mRNA_H-fluviatilis_contig10024.107.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig10024.107.1
Unique NamemRNA_H-fluviatilis_contig10024.107.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 9.510e-29
Identity = 71/168 (42.26%), Postives = 100/168 (59.52%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEVEEE----SYAFVLEY--LDGNLVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSET-CPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAW 483
            GA+EKV+TRCCG G   +FWR+GVLV G +  +    ++A VLEY   D  L  +++G+     +W ALSY +S V+ MLVDFPGL    S  C +H D    + M   A   GD+LL  + CP C  + G LGA A+ LVR VD++  RD +FN ++ +F  L + +
Sbjct:  499 GAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDM---ARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQY 663
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.620e-28
Identity = 72/168 (42.86%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEV----EEESYAFVLEYLDGN--LVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELL-SETCPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAW 483
            GAIEK++TRCC  GT  +FWRFGVLV+G +      +++A ++EY      + +EVYG    A  WAALSY +SV Q M  +FPGL   AS  C +HE   +++ + + AT  GD+LL   TC +CD E G LGA A+ L+ MVD+++SR DL   +  +  K    +
Sbjct:  723 GAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHE---QDMQISRTATRRGDKLLHGATCNLCDSETGGLGAAAIDLLEMVDIRRSRGDLVRAVNRRLVKAQGRY 887
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 3.590e-28
Identity = 71/181 (39.23%), Postives = 101/181 (55.80%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEV----EEESYAFVLEY--LDGNLVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSET-CPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAWRRKYSLKDYPNEE 522
            GAIEKV+TRCCG G   +FWR+GVLV G +    E  ++A V+EY   D  L+ +++G+      W A SY +S V  MLVDFPGL      +C +H D    +    +AT  GD+ L  + CP C  + G LGA A+ L+R VD++  RD +FN ++ +F  L + +       D   EE
Sbjct:  812 GAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFV---NKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEE 989
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 7.750e-28
Identity = 75/181 (41.44%), Postives = 104/181 (57.46%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEVEEE----SYAFVLEYLD-GN-LVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSET-CPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAWRRKYSLKDYPNEE 522
            GAIEKV+TRCCG G   +FWR+GVLV G +  +    ++A VLEY   GN L  +++G      +W ALSY +S V+ MLVDFPGL    S  C +H D    +P    A   GD+LL  + CP C  + G LG  A+ LVR+VD++ +RD +FN ++ +F  L + +       D   EE
Sbjct:  326 GAIEKVLTRCCGLGRVRTFWRYGVLVHGGLGVQDGRSTFAVVLEYSSAGNELTAQIFGGISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDA---MPFVNMARSDGDKLLEGSRCPHCSEDTGGLGEAAIDLVRLVDIRLNRDVIFNGVKARFDDLESQYSFTLPTHDRSKEE 503
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 8.680e-28
