prot_H-canaliculatus_M_contigs9995.4.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9995.4.1
Unique Nameprot_H-canaliculatus_M_contigs9995.4.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length114
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9995.4.1 vs. uniprot
Match: A0A6H5JIT9_9PHAE (Urb2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIT9_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 2.790e-49
Identity = 97/110 (88.18%), Postives = 102/110 (92.73%), Query Frame = 0
Query:    6 ALSVEEQVAAASVFSRVLEQFVPHKEVLKKYAAFLLLEYVSLAGLVALEPAPRAALLSGVFAVMQACSAREMRQLHRLL--GALPTGTGQEVFRSLNEEYQRQHKYVGKM 113
            A+S+EEQVAAASVFSRVLEQFVPHKEVLKKYAAFLLLEYVSLAG  ALEPAPRAALLSGVFAVMQACS REMRQLH LL   +LPTGTGQ+VFR+LNEEYQ QHKYVGKM
Sbjct: 2336 AVSMEEQVAAASVFSRVLEQFVPHKEVLKKYAAFLLLEYVSLAGAAALEPAPRAALLSGVFAVMQACSRREMRQLHGLLLGPSLPTGTGQQVFRALNEEYQLQHKYVGKM 2445          
BLAST of mRNA_H-canaliculatus_M_contigs9995.4.1 vs. uniprot
Match: UPI00138FB063 (uncharacterized protein LOC5518481 isoform X1 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FB063)

HSP 1 Score: 57.8 bits (138), Expect = 2.390e-7
Identity = 32/101 (31.68%), Postives = 52/101 (51.49%), Query Frame = 0
Query:   13 VAAASVFSRVLEQFVPHKEVLKKYAAFLLLEYVSLAGLVALEPAPRAALLSGVFAVMQACSAREMRQLHRLLGALPTGTGQEVFRSLNEEYQRQHKYVGKM 113
            +  A   +R+ ++   HK    KY+ +L+ EY+ +A  V L    +  L  GVF ++  C   E   LH  L        +E+F++LNEEY + HK+ GK+
Sbjct:  846 MTCAQKIARLYQEIATHKTAFSKYSPYLIAEYIHVAQGVHLPSHVKEVLTDGVFCLLDLCGDHETALLHATLSK----GSRELFKTLNEEYNKYHKFTGKV 942          
BLAST of mRNA_H-canaliculatus_M_contigs9995.4.1 vs. uniprot
Match: A0A1Y1I1W6_KLENI (Urb2 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1W6_KLENI)

HSP 1 Score: 56.6 bits (135), Expect = 6.310e-7
Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 0
Query:    6 ALSVEEQVAAASVFSRVLEQFVPHKEVLKKYAAFLLLEYVS-LAGLVALEPA----PRAALLSGVFAVMQACSAREMRQLHRLLGALPTGTGQEVFRSLNEEYQRQHKYVGKM 113
            A+  E    A +   RV E+   HK  L  Y   +L +Y++ L GL A + A        L SG+FA+  +CS  +++QLH  LGA    T +    +L ++Y+++HKY GK+
Sbjct: 2194 AVRQEAAGTACAALRRVYEEVGNHKASLSHYCVHMLADYLAALCGLTASKDAISRDAATTLRSGIFALFDSCSPYDLQQLHASLGA--DATRRNALAALRQDYEKRHKYTGKV 2304          
BLAST of mRNA_H-canaliculatus_M_contigs9995.4.1 vs. uniprot
Match: A0A7S4HYH2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HYH2_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.870e-6
Identity = 32/96 (33.33%), Postives = 57/96 (59.38%), Query Frame = 0
Query:   19 FSRVLEQFVPHKEVLKKYAAFLLLEYVSLAGLVA--LEPAPRAALLSGVFAVMQACSAREMRQLHRLLGALPTGTGQEVFRSLNEEYQRQHKYVGK 112
            F+++ E    HK+V KK+A  L+L+YV  A   +  L P  +  L+  V+A++  CS  EM+ L+ ++    +  G+ VFRS+ + Y++ H+Y G+
Sbjct:  853 FAKLCEMLSAHKDVFKKHAVILILDYVDTAAGESSLLSPGAKKDLIPAVYALLDMCSVFEMQHLNIMM----SDAGRTVFRSVFDSYKKVHQYKGQ 944          
BLAST of mRNA_H-canaliculatus_M_contigs9995.4.1 vs. uniprot
Match: A0A1U8ALJ9_NELNU (uncharacterized protein LOC104605241 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8ALJ9_NELNU)

HSP 1 Score: 50.4 bits (119), Expect = 9.070e-5
Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 0
Query:    3 GRLALSVEEQVAAASVFSRVLEQFVPHKEVLKKYAAFLLLEYVSL-AGLVALEPAPRA----ALLSGVFAVMQACSAREMRQLHRLLGALPTGTGQEVFRSLNEEYQRQHKYVGKM 113
            G  A  VEE V  AS   R+ E+    K+VL +Y+   L  Y+ + +G    +   R     AL  GV+A++ ACSA +++QLH +LG  P    +    +L  +Y+   +Y GK+
Sbjct: 2019 GYFAWEVEEGVKCASFLRRIYEEIRQQKDVLGRYSFLFLSNYIWIYSGYGPFKTGIRREIDEALRPGVYALIDACSADDLQQLHTVLGEGPC---RSTLATLQHDYKLNFQYEGKV 2131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9995.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JIT9_9PHAE2.790e-4988.18Urb2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI00138FB0632.390e-731.68uncharacterized protein LOC5518481 isoform X1 n=2 ... [more]
A0A1Y1I1W6_KLENI6.310e-733.63Urb2 domain-containing protein n=1 Tax=Klebsormidi... [more]
A0A7S4HYH2_9STRA2.870e-633.33Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1U8ALJ9_NELNU9.070e-532.76uncharacterized protein LOC104605241 n=1 Tax=Nelum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018849Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminalPFAMPF10441Urb2coord: 9..112
e-value: 1.2E-16
score: 61.3
NoneNo IPR availablePANTHERPTHR15682UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOGcoord: 6..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9995contigH-canaliculatus_M_contigs9995:4241..4582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9995.4.1mRNA_H-canaliculatus_M_contigs9995.4.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9995 4241..4582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9995.4.1 ID=prot_H-canaliculatus_M_contigs9995.4.1|Name=mRNA_H-canaliculatus_M_contigs9995.4.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=114bp
GPGRLALSVEEQVAAASVFSRVLEQFVPHKEVLKKYAAFLLLEYVSLAGL
VALEPAPRAALLSGVFAVMQACSAREMRQLHRLLGALPTGTGQEVFRSLN
EEYQRQHKYVGKM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018849Urb2/Npa2_C