030427,GO:0030479,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030900,GO:0031090,GO:0031097,GO:0031143,GO:0031252,GO:0031312,GO:0031315,GO:0031334,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032153,GO:0032155,GO:0032271,GO:0032273,GO:0032501,GO:0032502,GO:0032535,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033043,GO:0033267,GO:0034314,GO:0034622,GO:0034774,GO:0036230,GO:0038093,GO:0038094,GO:0038096,GO:0040007,GO:0040011,GO:0042119,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043299,GO:0043312,GO:0043332,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044455,GO:0044463,GO:0044464,GO:0044877,GO:0045010,GO:0045055,GO:0045321,GO:0045335,GO:0046903,GO:0048013,GO:0048308,GO:0048311,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051015,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051258,GO:0051286,GO:0051493,GO:0051495,GO:0051639,GO:0051640,GO:0051641,GO:0051646,GO:0051674,GO:0051716,GO:0060205,GO:0060322,GO:0060429,GO:0061024,GO:0061645,GO:0061842,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070938,GO:0071840,GO:0071944,GO:0090066,GO:0090130,GO:0090132,GO:0090558,GO:0090626,GO:0097159,GO:0097435,GO:0097458,GO:0097581,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:0098858,GO:0099503,GO:0099568,GO:0099738,GO:0101002,GO:0110053,GO:0120025,GO:0120036,GO:0120038,GO:0150034,GO:1901363,GO:1902903,GO:1902905,GO:1904813
EggNOG free text desc.Functions as component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks
EggNOG OGs3X9CR@554915,KOG3380@1,KOG3380@2759
COG Functional cat.Z
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Exons4
Model size393
Cds size393
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig10030.117.1prot_H-fluviatilis_contig10030.117.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig10030 154..914 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929001.743388-CDS-H-fluviatilis_contig10030:153..2621622929001.743388-CDS-H-fluviatilis_contig10030:153..262Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10030 154..262 -
1691135146.8294144-CDS-H-fluviatilis_contig10030:153..2621691135146.8294144-CDS-H-fluviatilis_contig10030:153..262Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10030 154..262 -
1622929001.7552087-CDS-H-fluviatilis_contig10030:445..5371622929001.7552087-CDS-H-fluviatilis_contig10030:445..537Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10030 446..537 -
1691135146.8452718-CDS-H-fluviatilis_contig10030:445..5371691135146.8452718-CDS-H-fluviatilis_contig10030:445..537Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10030 446..537 -
1622929001.765715-CDS-H-fluviatilis_contig10030:639..7091622929001.765715-CDS-H-fluviatilis_contig10030:639..709Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10030 640..709 -
1691135146.8649013-CDS-H-fluviatilis_contig10030:639..7091691135146.8649013-CDS-H-fluviatilis_contig10030:639..709Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10030 640..709 -
1622929001.777135-CDS-H-fluviatilis_contig10030:792..9141622929001.777135-CDS-H-fluviatilis_contig10030:792..914Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10030 793..914 -
1691135146.882071-CDS-H-fluviatilis_contig10030:792..9141691135146.882071-CDS-H-fluviatilis_contig10030:792..914Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10030 793..914 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig10030.117.1

>prot_H-fluviatilis_contig10030.117.1 ID=prot_H-fluviatilis_contig10030.117.1|Name=mRNA_H-fluviatilis_contig10030.117.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=131bp
HRDHKKHQQTKMADKGEKEGKQTTIQEQQAVKEEVERYLSQGNPLKALQV
SIANPPNAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMK
YVYKGMGLGANCAALLKWHSALYDRVIHSR*
back to top