Identity = 69/168 (41.07%), Postives = 98/168 (58.33%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEVEEE----SYAFVLEY--LDGNLVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSET-CPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAW 483
            GA+EKV+TRCCG G   +FWR+GVLV G    +    ++A VLEY   D  L  +++G+     +W ALSY +S V+ ML+DFPGL    S  C EH D    +    +A   GD+LL  + CP C  + G LGA A+ LVR VD++  RD +F  ++ +F  L + +
Sbjct:  360 GAVEKVLTRCCGLGVVRTFWRYGVLVHGSFGAQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVKLMLMDFPGLRWKGSLKCPEHGDAMLFV---DKARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQY 524
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.940e-27
Identity = 68/163 (41.72%), Postives = 92/163 (56.44%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEVEEES----YAFVLEY--LDGNLVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSETCPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKL 471
            GAIEKV+TRCCG G   +FWR+GVLV G + +      +A VLEY   D  L  +++G+ G    W ALSY +S V  MLVDFPGL    +  C +H D      M  + T  G+  L   CP C  E   LGA A+ L+RMVD++  R ++F+ +  +F  L
Sbjct:  614 GAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAML---MANKVTQAGETFLKRRCPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERFDAL 773
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 3.700e-27
Identity = 70/168 (41.67%), Postives = 95/168 (56.55%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEVEEES----YAFVLEYL--DGNLVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSET-CPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAW 483
            GAIEKV+TRCC  G   +FWR GVLV G V E+     +A VLEY   D  L  +++G+      W ALSY +S V  ML+DFPGL    S  C +H D    +P+    T  GD++L  + C  C P+   LGA A+ LVRMVD++  RD +F  ++ +F  L   +
Sbjct:  808 GAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDA---MPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQY 972
[Close]
BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 3.770e-27
Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEVEEES----YAFVLEY--LDGNLVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSETCPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAW 483
            GAIEKV+TRCCG G   +FWR+GVLV G + +      +A V+EY   D  L  +++G+      W ALSY +S V  MLVDFPGL       C +H +    +P   +    GD+ L   CP C PE   LGA A+ LV +VD++  RD +F  ++ +F  L + +
Sbjct:  878 GAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGN---EMPFANKVNRAGDKFLERKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQY 1041
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 1.150e-26
Identity = 72/191 (37.70%), Postives = 103/191 (53.93%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEVEEES----YAFVLEYL--DGNLVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSET-CPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAWRRKYSLKDYPNEEFTTPVNEDAA 552
            GAIEKV+TRCC  G   +FWR GVLV G + +E     +A VLEY   D  L  +++G+      W ALSY +S V+ ML+DFPGL    S  C +H D    +    + T  G +LL  + CP C P+   LGA A+ LV MVD++  RD +F  ++ +F +L + +    S     +E+      E+ A
