mRNA_H-fluviatilis_contig100017.64.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A0G4J026_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J026_PLABS) HSP 1 Score: 58.5 bits (140), Expect = 1.250e-8 Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1 Query: 22 TGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTF 135 TGK +MM+ H+SRDTAEKQWDETR ALQG AR R F Sbjct: 933 TGKPLMMVTHHSRDTAEKQWDETRVHALQGSARVFRQF 970
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A7S0DC24_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DC24_9EUKA) HSP 1 Score: 55.5 bits (132), Expect = 1.520e-7 Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 1 Query: 22 TGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTFVKV 144 TG+ V+MMVHYSRDTA KQWDETR AL+ A L F+ V Sbjct: 282 TGQKVLMMVHYSRDTARKQWDETRVLALRAAAAVLGEFMSV 322
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A1Y1IF23_KLENI (ARM repeat superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IF23_KLENI) HSP 1 Score: 55.1 bits (131), Expect = 2.090e-7 Identity = 23/46 (50.00%), Postives = 35/46 (76.09%), Query Frame = 1 Query: 25 GKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTFVKVKQGQVD 162 GKTV+M+VH+SR+TA+KQWDET L G++R LR++ ++ + D Sbjct: 1190 GKTVLMLVHHSRNTAQKQWDETLVMYLSGMSRLLRSYFRLLEAMPD 1235
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: UPI0009E4193A (protein MON2 homolog isoform X1 n=12 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E4193A) HSP 1 Score: 53.9 bits (128), Expect = 5.350e-7 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 16 TDTGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTF 135 T GKTV M++H+SRDTA+KQWDET L G+ R LR+F Sbjct: 1067 TRRGKTVHMLIHHSRDTAQKQWDETLVLVLGGITRLLRSF 1106
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A7I8JAC3_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JAC3_SPIIN) HSP 1 Score: 53.5 bits (127), Expect = 7.320e-7 Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 16 TDTGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTFVKVKQG 153 T GK V+M++H+SR+TA+KQWDET L G+ R LR+F QG Sbjct: 1027 TRGGKAVLMLIHHSRNTAQKQWDETLVLVLGGITRLLRSFFPFLQG 1072
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A484L7E8_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484L7E8_9ASTE) HSP 1 Score: 53.1 bits (126), Expect = 9.990e-7 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 16 TDTGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTF 135 T GK V M++H+SR+TA+KQWDET L G+AR LRTF Sbjct: 652 TRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARVLRTF 691
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A328DWI7_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328DWI7_9ASTE) HSP 1 Score: 53.1 bits (126), Expect = 9.990e-7 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 16 TDTGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTF 135 T GK V M++H+SR+TA+KQWDET L G+AR LRTF Sbjct: 642 TRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARVLRTF 681
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A328E337_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328E337_9ASTE) HSP 1 Score: 53.1 bits (126), Expect = 1.000e-6 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 16 TDTGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTF 135 T GK V M++H+SR+TA+KQWDET L G+AR LRTF Sbjct: 1131 TRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARVLRTF 1170
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A2Z7CEM4_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CEM4_9LAMI) HSP 1 Score: 53.1 bits (126), Expect = 1.000e-6 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 16 TDTGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTF 135 T GK V M++H+SR+TA+KQWDET L G+AR LRTF Sbjct: 1217 TRKGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARILRTF 1256
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Match: A0A388KWM5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KWM5_CHABU) HSP 1 Score: 53.1 bits (126), Expect = 1.000e-6 Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 25 GKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTFVKV 144 GK V M+VH+SR+TA+KQWDET AL G++R LR+F+ + Sbjct: 1135 GKPVHMLVHHSRNTAQKQWDETLVVALYGMSRLLRSFLPI 1174 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig100017.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig100017.64.1 >prot_H-fluviatilis_contig100017.64.1 ID=prot_H-fluviatilis_contig100017.64.1|Name=mRNA_H-fluviatilis_contig100017.64.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=54bp MGGGVTDTGKTVMMMVHYSRDTAEKQWDETRATALQGLARGLRTFVKVKQback to top mRNA from alignment at H-fluviatilis_contig100017:226..387+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig100017.64.1 ID=mRNA_H-fluviatilis_contig100017.64.1|Name=mRNA_H-fluviatilis_contig100017.64.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=162bp|location=Sequence derived from alignment at H-fluviatilis_contig100017:226..387+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig100017:226..387+ >mRNA_H-fluviatilis_contig100017.64.1 ID=mRNA_H-fluviatilis_contig100017.64.1|Name=mRNA_H-fluviatilis_contig100017.64.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=324bp|location=Sequence derived from alignment at H-fluviatilis_contig100017:226..387+ (Heribaudiella fluviatilis SAG_13_90)back to top |