Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 3 |
Model size | 425 |
Cds size | 423 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622929000.750983-CDS-H-fluviatilis_contig100267:154..328 | 1622929000.750983-CDS-H-fluviatilis_contig100267:154..328 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100267 155..328 + |
1691135146.1379173-CDS-H-fluviatilis_contig100267:154..328 | 1691135146.1379173-CDS-H-fluviatilis_contig100267:154..328 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100267 155..328 + |
1622929000.762548-CDS-H-fluviatilis_contig100267:363..457 | 1622929000.762548-CDS-H-fluviatilis_contig100267:363..457 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100267 364..457 + |
1691135146.150905-CDS-H-fluviatilis_contig100267:363..457 | 1691135146.150905-CDS-H-fluviatilis_contig100267:363..457 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100267 364..457 + |
1622929000.7720401-CDS-H-fluviatilis_contig100267:493..648 | 1622929000.7720401-CDS-H-fluviatilis_contig100267:493..648 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100267 494..648 + |
1691135146.1623888-CDS-H-fluviatilis_contig100267:493..648 | 1691135146.1623888-CDS-H-fluviatilis_contig100267:493..648 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig100267 494..648 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100267.112.1 >prot_H-fluviatilis_contig100267.112.1 ID=prot_H-fluviatilis_contig100267.112.1|Name=mRNA_H-fluviatilis_contig100267.112.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=141bp
MAPGGVLPSFTHAPVAVRPSGTEPALSLSVANGGALPQTAGILPALLSAY QQQLKTAQVLLGANPPMVTLPQPAMAAANNSRKRSAMESGVDGGGVKVFK SASGAAPVSPTNGASQQSSSSALLPGAVVKSLLYSHNTFGV back to topmRNA from alignment at H-fluviatilis_contig100267:155..648+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig100267.112.1 ID=mRNA_H-fluviatilis_contig100267.112.1|Name=mRNA_H-fluviatilis_contig100267.112.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=494bp|location=Sequence derived from alignment at H-fluviatilis_contig100267:155..648+ (Heribaudiella fluviatilis SAG_13_90) ATGGCGCCAGGCGGTGTGCTACCGTCGTTCACACACGCCCCCGTGGCGGT
GCGACCCAGTGGCACCGAGCCTGCGCTGAGTTTGAGTGTGGCCAACGGTG
GTGCACTGCCGCAAACCGCCGGAATTCTGCCGGCGTTGCTGTCGGCGTAC
CAACAGCAACTGAAAACCGCCCAGGTCTCTTGGATACGTGACCAACGCCT
TTTGTTCAGGTGCTGCTTGGAGCCAACCCACCCATGGTTACACTACCCCA
ACCCGCCATGGCAGCGGCTAACAACAGCCGCAAGCGAAGCGCCATGGAAT
CCGGTACTTTCTGTTGTGTTTGATCCCGCGCGTGGTCAGGCGTGGACGGC
GGTGGCGTGAAAGTCTTCAAATCGGCGAGCGGTGCGGCTCCAGTCTCACC
AACCAACGGCGCGTCGCAACAGTCCTCCTCGTCCGCTCTTTTGCCTGGTG
CGGTGGTGAAAAGTCTACTGTACTCCCACAACACCTTTGGGGTG back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig100267:155..648+ >mRNA_H-fluviatilis_contig100267.112.1 ID=mRNA_H-fluviatilis_contig100267.112.1|Name=mRNA_H-fluviatilis_contig100267.112.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=846bp|location=Sequence derived from alignment at H-fluviatilis_contig100267:155..648+ (Heribaudiella fluviatilis SAG_13_90) ATGGCGCCAGGCGGTGTGCTACCGTCGTTCACACACGCCCCCGTGGCGGT GCGACCCAGTGGCACCGAGCCTGCGCTGAGTTTGAGTGTGGCCAACGGTG GTGCACTGCCGCAAACCGCCGGAATTCTGCCGGCGTTGCTGTCGGCGTAC CAACAGCAACTGAAAACCGCCCAGATGGCGCCAGGCGGTGTGCTACCGTC GTTCACACACGCCCCCGTGGCGGTGCGACCCAGTGGCACCGAGCCTGCGC TGAGTTTGAGTGTGGCCAACGGTGGTGCACTGCCGCAAACCGCCGGAATT CTGCCGGCGTTGCTGTCGGCGTACCAACAGCAACTGAAAACCGCCCAGGT GCTGCTTGGAGCCAACCCACCCATGGTTACACTACCCCAACCCGCCATGG CAGCGGCTAACAACAGCCGCAAGCGAAGCGCCATGGAATCCGGTGCTGCT TGGAGCCAACCCACCCATGGTTACACTACCCCAACCCGCCATGGCAGCGG CTAACAACAGCCGCAAGCGAAGCGCCATGGAATCCGGCGTGGACGGCGGT GGCGTGAAAGTCTTCAAATCGGCGAGCGGTGCGGCTCCAGTCTCACCAAC CAACGGCGCGTCGCAACAGTCCTCCTCGTCCGCTCTTTTGCCTGGTGCGG TGGTGAAAAGTCTACTGTACTCCCACAACACCTTTGGGGTGGCGTGGACG GCGGTGGCGTGAAAGTCTTCAAATCGGCGAGCGGTGCGGCTCCAGTCTCA CCAACCAACGGCGCGTCGCAACAGTCCTCCTCGTCCGCTCTTTTGCCTGG TGCGGTGGTGAAAAGTCTACTGTACTCCCACAACACCTTTGGGGTG back to top
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