Sbjct:  708 GAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLV---NKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVA 895
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BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.750e-25
Identity = 73/185 (39.46%), Postives = 108/185 (58.38%), Query Frame = 1 
Query:    1 GAIEKVITRCCGFGTPSSFWRFGVLVRGEV----EEESYAFVLEYLD--GNLVLEVYGEAGNAMSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHIGDELLSET-CPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKLPAAWRRKYS-LKDYPNEEFTT 531
            GA+EKV+TRCC  G   +FWRFGVLV+G +      +++A ++EY      + ++VYG       WAALS  +S V+ M   FPGL   AS  C EH+   +++P+   AT  GD+LL E  C +C  E G +GA A +L++MVDV Q+RD +F  +  +F  L    +R+Y  L+   + EF +
Sbjct:  861 GAVEKVLTRCCSIGELRTFWRFGVLVQGNMGGVTAGKTFAMLVEYSHKGSEIDIKVYGNIATTAPWAALSLGISAVRVMCSAFPGLRWCASLKCPEHK---QDMPISNTATRPGDKLLLEHGCTLCSSETGGVGAAATELLQMVDVLQNRDKMFREVHGRFVDL----QRQYPVLRPEKSREFNS 1038
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10024.107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5K1K4_9PHAE9.510e-2942.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FL89_ECTSI2.620e-2842.86LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI3.590e-2839.23LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L0H4_9PHAE7.750e-2841.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K516_9PHAE8.680e-2841.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G431_ECTSI1.940e-2741.72LRR-GTPase of the ROCO family, incomplete sequence... [more]
D7FUD0_ECTSI3.700e-2741.67LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LF46_ECTSI3.770e-2739.52LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC9_ECTSI1.150e-2637.70LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JME6_9PHAE1.750e-2539.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig10024contigH-fluviatilis_contig10024:1777..5414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score80.9
Seed ortholog evalue8.7e-13
Seed eggNOG ortholog2880.D7FL89
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1413
Cds size693
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig10024.107.1prot_H-fluviatilis_contig10024.107.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig10024 1948..4843 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929000.201911-UTR-H-fluviatilis_contig10024:1776..19471622929000.201911-UTR-H-fluviatilis_contig10024:1776..1947Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10024 1777..1947 +
1691135145.8953948-UTR-H-fluviatilis_contig10024:1776..19471691135145.8953948-UTR-H-fluviatilis_contig10024:1776..1947Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10024 1777..1947 +
1622929000.2941573-UTR-H-fluviatilis_contig10024:4843..53321622929000.2941573-UTR-H-fluviatilis_contig10024:4843..5332Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10024 4844..5332 +
1691135145.991288-UTR-H-fluviatilis_contig10024:4843..53321691135145.991288-UTR-H-fluviatilis_contig10024:4843..5332Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10024 4844..5332 +
