prot_H-canaliculatus_M_contigs9974.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_M_contigs9974.1.1
Unique Name	prot_H-canaliculatus_M_contigs9974.1.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length	671

Homology

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BLAST of mRNA_H-canaliculatus_M_contigs9974.1.1 vs. uniprot
Match: D7FRN3_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN3_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 3.700e-112
Identity = 273/655 (41.68%), Postives = 334/655 (50.99%), Query Frame = 0

Query:   68 VRLPNTATFGELLESARKQRYGALDFEGPVYGRDGELDTTLREAWVRNDCKVDGTLHIGLAVVVSFKPDSRAPLSFIMGPGDTIGG---RVSTEQGYALSTLRLKIRGGAQLLEDDVTLEKCCVSGMPVGGISSAGWGELHLEVHVKEFVD-NNFRVKLGGISGSGSLDKLVRGVGSN-PSFPCSDSKSP----HNIPSLDAKVTTCSVGSNPEGHQKSRTGSLTVESTSSSSGLVDDRPSAGNRDDACATVLFVLSPSGTVLTLAMPPAATVLDTKEQVAGFEGISPCRQRILWRGVPMEPDNALLYKVGVRGGDTLIVGYRVS-SVSTGTMAPVIELEGTC--DDVLLAEEEKDSRTHSCSG----GAEHVRNTSNGIAVGQGGDVFAEVTGGGGSNTMSVSEYEEDGD---------------GGTMADRSAGAGA---LNGGIDLVEDVRRKGEEGEE----TAEEGTVSPPLXXXXXXRCTAGQGQRKLSGRRAWWS-RSKTRIRRGWRDDSSEHGFG----NGERRGALGGVLLSYLPSSASXXXXXXXXXXXXXXXXRAARVSPAPLRPIHTDPANG-------IVGGIRSSSTAEIYAPPNVTVR---EPPLTPSGGRRNLSGWVPWRYGCRLPASPVSTDDGHGGR 669
            VRLPNTATFGELL  AR++R+GAL+ EGPVYGRDGELDTTLR+ WVRN CKVDGTLHIGLAVVVSF   S+  LS  MGPG TIG    R+  + G   S   L I GGAQ L  +VTL++CCV G+PVGG S  GWGEL LE+HV E    N+ +V +   S   S  +    VG   PS      +SP    H  PS     T   V  N EG   +   SL     S+    V+ RP+  +     +TV+F LSPSG  LTL M P ATVLD K QVA FEG+SPCRQR+LWRG+ MEPD ALL ++G RGGDTLIVGYRV        M PV+ELEG    DD     +   S THS S     GA+     S+G +   GG    E    G  +  +V++ +E+ D                G   D  AGA      NGG+D+V+  +R    GE      A   T SPP          A  G  K  G+RAWW+ R  TR  +G R  S+E G+G        R  +G   LS    SA                 R  RVSP P  P+H +  +G       I+ GI +   + +Y  P        +    PS GR  L  W  W+YG R+P  PV      GGR
Sbjct:    2 VRLPNTATFGELLARAREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCVWGVPVGGFSPKGWGELRLELHVAECTTRNSLQVAMRDSSQGWSASEFRGAVGVGLPSRGTDVLRSPSQPSHLTPSPPVAATY--VPQNNEGSSLTTPSSLHRNGAST----VETRPTVEHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGARGGDTLIVGYRVGPGAPPEVMRPVVELEGNAAGDDDAQNADAAISPTHSPSHHRPCGAQRGTVDSSGSSNIDGG--IPEQGTSGVESAAAVADGDENNDVVAPXXXXXXXXXXXSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASGATSSPPSE--------ARSGSEKSGGQRAWWAKRMATRSLKGSRS-SNEQGWGATGATAALRXXVGASSLSASTPSADSTNNSADT--------RRVRVSPTPAVPVHQNATHGVDRAGVRILRGIGAGGASSMYDSPXXXXXXXXQQRFIPSVGRPKLKVWARWKYGRRVPTPPVPHAGDGGGR 631

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs9974.1.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_M_contigs9974.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FRN3_ECTSI	3.700e-112	41.68	Ubiquitin-like domain-containing protein n=2 Tax=E...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 298..384 e-value: 1.9E-7 score: 32.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 482..496
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..592
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 622..641
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..529
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 312..378 e-value: 1.5E-6 score: 27.8
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 309..378 score: 10.876022
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 310..382

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs9974	contig	H-canaliculatus_M_contigs9974:263..3044 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs9974.1.1	mRNA_H-canaliculatus_M_contigs9974.1.1	Hapterophycus canaliculatus Oshoro7m male	mRNA	H-canaliculatus_M_contigs9974 263..3044 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_M_contigs9974.1.1 ID=prot_H-canaliculatus_M_contigs9974.1.1|Name=mRNA_H-canaliculatus_M_contigs9974.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=671bp
QAVNLAHTLGEYHDQHSGPCSSTTVFGTGTRLRRVISLKVKHIPFPQQLV
TCTVEGGEGRKSLRRATVRLPNTATFGELLESARKQRYGALDFEGPVYGR
DGELDTTLREAWVRNDCKVDGTLHIGLAVVVSFKPDSRAPLSFIMGPGDT
IGGRVSTEQGYALSTLRLKIRGGAQLLEDDVTLEKCCVSGMPVGGISSAG
WGELHLEVHVKEFVDNNFRVKLGGISGSGSLDKLVRGVGSNPSFPCSDSK
SPHNIPSLDAKVTTCSVGSNPEGHQKSRTGSLTVESTSSSSGLVDDRPSA
GNRDDACATVLFVLSPSGTVLTLAMPPAATVLDTKEQVAGFEGISPCRQR
ILWRGVPMEPDNALLYKVGVRGGDTLIVGYRVSSVSTGTMAPVIELEGTC
DDVLLAEEEKDSRTHSCSGGAEHVRNTSNGIAVGQGGDVFAEVTGGGGSN
TMSVSEYEEDGDGGTMADRSAGAGALNGGIDLVEDVRRKGEEGEETAEEG
TVSPPLLPPPPPRCTAGQGQRKLSGRRAWWSRSKTRIRRGWRDDSSEHGF
GNGERRGALGGVLLSYLPSSASSSESTRSSNSNNSSNTRAARVSPAPLRP
IHTDPANGIVGGIRSSSTAEIYAPPNVTVREPPLTPSGGRRNLSGWVPWR
YGCRLPASPVSTDDGHGGRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029071	Ubiquitin-like_domsf
IPR000626	Ubiquitin_dom