Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 302 |
| Cds size | 273 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928997.3662531-UTR-H-fluviatilis_contig10012:1706..1735 | 1622928997.3662531-UTR-H-fluviatilis_contig10012:1706..1735 | Heribaudiella fluviatilis SAG_13_90 | UTR | H-fluviatilis_contig10012 1707..1735 + |
| 1691135144.3767867-UTR-H-fluviatilis_contig10012:1706..1735 | 1691135144.3767867-UTR-H-fluviatilis_contig10012:1706..1735 | Heribaudiella fluviatilis SAG_13_90 | UTR | H-fluviatilis_contig10012 1707..1735 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928997.3826048-CDS-H-fluviatilis_contig10012:1735..1832 | 1622928997.3826048-CDS-H-fluviatilis_contig10012:1735..1832 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 1736..1832 + |
| 1691135144.392486-CDS-H-fluviatilis_contig10012:1735..1832 | 1691135144.392486-CDS-H-fluviatilis_contig10012:1735..1832 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 1736..1832 + |
| 1622928997.396146-CDS-H-fluviatilis_contig10012:2369..2545 | 1622928997.396146-CDS-H-fluviatilis_contig10012:2369..2545 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 2370..2545 + |
| 1691135144.402466-CDS-H-fluviatilis_contig10012:2369..2545 | 1691135144.402466-CDS-H-fluviatilis_contig10012:2369..2545 | Heribaudiella fluviatilis SAG_13_90 | CDS | H-fluviatilis_contig10012 2370..2545 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10012.82.1 >prot_H-fluviatilis_contig10012.82.1 ID=prot_H-fluviatilis_contig10012.82.1|Name=mRNA_H-fluviatilis_contig10012.82.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=91bp
MSALQLSVGAQQTNVLQHRKCGALNAAVSDLKGKTQSTVMDRALLVKATG
KTACLACAGCDKTAKQSVRSVGQSFRAPDRAWARISCSSTK back to topmRNA from alignment at H-fluviatilis_contig10012:1707..2545+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-fluviatilis_contig10012.82.1 ID=mRNA_H-fluviatilis_contig10012.82.1|Name=mRNA_H-fluviatilis_contig10012.82.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=839bp|location=Sequence derived from alignment at H-fluviatilis_contig10012:1707..2545+ (Heribaudiella fluviatilis SAG_13_90)
CCACCGTGCTGGCGAGGAGAGAATGGCGGATGTCAGCGCTACAGTTGAGC
GTGGGAGCTCAGCAAACAAATGTGCTCCAGCACAGGAAGTGCGGGGCGCT
TAACGCAGCAGTATCCGACTTGAAGGGTGAGATGTTGAAACGTCGGCTTC
GGAAGTAGTCAGAATACAAGACTTGCGGCCACGAAGCACAAGACAGTGCA
ATACAGTAGAGTACAGTAACGTACGATGGCTACTGCAAACACACAGCACA
TGCAGTAAAGACGAGGCTGTGCATCGTAGCAAATTATGCATTTCCTGTGG
GGTGACGGTGTTTGTCTGTCTGTGTGATTGTTTCCATCGGAAAGTGCAGA
GCCCTGGCTCAAGTGTAAACAGCTGTCGATGTGGGCCAATTGTTCGACAA
GAAAGCGTCGCCAATCGTGCAGTTTTAATGGTTCTGAAAGGCCTTCAGTG
CTTGACCGATGAGACAAGCTTGGATGACAGGTTATGAGTTTGTATAAGCT
TGTCGGTGTGTAGTCTGGAGGCCAAAGTTGCGGTGTAAATATCAAATCCA
GCAAGAGTACCGGGAGTTGAATTTTTTGGAGTTGTTTACCCGCGGATGAC
CTAACCCGCTAGCAAACGAAGCGGAACACACCACCCACTCGTGTCCTCCG
TGTGCCGTGCCAGGCAAAACACAATCGACCGTGATGGATCGAGCGCTTCT
TGTTAAGGCAACAGGCAAGACCGCCTGTCTCGCCTGTGCAGGATGCGACA
AGACGGCAAAGCAGAGTGTAAGATCTGTGGGACAGTCCTTCAGAGCACCG
GACAGGGCTTGGGCGAGAATCAGCTGCAGCAGCACGAAG back to topCoding sequence (CDS) from alignment at H-fluviatilis_contig10012:1707..2545+ >mRNA_H-fluviatilis_contig10012.82.1 ID=mRNA_H-fluviatilis_contig10012.82.1|Name=mRNA_H-fluviatilis_contig10012.82.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=546bp|location=Sequence derived from alignment at H-fluviatilis_contig10012:1707..2545+ (Heribaudiella fluviatilis SAG_13_90)
ATGTCAGCGCTACAGTTGAGCGTGGGAGCTCAGCAAACAAATGTGCTCCA
GCACAGGAAGTGCGGGGCGCTTAACGCAGCAGTATCCGACTTGAAGGATG
TCAGCGCTACAGTTGAGCGTGGGAGCTCAGCAAACAAATGTGCTCCAGCA
CAGGAAGTGCGGGGCGCTTAACGCAGCAGTATCCGACTTGAAGGGCAAAA
CACAATCGACCGTGATGGATCGAGCGCTTCTTGTTAAGGCAACAGGCAAG
ACCGCCTGTCTCGCCTGTGCAGGATGCGACAAGACGGCAAAGCAGAGTGT
AAGATCTGTGGGACAGTCCTTCAGAGCACCGGACAGGGCTTGGGCGAGAA
TCAGCTGCAGCAGCACGAAGGCAAAACACAATCGACCGTGATGGATCGAG
CGCTTCTTGTTAAGGCAACAGGCAAGACCGCCTGTCTCGCCTGTGCAGGA
TGCGACAAGACGGCAAAGCAGAGTGTAAGATCTGTGGGACAGTCCTTCAG
AGCACCGGACAGGGCTTGGGCGAGAATCAGCTGCAGCAGCACGAAG back to top
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