mRNA_H-canaliculatus_M_contigs999.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C6_9PHAE) HSP 1 Score: 288 bits (737), Expect = 1.070e-90 Identity = 176/291 (60.48%), Postives = 204/291 (70.10%), Query Frame = 1
Query: 1 LPVQLQVSSVLLRLSWRDSHTTKTAGATRAARFLASMPSGGRC-RRDSSAAPLF-YLPHHP-LASRAFGARSSDSATSTGDGDRIGSDAIVGAAQ---ETTKDPWGNHGKLIYEGSIAHQVRRLKRVSITTCFISFLAVPALVAFGKDSVPMAGQIAVMGTALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGT-EDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILGMRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTLLGRELKEHET*P 852
+ +++ S VLL +S+ + A A +A LAS +G + R +S APL +L P L +RA S S S D D+ ++A Q ET KD WGN GKLIYEGS+AH VR LKRVSITTC IS LAVPALV +GK+SVP+AGQ+AVM AL GTG STLLLNLCVSPYVFRMAEI G EDG+ V KK +N NRYGM K SGRRFR ERMNI G+R+TTEFS+DEVEPMP TSRPFVSFKA +YYFIQGHDMADK LLQTLLGRELK+HE P
Sbjct: 1 MATRIKASPVLLHVSFLSR---RAAAAPSSAPSLASSLAGLQYWRGNSKMAPLLCHLSRFPPLLTRA-----SFSTKSAKDDDKTATEAKAKVEQVSAETRKDQWGNRGKLIYEGSLAHPVRGLKRVSITTCLISILAVPALVMYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDGE-VRKKPRNKTNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRP 282
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID1_ECTSI) HSP 1 Score: 213 bits (541), Expect = 2.230e-63 Identity = 111/144 (77.08%), Postives = 121/144 (84.03%), Query Frame = 1
Query: 415 FGKDSVPMAGQIAVMGTALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGT-EDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILGMRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTLLGRELKEHE 843
+GK+SVP+AGQ+AVM AL GTG STLLLNLCVSPYVFRMAEI G EDGD V KK +N KNRYGM K SGRRFR ERMNI G+R+TTEFS+DEVEPMP TSRPFVSFKA +YYFIQGHDMADK LLQTLLGRELK+HE
Sbjct: 2 YGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDGD-VRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHE 144
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD4_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.820e-37 Identity = 81/178 (45.51%), Postives = 106/178 (59.55%), Query Frame = 1
Query: 310 KLIYEGSIAHQVRRLKRVSITTCFISFLAVPALVAFGKDSVPMAGQIAVMGTALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGTEDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILGMRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTLLGRELKEHE 843
+L+Y G + ++ LKRVSITTC +S + P L+ G DSVP++GQIAV G AL GST LL+ C PYV +++EI G +DK R F+AE ++ILG + TEF L +V+P P RPFVSFKA D YYFIQG + DK+LL+ LLGR L + E
Sbjct: 48 ELLYIGPLTAPIKTLKRVSITTCAMSMIGTPLLLVLGNDSVPLSGQIAVTGVALTAAVGSTALLHWCTRPYVHKLSEITGRGA-------IDK---------------ARLFKAELLSILGRPRVTEFRLGDVQPQPDALRPFVSFKARDNYYFIQGEVLQDKALLKELLGRPLDDSE 203
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZQ4_PYTIN) HSP 1 Score: 84.7 bits (208), Expect = 5.210e-15 Identity = 53/199 (26.63%), Postives = 91/199 (45.73%), Query Frame = 1
Query: 265 GAAQETTKDPWGNHGKLIYEGSIAHQVRRLKRVSITTCFISFLAVPALVAFGKDSVPMAGQIAVMGTALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGTEDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILGMRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTLLGRELKEHET*PDSD 861
G + +T +L+Y+ +A VR +K VS+T+C ++ + +PAL + S + G+ A+ GT + G+T L ++ PYV RM +D+ S R AE + + TT+F+L +V P + P +SF+AG+ YFI + D L++ +G + K H D +
Sbjct: 48 GLSSSSTSTXXATXPELVYQAPMARAVRLMKGVSVTSCALTLVGMPALCVLSEQSASIIGKWAMCGTIMLFGLGTTSLYHVLFKPYVMRMW--------------IDR--------------SENRVTAETVTLFARLTTTDFALGDVTRPPKSMHPMISFRAGEXDYFIHPECLQDDDLVKVFMGEDFKVHRATVDKE 218
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PEX5_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 5.240e-13 Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 1
Query: 319 YEGSIAHQVRRLKRVSITTCFISFLAVPALVAFGKDS-VPMAGQIAVMGTALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGTEDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILGMRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTLLGRELKEH 840
YEG + RLKRVS+TTCF+ +PA + S VPM GQ+AV GTA GSTLLL+ C +PYV ++ + E G VD ++K++ + RA +L T F + ++ RPF +F A + ++++ LL+ + + + H
Sbjct: 4 YEGPFSSLALRLKRVSLTTCFVGTFGLPAALFVKHGSAVPMGGQLAVAGTAAVAAVGSTLLLSYCFNPYVHKLEYV-----DPETGTPVDTIAISEKDKTALH------IRATTRTLLSTELQTVFDPVNDVTVASSVRPFCNFVAAGVPMYCHPEILSEQRLLKVISAKSNRSH 167