1622929000.333482-UTR-H-fluviatilis_contig10024:5354..54141622929000.333482-UTR-H-fluviatilis_contig10024:5354..5414Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10024 5355..5414 +
1691135146.0168157-UTR-H-fluviatilis_contig10024:5354..54141691135146.0168157-UTR-H-fluviatilis_contig10024:5354..5414Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig10024 5355..5414 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929000.2176628-CDS-H-fluviatilis_contig10024:1947..20851622929000.2176628-CDS-H-fluviatilis_contig10024:1947..2085Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 1948..2085 +
1691135145.9200163-CDS-H-fluviatilis_contig10024:1947..20851691135145.9200163-CDS-H-fluviatilis_contig10024:1947..2085Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 1948..2085 +
1622929000.2352998-CDS-H-fluviatilis_contig10024:2234..23551622929000.2352998-CDS-H-fluviatilis_contig10024:2234..2355Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 2235..2355 +
1691135145.9306324-CDS-H-fluviatilis_contig10024:2234..23551691135145.9306324-CDS-H-fluviatilis_contig10024:2234..2355Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 2235..2355 +
1622929000.2527947-CDS-H-fluviatilis_contig10024:2748..28761622929000.2527947-CDS-H-fluviatilis_contig10024:2748..2876Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 2749..2876 +
1691135145.9426534-CDS-H-fluviatilis_contig10024:2748..28761691135145.9426534-CDS-H-fluviatilis_contig10024:2748..2876Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 2749..2876 +
1622929000.2678976-CDS-H-fluviatilis_contig10024:3739..38051622929000.2678976-CDS-H-fluviatilis_contig10024:3739..3805Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 3740..3805 +
1691135145.9549851-CDS-H-fluviatilis_contig10024:3739..38051691135145.9549851-CDS-H-fluviatilis_contig10024:3739..3805Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 3740..3805 +
1622929000.2809398-CDS-H-fluviatilis_contig10024:4603..48431622929000.2809398-CDS-H-fluviatilis_contig10024:4603..4843Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 4604..4843 +
1691135145.9645238-CDS-H-fluviatilis_contig10024:4603..48431691135145.9645238-CDS-H-fluviatilis_contig10024:4603..4843Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10024 4604..4843 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig10024.107.1

>prot_H-fluviatilis_contig10024.107.1 ID=prot_H-fluviatilis_contig10024.107.1|Name=mRNA_H-fluviatilis_contig10024.107.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=231bp
MSWAALSYTLSVVQNMLVDFPGLPRTASWDCLEHEDPQRNIPMPQEATHI
GDELLSETCPICDPEAGTLGAIAVKLVRMVDVKQSRDDLFNTMQNQFKKL
PAAWRRKYSLKDYPNEEFTTPVNEDAAAQASTPPPTGSLSAAAISPTGQA
QDPSWHEDVKWWFALAGPACLLVFAALAAVAVDMPYLWGAFLVLGCCIMV
ISLWYIWRAKRRRERARTAAQSTAAPTDIV*
