mRNA_H-fluviatilis_contig10030.117.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: F1A489_DICPU (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A489_DICPU) HSP 1 Score: 67.4 bits (163), Expect = 1.060e-11 Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1 Query: 100 EVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375 EV + L+ G P AL V++A+PP K +KD A V+ L S E D+ ++ LN E+ + +MKYVY+G+ +G N A KWH + + Sbjct: 30 EVTKALNMGKPQDALAVALADPPIYTKTAAIKDQNATIVLNLLGSFKEKDVETSVESLNDEQLDVLMKYVYRGLAVGENSAIFFKWHECVLKK 122
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A0K0FR36_STRVS (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0FR36_STRVS) HSP 1 Score: 67.4 bits (163), Expect = 1.520e-11 Identity = 38/99 (38.38%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 103 VERYLSQGNPLKALQVSIANPP-NAKD-DKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGL---GANCAALLKWHSALYDRVIH 384 V++ L+ G +AL+ ++ NPP N K+ D + + A ATVV+ L + A+I ++ +LN +E + +MKY+YKGM + G+ C +LL WHS ++R H Sbjct: 44 VQQLLTSGKNAEALKAALCNPPLNVKNMDGILEKAVATVVKTLTNHRNAEIRDSIKELNDDEVDILMKYIYKGMEIMPDGSVCNSLLSWHSHAFERCGH 142
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A8J4UWY0_9MYCE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UWY0_9MYCE) HSP 1 Score: 66.6 bits (161), Expect = 2.050e-11 Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 100 EVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375 E + L+ G P AL +++A+PP K +KD A V+ L E DI ++N LN ++ + +MKY+Y+G+ G N A LKWH + + Sbjct: 29 ECTKALNMGKPQDALPIALADPPIYTKTQAIKDQNATVVLSLLGGFKEKDIEASVNGLNDDQLDVLMKYIYRGLAAGENSAVFLKWHEVVLKK 121
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A7S0HUQ6_9CRYP (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUQ6_9CRYP) HSP 1 Score: 65.9 bits (159), Expect = 3.560e-11 Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 88 AVKEEVERYLSQ-GNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375 A++E ++ L P AL+ ++A+PP + +V+ + VV+A+A + E DIA + +L+ EEQ+ +MKY+Y+G+ C+ALLKWH+ L D+ Sbjct: 18 AIQEREKQVLQHMSRPSAALKAALADPPYGTESPEVRKSSMKVVVKAIAGVPEKDIAGIVEELSGEEQDVLMKYLYRGLEEVEACSALLKWHAILTDK 115
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A0H5R263_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R263_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 1.280e-10 Identity = 33/99 (33.33%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 82 QQAVKEEVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375 Q +K E R + + KAL +++ PP ++ D VKDLA V++ + +I + D+ + L+ + Q+ ++KYVY+G +G +C A+LKWH+ + +R Sbjct: 12 QMEMKVEETRSILKVGAAKALLHAMSAPPFSSPDQVVKDLARDAVLECILAIRDEDVDNVIGSLSLDNQDLLLKYVYRGFAIGDSCNAILKWHAKIVER 110
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A0N7L953_9BASI (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A0N7L953_9BASI) HSP 1 Score: 64.3 bits (155), Expect = 2.230e-10 Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 100 EVERYLSQGNPLKALQVSIANPPNAKD-DKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMG---LGANCAALLKWHSALYD 372 EV + +G+ AL V +A PP + D ++ K L AT+++ S +DIA + LN ++Q+S+MK++YKG+G LGA+ A LL WH L + Sbjct: 43 EVRGLIGRGDAAGALAVVLAEPPYSPDAEEAKSLTLATILEVFNSTKSSDIASVVKALNVDQQDSLMKFIYKGLGKPELGAS-AVLLNWHDKLTE 136
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A060TF04_BLAAD (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TF04_BLAAD) HSP 1 Score: 63.5 bits (153), Expect = 4.480e-10 Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 103 VERYLSQGNPLKALQVSIANPPNAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMG--LG---ANCAALLKWHSALYD 372 + + LS+G+ + ALQV++ NPP D++ K+ V++ L +I +DI + ++ L E+QN ++KY+YKGMG LG N LL W D Sbjct: 43 IRQQLSKGDYIGALQVALDNPPYGGDERTKETNLRNVLEVLTTIKSSDITQIVDQLTPEDQNVLIKYLYKGMGSPLGQSHGNGGILLSWFEKTVD 137
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: A0A6F9D7V9_9ASCI (SAGA-associated factor 29 homolog n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D7V9_9ASCI) HSP 1 Score: 65.9 bits (159), Expect = 5.620e-10 Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 97 EEVERYLSQGNPLKALQVSIAN-PPNAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGL---GANCAALLKWH 357 +EV + L GN +AL+ +A+ P KD K+ A ++ L+SI D+A T+ LN EE +++MKY+YKG + G CA LL WH Sbjct: 334 QEVNQLLLGGNNAQALRTCLASLPVRTKDIATKENATLLTIRVLSSIKAGDVASTIQSLNIEELDAIMKYIYKGFSMNLDGQQCACLLTWH 424
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: ARPC5_DICDI (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ARPC5_DICDI) HSP 1 Score: 62.4 bits (150), Expect = 8.990e-10 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 100 EVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375 EV + L+ G P AL V++A+PP K +KD A V+ L S + D+ ++ LN ++ + +MKYVY+G+ G N KWH + + Sbjct: 30 EVTKALNAGKPQDALNVALADPPIYTKTGAIKDQNATIVLNLLGSFKDKDVETSVETLNDDQLDILMKYVYRGLATGENSPIFFKWHECVLKK 122
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Match: L1JCW3_GUITC (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JCW3_GUITC) HSP 1 Score: 62.0 bits (149), Expect = 9.340e-10 Identity = 35/98 (35.71%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 85 QAVKEEVERYLSQGNPLKALQVSIANPP-NAKDDKVKDLAAATVVQALASISEADIARTLNDLNAEEQNSVMKYVYKGMGLGANCAALLKWHSALYDR 375 QA +++V + LS+ P AL+ ++ +PP +AK V+ + VV+A+ + E +IA +++L+ EEQ+ +MKY+Y+G+ C +LLKWH+ L ++ Sbjct: 13 QAREKQVLQLLSR--PSAALKAALTDPPYSAKSPDVRKSSMKVVVKAIQGVQEKEIAGVIDELSGEEQDVLMKYLYRGLEEVEACNSLLKWHAILTEK 108 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10030.117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10030.117.1 >prot_H-fluviatilis_contig10030.117.1 ID=prot_H-fluviatilis_contig10030.117.1|Name=mRNA_H-fluviatilis_contig10030.117.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=131bp HRDHKKHQQTKMADKGEKEGKQTTIQEQQAVKEEVERYLSQGNPLKALQVback to top mRNA from alignment at H-fluviatilis_contig10030:154..914- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10030.117.1 ID=mRNA_H-fluviatilis_contig10030.117.1|Name=mRNA_H-fluviatilis_contig10030.117.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=761bp|location=Sequence derived from alignment at H-fluviatilis_contig10030:154..914- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10030:154..914- >mRNA_H-fluviatilis_contig10030.117.1 ID=mRNA_H-fluviatilis_contig10030.117.1|Name=mRNA_H-fluviatilis_contig10030.117.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=786bp|location=Sequence derived from alignment at H-fluviatilis_contig10030:154..914- (Heribaudiella fluviatilis SAG_13_90)back to top |