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Predicted (protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SMY7_NEMVE) HSP 1 Score: 64.7 bits (156), Expect = 7.610e-9 Identity = 48/168 (28.57%), Postives = 79/168 (47.02%), Query Frame = 1
Query: 316 IYEGSIAHQVRRLKRVSITTCFISFLAVPALVAFGKDSVPMAGQIAVMGT-ALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGTEDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILGMRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTL 816
+YEG ++ VR +K S+TT F S + P LV FGK SVP+AG++A+ G L GT +T+LL+ YV +M PS + F + ++ G + +EF++++V P+ F +F+A +FI + + +L L
Sbjct: 1 VYEGPLSKSVRYVKTFSLTTAFASIVGSPILVYFGKQSVPLAGKLAIAGLLCLVGTS-TTILLHWFTKGYVHKM----------------------------YFDPSKQMFSVDTLSFFGRPQRSEFTVNDVV-FPSEESAFKTFEANGKPFFIHQEMVEAQQVLHYL 138
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KK78_SPIIN) HSP 1 Score: 61.6 bits (148), Expect = 5.860e-7 Identity = 47/170 (27.65%), Postives = 79/170 (46.47%), Query Frame = 1
Query: 313 LIYEGSIAHQVRRLKRVSITTCFISFLAVPALVAFGKDSVPMAGQIAVMGTALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGTEDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILG--MRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTL 816
L+Y G I+ ++++K +S++TC +S P + + + + AV T + + +T L+ VSPYV ++ R+ +P F E ++ L + +T F+ +V P P T RPFV+FKAG +YF+ G DK+LL L
Sbjct: 100 LVYRGPISSTIKKVKLLSLSTCCLSVSLGPVITFMTSPEMNVILKGAVASTVIFLSASTTAALHWFVSPYVHKL-------------------------RW---RPGADSFDVEMLSWLATPLPRTVRFA--DVRP-PQTQRPFVTFKAGGDFYFVDGEHFRDKALLARL 238
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427BB02_ENSVE) HSP 1 Score: 62.0 bits (149), Expect = 8.250e-7 Identity = 47/181 (25.97%), Postives = 80/181 (44.20%), Query Frame = 1
Query: 274 QETTKDPWGNHGKLIYEGSIAHQVRRLKRVSITTCFISFLAVPALVAFGKDSVPMAGQIAVMGTALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGTEDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILGMRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTL 816
+ET KD G IY+G I+ ++++K +S++TC +S P + + + + AV T + + +T L+ VSPY+ ++ R+ +P F E M+ L ++ P P T+RPFV+FKAG +YF+ +K+LL L
Sbjct: 159 EETKKD--GKETGFIYQGPISSTIKKVKLLSLSTCCLSVSLGPVITFMTSPGMNVILKGAVASTVILLSASTTAALHWFVSPYIHKL-------------------------RW---QPGSDNFEVEMMSWLATPVPRTIKFADIRP-PETNRPFVTFKAGGNFYFVDVEHCHNKALLARL 308
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IXB6_SPIIN) HSP 1 Score: 56.2 bits (134), Expect = 3.360e-5 Identity = 45/166 (27.11%), Postives = 76/166 (45.78%), Query Frame = 1
Query: 325 GSIAHQVRRLKRVSITTCFISFLAVPALVAFGKDSVPMAGQIAVMGTALAGTGGSTLLLNLCVSPYVFRMAEILNHGEGTEDGDGVDKKRKNDKNRYGMRKPSGRRFRAERMNILG--MRKTTEFSLDEVEPMPTTSRPFVSFKAGDAYYFIQGHDMADKSLLQTL 816
G I+ ++++K +S++TC +S P + + + + AV T + + +T L+ VSPYV ++ R+ +P F E ++ L + +T F+ +V P P T RPFV+FKAG +YF+ G DK+LL L
Sbjct: 95 GPISSTIKKVKLLSLSTCCLSVSLGPVITFMTSPEMNVILKGAVASTVIFLSASTTAALHWFVSPYVHKL-------------------------RW---RPGADSFDVEMLSWLATPLPRTVRFA--DVRP-PQTQRPFVTFKAGGDFYFVDGEHFRDKALLARL 229 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs999.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs999.1.1 >prot_H-canaliculatus_M_contigs999.1.1 ID=prot_H-canaliculatus_M_contigs999.1.1|Name=mRNA_H-canaliculatus_M_contigs999.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=247bp MPSGGRCRRDSSAAPLFYLPHHPLASRAFGARSSDSATSTGDGDRIGSDAback to top mRNA from alignment at H-canaliculatus_M_contigs999:1511..4174+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs999.1.1 ID=mRNA_H-canaliculatus_M_contigs999.1.1|Name=mRNA_H-canaliculatus_M_contigs999.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2664bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs999:1511..4174+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs999:1511..4174+ >mRNA_H-canaliculatus_M_contigs999.1.1 ID=mRNA_H-canaliculatus_M_contigs999.1.1|Name=mRNA_H-canaliculatus_M_contigs999.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=741bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs999:1511..4174+ (Hapterophycus canaliculatus Oshoro7m male)back to top |