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mRNA from alignment at H-fluviatilis_contig10024:1777..5414+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10024.107.1 ID=mRNA_H-fluviatilis_contig10024.107.1|Name=mRNA_H-fluviatilis_contig10024.107.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=3638bp|location=Sequence derived from alignment at H-fluviatilis_contig10024:1777..5414+ (Heribaudiella fluviatilis SAG_13_90)
GGAGCCATTGAGAAGGTCATCACACGTTGCTGCGGCTTCGGCACTCCGTC
GTCGTTCTGGCGCTTCGGTGTTCTAGTACGAGGGGAAGTAGAAGAGGAGA
GCTACGCCTTCGTGCTGGAGTACCTGGATGGAAATCTCGTTCTAGAGGTA
TACGGCGAAGCGGGGAACGCCATGTCGTGGGCGGCGCTCTCCTACACCCT
CTCTGTTGTTCAGAACATGTTGGTGGACTTTCCGGGTCTGCCACGGACGG
CATCCTGGGACTGTCTCGAGCACGAAGACCCTCAGCGAAATATCCCAATG
CCACAGGAGGTGAGGCCCGTGTCAATTTGCGACACTTACGGCAATTCGTG
AAGCAACAGTCTGAGGCTCCGTGTAGAGCACGTCCGGCAACCTTTCATTG
GAGCACTTTTCCAATGACGTTTTCATATCTCGTCGCTTGTGTCTCGATAT
CGCAGCAGGCGACGCATATCGGTGACGAACTTCTCTCGGAAACGTGTCCG
ATTTGTGATCCTGAGGCCGGGACACTTGGTGCAATCGCAGTGAAGCTGGT
GCGAATGGTGGACGTGAAGCAATCGAGAGGTGCGTATGCGGAACACATGC
ACACATGGCTGCCTTGGTGGATCGTGAGGCAAGGGTTAGGGGGGGGAGGT
GGGGTACTTTCAAATCCGTGCTGAATGTGAGTTCTGTTCGCAGCAGGGGT
TAGCTTTCCATTATGTCTTGTGCACGCTCTCCGTCATATCGACCGCAACT
GGATTGCTTCAGAACAGGGTTTCATCTTGCAGTTGTCCATGGCGAGCATT
CAATGACATCGGCTGCCGATAAAGTTCGGGTTGAAATGTCGCACGCCCTT
TGGCCTGGTTTCTGAAGTGCATTGTCCAACGACGCCCGTGTGATTCAGTT
TGATACATCTGGCAGGCTTTGCATGCTTTGGCTCTCATGTGTCCTGTTTG
CCTGCGCGACGCCCATACGCAGATGACCTGTTCAACACAATGCAGAATCA
GTTCAAGAAACTGCCAGCTGCTTGGCGCAGGAAATATTCTTTGAAGGATT
ACCCCAACGAGGAATTCACAACACCGGTCAACGAGGACGCCGCAGCTCAG
GTGATGATGAAGATGGAGTAGCGCGGGCACAGGATCGTTTGCCGATCAGG
TTCCCACTTATCTTTCGCGCAGTCCAGTACCGTGCTGCGTCAGTTCCAAT
GTATCAATGGTGAAGATATACGCGTACATGTTGGGACCTTTGGAGGTGCA
CGTTCGTGCTTTTATTACGTACGTAAGGAAGCGGTAGATGTCGTTGCTGT
TTTGAGAATGCCCAAGTGAATGGATGGTCTGTCTACGTGGAGTGAAGCAC
CTCATGAAATCGCAAGAGATGTCAATTCCCGGTAAGATCTGTGAGCTTGA
GAACTGCAAGTGCTATCGCACACTTTGATGCAGTATGTCTGATATTTTGT
GAACGTACGGAATTTGCTGTCACCTTCGATATCGTCGCAGTATATACTCC
TGTTATATAGCCGTGCGAGCATATACTTGTCAATGGGTAAACTAGTACGC
CACGAGCAGCGGCGAACTTGAGGGATGCGAGGGCGAAAGCAAAGTCCGTA
CAGCGGGGTCGATGGCCACGCAAAAGCTTCGGCCAATTGCTTTTCTTTTT
TTTTATGTGCTCCAGCATGGTACGTGCGATTCGTCGGTGAATTGGCCACC
TGATTTCCTGGTGCGGTGCTGTCGCTTGCTGTATAGGAAAATACCGCACC
GGCAAAGGGGAGTTCTGGATTCCGGCCTCTTTGTGATACGCGTGCACAGG
TGTCCAAGTTGCAGCCAACCTTCCACCCATGTGATTTACCGATAGCACGA
ATGGCAGTGCGACAGAGTGAACCCCACACGTCTATTGGAGCCATGGAATG
TTGGGAGTACATACCAACCGACCGGTTTCCCACTAAATAAATATTCTTTA
CGTGCAATGGCAGGCATCCACGCCACCTCCGACAGGCAGCTTGAGCGCCG
CTGCCATCAGTCCTACTGGCCAAGCACAGGTCAGATTTTTGTTGACTTTG
CAAGACAAGTAACGCCGCCGCACGTAGCGTCCACCTCTTGCTAGACATCT
ACCGGTGTTTATCGCAGGGCTGGTCTTGCATACATCAGCTCCGCGGATAG
TGCTACGCAATTGATCCCCACGTCTTCATTGGATATCACGAGTCGCGGAA
ATTTGATAACGGCCGATCGATGCCCCTCTGTGGTTGGCTTGCATCACGTT
TTGCTGCGATTACAGGCATCCACACCAGCCCCGGATGACAGCGAGAGCGT
GATTCCCCCCAACCCTACACACCGATTGCAGGTTGATGAATCAGGGGAAA
ACGTGTCATTGGTCAATGAACTCTCTGACAACGCCTTGCGCAAATTTCAA
CACGCCTTGGCCCACAGCCCTCCCTGGCTTCGTCGCTCATGCACAGTTGA
ATTTAGATATTGGATTCACGTATGTGAACGTTGTTAGGCTCCTGCAGCTG
TTCCTTCGTTCATGTTCGTGACTTCGGCGCCATTGGTTGACTGTTCTCGC
ATCGTTGTGTTTTACTGCATTTTTGCGCTGGTCCTTCGAGACCCTGCGTC