mRNA from alignment at H-fluviatilis_contig10030:154..914-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10030.117.1 ID=mRNA_H-fluviatilis_contig10030.117.1|Name=mRNA_H-fluviatilis_contig10030.117.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=761bp|location=Sequence derived from alignment at H-fluviatilis_contig10030:154..914- (Heribaudiella fluviatilis SAG_13_90)
CACCGGGATCACAAGAAACACCAGCAGACGAAAATGGCAGACAAGGGTGA
GAAAGAGGGCAAGCAAACCACTATCCAAGAGCAACAGGCTGTGAAAGAAG
AGGTGGAGCGATATCTTTCTCAGTAAGTGGCTTGTTTGCGCTTGTTTCTG
ACTCAGTGTTGTGTTGGGCGGTTCCAGCGCTTCCTTTCTCATTGGCTTTT
GACAGGGGCAATCCTTTGAAAGCTTTGCAAGTCTCGATTGCTAACCCTCC
CAACGCAAAAGATGACAAAGTCAAGGTGAGTTTCTATCGGTTTCGGGCCG
GTTACACCATGTGTGCTTCTTGACTTGGCGGTGAAGCTGTGCTGTTGTAT
GTGGCTTTGATTGTGTCCTGCTTGTAGGATTTGGCTGCTGCCACTGTTGT
GCAAGCCCTGGCCTCTATCAGTGAGGCTGACATTGCCCGGACACTGAATG
ACCTGAACGCAGAAGAACAGTACGTAGTTAATGTTTCAACACAGTGCACG
TAAGGCGTTGCGCAGAGAGCGTTTGTACTTTCAACCCGATCGTACTTCCT
CTCTGGTGACTGCACTGCAACTGAGCTTTGTCTGGAGTTGGTTGTGCTCC
ATCTGCTTTGTGCGGCCGACGTGTGTAAAACTCACCCATGGATGTTCTGT
AGGAACTCGGTGATGAAGTACGTGTACAAAGGCATGGGATTGGGCGCCAA
CTGCGCCGCTTTGCTGAAGTGGCATTCGGCTCTTTATGATCGGGTGATAC
ACTCACGTTGA
back to top

Coding sequence (CDS) from alignment at H-fluviatilis_contig10030:154..914-

>mRNA_H-fluviatilis_contig10030.117.1 ID=mRNA_H-fluviatilis_contig10030.117.1|Name=mRNA_H-fluviatilis_contig10030.117.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=786bp|location=Sequence derived from alignment at H-fluviatilis_contig10030:154..914- (Heribaudiella fluviatilis SAG_13_90)
CACCGGGATCACAAGAAACACCAGCAGACGAAAATGGCAGACAAGGGTGA
GAAAGAGGGCAAGCAAACCACTATCCAAGAGCAACAGGCTGTGAAAGAAG
AGGTGGAGCGATATCTTTCTCACACCGGGATCACAAGAAACACCAGCAGA
CGAAAATGGCAGACAAGGGTGAGAAAGAGGGCAAGCAAACCACTATCCAA
GAGCAACAGGCTGTGAAAGAAGAGGTGGAGCGATATCTTTCTCAGGGCAA
TCCTTTGAAAGCTTTGCAAGTCTCGATTGCTAACCCTCCCAACGCAAAAG
ATGACAAAGTCAAGGGGCAATCCTTTGAAAGCTTTGCAAGTCTCGATTGC
TAACCCTCCCAACGCAAAAGATGACAAAGTCAAGGATTTGGCTGCTGCCA
CTGTTGTGCAAGCCCTGGCCTCTATCAGTGAGGCTGACATTGCCCGGACA
CTGAATGACCTGAACGCAGAAGAACAGATTTGGCTGCTGCCACTGTTGTG
CAAGCCCTGGCCTCTATCAGTGAGGCTGACATTGCCCGGACACTGAATGA
CCTGAACGCAGAAGAACAGAACTCGGTGATGAAGTACGTGTACAAAGGCA
TGGGATTGGGCGCCAACTGCGCCGCTTTGCTGAAGTGGCATTCGGCTCTT
TATGATCGGGTGATACACTCACGTTGAGAACTCGGTGATGAAGTACGTGT
ACAAAGGCATGGGATTGGGCGCCAACTGCGCCGCTTTGCTGAAGTGGCAT
TCGGCTCTTTATGATCGGGTGATACACTCACGTTGA
back to top