prot_H-canaliculatus_M_contigs998.3.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs998.3.1
Unique Nameprot_H-canaliculatus_M_contigs998.3.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length62
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs998.3.1 vs. uniprot
Match: A0A6H5JC24_9PHAE (VPS13 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC24_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 2.720e-24
Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = 0 
Query:    4 QMDDVKMDFRAEQYEQALSLKDSLSALSNWQTFFPFRPKTTPLQDPKAWWR 54
            +MDDVKMDFRAEQYEQALSLKDS +AL+NWQ FFP+RPKTTP QDP+AWWR
Sbjct:  160 EMDDVKMDFRAEQYEQALSLKDSAAALANWQMFFPYRPKTTPKQDPRAWWR 210
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BLAST of mRNA_H-canaliculatus_M_contigs998.3.1 vs. uniprot
Match: A0A6H5K5U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U0_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.130e-23
Identity = 43/51 (84.31%), Postives = 50/51 (98.04%), Query Frame = 0 
Query:    4 QMDDVKMDFRAEQYEQALSLKDSLSALSNWQTFFPFRPKTTPLQDPKAWWR 54
            +MDDVKMDFRAEQYEQALSLKDS++AL+NWQTFFP+RPKTTP +DP+AWWR
Sbjct:  269 EMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPKTTPKRDPRAWWR 319
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BLAST of mRNA_H-canaliculatus_M_contigs998.3.1 vs. uniprot
Match: D8LPW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW3_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 7.710e-23
Identity = 43/57 (75.44%), Postives = 50/57 (87.72%), Query Frame = 0 
Query:    4 QMDDVKMDFRAEQYEQALSLKDSLSALSNWQTFFPFRPKTTPLQDPKAWWRLVQYSV 60
            +MDDVKMDFRAEQYEQALSLKDS++AL+NWQTFFP+RPK TP +DP+AWWR     V
Sbjct:  265 EMDDVKMDFRAEQYEQALSLKDSIAALANWQTFFPYRPKATPKRDPRAWWRYAFLCV 321
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BLAST of mRNA_H-canaliculatus_M_contigs998.3.1 vs. uniprot
Match: A0A836C8S3_9STRA (Peroxin/Ferlin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.180e-7
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0 
Query:   18 EQALSLKDSLSALSNWQTFFPFRPKTTPLQDPKAWWRLVQYSVA 61
            +QA  L+DS +A+ NW  F+P+RP+ +  +DPKAWWR     VA
Sbjct:  353 QQAFLLRDSAAAMRNWAVFYPYRPRVSIREDPKAWWRYAYTCVA 396
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs998.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JC24_9PHAE2.720e-2484.31VPS13 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K5U0_9PHAE2.130e-2384.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPW3_ECTSI7.710e-2375.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8S3_9STRA2.180e-747.73Peroxin/Ferlin domain-containing protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031646Vacuolar protein sorting-associated protein 13, second N-terminal domainPFAMPF16908VPS13coord: 4..55
e-value: 5.7E-10
score: 39.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs998contigH-canaliculatus_M_contigs998:8937..9122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs998.3.1mRNA_H-canaliculatus_M_contigs998.3.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs998 8937..9122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs998.3.1 ID=prot_H-canaliculatus_M_contigs998.3.1|Name=mRNA_H-canaliculatus_M_contigs998.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=62bp
MWCQMDDVKMDFRAEQYEQALSLKDSLSALSNWQTFFPFRPKTTPLQDPK
AWWRLVQYSVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031646VPS13_N2