ACTGAAGGCATGAATCGCATAGCTTGTTACAAAGGCATCATGCATGAGAA
TGATTCCGTACGACTGTTGCATCACCCCCACCAGCGGAATCTAGTGTCGC
GGCAGACTCGTGCATGATGATGGATATTATAACTGTCACGTGCTCGAGTT
CATCCCGCTTCGACGAGAGAGTGCATGCACCGCCGTAATGTCCTAATCCT
CGGCCGATCGACCACGCCGATATGCAGGATCCGTCATGGCACGAGGATGT
CAAGTGGTGGTTCGCTCTCGCTGGTCCCGCGTGCTTACTTGTTTTCGCCG
CGCTGGCCGCAGTGGCAGTCGACATGCCTTATCTGTGGGGGGCATTTCTT
GTTCTCGGCTGCTGCATAATGGTGATTTCGCTGTGGTACATCTGGCGCGC
AAAGCGACGAAGAGAAAGGGCTAGGACAGCGGCACAAAGCACTGCCGCGC
CCACGGATATCGTCTGAAGTAGTCCAGCGTCGAAATGGATGATTGGTAGA
AGCTCACGACACGTCTGCACATTCGAACGCTGGGAGCGGAACCTTCGTCG
GGAGAAGTGTCTCTCCGTACGAAATACAATGTTTCTTGACGGCGAAGCAG
TGTCATTGAATATGCGTAGTGCGCTCGCACTTGACGTCAAGCGCGTGAAC
GACTTTACGGGGATTCGCAGCGTGACGTTAGGGATCAAGGGTTACACGGC
TAACTCAGATGAGTGAGCGTCGAAGTACTGTTACAGAATAGTACGTGATA
GCTTTCGAGTCGTTGCTGATGATGGGGAGACACTTACCTGTTGCACGTGC
TGGGTAGTGCCGGGTAACTTGAAATGTTGTGCTGTTTTCGCTTGTCACTC
ATCGAACATTCATTTTTTACACGGTGTGCGAGCTGGGCATGTCGTGTAGC
ATGCGCAGGCAGGCACATTGGACCGTTCTGTCTGCATGGTGCACGGATAT
TAAGAGGCGCGTGTCTACAGCATTAAAGTGGAGCCGAATGCGCTCAGACT
TCCTACGGGAGAAAAGGCCAGCATGTTCATGCGAGAAG
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Coding sequence (CDS) from alignment at H-fluviatilis_contig10024:1777..5414+

>mRNA_H-fluviatilis_contig10024.107.1 ID=mRNA_H-fluviatilis_contig10024.107.1|Name=mRNA_H-fluviatilis_contig10024.107.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1386bp|location=Sequence derived from alignment at H-fluviatilis_contig10024:1777..5414+ (Heribaudiella fluviatilis SAG_13_90)
ATGTCGTGGGCGGCGCTCTCCTACACCCTCTCTGTTGTTCAGAACATGTT
GGTGGACTTTCCGGGTCTGCCACGGACGGCATCCTGGGACTGTCTCGAGC
ACGAAGACCCTCAGCGAAATATCCCAATGCCACAGGAGATGTCGTGGGCG
GCGCTCTCCTACACCCTCTCTGTTGTTCAGAACATGTTGGTGGACTTTCC
GGGTCTGCCACGGACGGCATCCTGGGACTGTCTCGAGCACGAAGACCCTC
AGCGAAATATCCCAATGCCACAGGAGGCGACGCATATCGGTGACGAACTT
CTCTCGGAAACGTGTCCGATTTGTGATCCTGAGGCCGGGACACTTGGTGC
AATCGCAGTGAAGCTGGTGCGAATGGTGGACGTGAAGCAATCGAGAGGCG
ACGCATATCGGTGACGAACTTCTCTCGGAAACGTGTCCGATTTGTGATCC
TGAGGCCGGGACACTTGGTGCAATCGCAGTGAAGCTGGTGCGAATGGTGG
ACGTGAAGCAATCGAGAGATGACCTGTTCAACACAATGCAGAATCAGTTC
AAGAAACTGCCAGCTGCTTGGCGCAGGAAATATTCTTTGAAGGATTACCC
CAACGAGGAATTCACAACACCGGTCAACGAGGACGCCGCAGCTCAGATGA
CCTGTTCAACACAATGCAGAATCAGTTCAAGAAACTGCCAGCTGCTTGGC
GCAGGAAATATTCTTTGAAGGATTACCCCAACGAGGAATTCACAACACCG
GTCAACGAGGACGCCGCAGCTCAGGCATCCACGCCACCTCCGACAGGCAG
CTTGAGCGCCGCTGCCATCAGTCCTACTGGCCAAGCACAGGCATCCACGC
CACCTCCGACAGGCAGCTTGAGCGCCGCTGCCATCAGTCCTACTGGCCAA
GCACAGGATCCGTCATGGCACGAGGATGTCAAGTGGTGGTTCGCTCTCGC
TGGTCCCGCGTGCTTACTTGTTTTCGCCGCGCTGGCCGCAGTGGCAGTCG
ACATGCCTTATCTGTGGGGGGCATTTCTTGTTCTCGGCTGCTGCATAATG
GTGATTTCGCTGTGGTACATCTGGCGCGCAAAGCGACGAAGAGAAAGGGC
TAGGACAGCGGCACAAAGCACTGCCGCGCCCACGGATATCGTCTGAGATC
CGTCATGGCACGAGGATGTCAAGTGGTGGTTCGCTCTCGCTGGTCCCGCG
TGCTTACTTGTTTTCGCCGCGCTGGCCGCAGTGGCAGTCGACATGCCTTA
TCTGTGGGGGGCATTTCTTGTTCTCGGCTGCTGCATAATGGTGATTTCGC
TGTGGTACATCTGGCGCGCAAAGCGACGAAGAGAAAGGGCTAGGACAGCG
GCACAAAGCACTGCCGCGCCCACGGATATCGTCTGA
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