prot_H-canaliculatus_M_contigs9905.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_M_contigs9905.1.1
Unique Name	prot_H-canaliculatus_M_contigs9905.1.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length	268

Homology

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: D7FQ11_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ11_ECTSI)

HSP 1 Score: 454 bits (1168), Expect = 1.380e-150
Identity = 223/256 (87.11%), Postives = 235/256 (91.80%), Query Frame = 0

Query:   10 GAFVPPSADRLCPILSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFEFLERRKPPGLMRCKVSGDLEARASAEHPPGTPLWSVFNCGYRREQDAVWAAECF 265
            G FVPPSA RLCPI SGP KG V+LG+DCEMIYTS GLELARATLVNVKGQ VYD+LVKPTL VTDYNTQFSGIT EML+GV+R+LRDAQREILSFV  ETYLVGHSLDSDL+AL+LVHRRLIDTSELYP+ RG PFKNGLRVLSKTVLGRAIQGGD+GHDS EDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFE LERR+P   +RCKVSGDLEAR SAEHPPGTPLWSVFNCGYRREQDAVWAA  F
Sbjct:  526 GEFVPPSAGRLCPIPSGPHKGTVMLGLDCEMIYTSEGLELARATLVNVKGQTVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNLRGIPFKNGLRVLSKTVLGRAIQGGDAGHDSGEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFESLERREPTRPLRCKVSGDLEARGSAEHPPGTPLWSVFNCGYRREQDAVWAATRF 781

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: A0A836CFL3_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL3_9STRA)

HSP 1 Score: 249 bits (636), Expect = 7.370e-76
Identity = 122/241 (50.62%), Postives = 167/241 (69.29%), Query Frame = 0

Query:   26 GPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGD--SGHDSSEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFEFLERRKPPGL--MRCKVSGDLEARASAEHPPGTPLWSVFNCGYRREQDAVWAA 262
            G  +G  +LG+DCEM+ T  GLELAR +LVN +G+ VYD  V+P+  VT+++T++SGITA  L+GV+ +L+D Q ++L  +   TYLVGHSLD DL+AL+LVH R+IDT+ LYPSP+G P+K GLR L K +LGR +Q G   SGHDS  DA A++ELALLKM +G    LP  WA++P PP++ +F+ L R + P    +   V+GD E R   ++ P + LW+ F  GYRRE DA W A
Sbjct:   91 GHARGFKLLGIDCEMVETKKGLELARVSLVNARGEAVYDRHVRPSAPVTNHHTEYSGITAAHLEGVTATLKDVQADLLPLLDSHTYLVGHSLDGDLRALRLVHPRIIDTAVLYPSPKGMPYKRGLRQLCKELLGRDVQPGSGVSGHDSIMDAAAAMELALLKMAKGSTQGLPVPWASEPLPPRQPIFDALSRARSPTAEPLMISVAGDFEGRLDPQYRPESKLWTCFANGYRREADAAWLA 331

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: A0A6H5KCV4_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV4_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.920e-71
Identity = 117/138 (84.78%), Postives = 128/138 (92.75%), Query Frame = 0

Query:   10 GAFVPPSADRLCPILSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFK 147
            G FVPPSADRLCPI SGP KG V+LG+DCEM+YTS GLELARATLVNVKGQ+VYD+LVKPTL VTDYNTQFSGIT EML+GV+R+LRDAQREILSFV  ETYLVGHSLDSDL+AL+LVHRRLIDTSELYP+PRG PFK
Sbjct:  464 GEFVPPSADRLCPIPSGPHKGTVMLGLDCEMVYTSEGLELARATLVNVKGQMVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNPRGIPFK 601

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: A0A7S3XWP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP5_HETAK)

HSP 1 Score: 189 bits (481), Expect = 1.980e-57
Identity = 86/146 (58.90%), Postives = 115/146 (78.77%), Query Frame = 0

Query:   42 YTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMH 187
            YT AGLEL R TLVN K + +YD +VKP   +TD+NTQ+SGIT + +QG + +L++AQ +++ F+GPETY+ GHS+DSDL+ALKL+H R+IDT+ LYPSPRG PFKN L+ L+K  LGR IQ  + GHDS++DA A+L+L LLK H
Sbjct:    1 YTEAGLELTRVTLVNHKSETLYDTIVKPARPITDFNTQYSGITEKDMQGPTVNLQEAQAKLMEFIGPETYVAGHSIDSDLRALKLIHHRIIDTAVLYPSPRGLPFKNSLKNLTKRYLGRQIQESEDGHDSAQDAVATLQLVLLKAH 146

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: A0A1Y1IAJ6_KLENI (Exonuclease family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAJ6_KLENI)

HSP 1 Score: 201 bits (512), Expect = 3.290e-56
Identity = 108/194 (55.67%), Postives = 136/194 (70.10%), Query Frame = 0

Query:   24 LSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAF-ELPSVWAAKPNPPKESLFEFLERR 216
            L+G  K + ++ VDCEM YT AGLEL R TLV+ KG+V+ D+LVKPT  + DYNT+FSGITAEMLQ V+ +L+D Q E+L  V  ET LVGHSL SDL+ALKL+H   IDT+  +P PRG P+K  LRVL++  L R IQGGD GHDS EDA A++ELA LK+  GP+F E  ++         ESL E L R+
Sbjct:  382 LAGTKKRQPMVAVDCEMCYTEAGLELTRVTLVSGKGKVLLDKLVKPTNPIRDYNTKFSGITAEMLQDVTTTLQDIQAELLELVSAETILVGHSLQSDLQALKLIHGNNIDTALAFPHPRGPPYKPALRVLAERHLHRTIQGGDKGHDSVEDARATMELAQLKIQNGPSFGEARAIIG-------ESLIELLGRK 568

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: A0A2P2LGX3_RHIMU (Small RNA degrading nuclease 5 isoform X2 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LGX3_RHIMU)

HSP 1 Score: 191 bits (484), Expect = 1.560e-54
Identity = 102/200 (51.00%), Postives = 128/200 (64.00%), Query Frame = 0

Query:   33 VLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFEFLERRKPPGLMRC-KVSGDLE 231
            +L +DCEM  +  G EL R T+V+VKGQVV D+LVKP+ D+ DYNT+FSGIT EML+GV+ SL+D Q   L  V  ET LVGHSL++DL ALK+ H  +IDT+ LY  PRG  +K  LRVL+K  L R IQ  D GHDS EDA A++ELALLK+  GP F  P                FL R+ P  L  C K+S  ++
Sbjct:   73 ILALDCEMCISREGFELTRVTMVDVKGQVVLDKLVKPSNDIVDYNTRFSGITCEMLEGVTTSLKDVQENFLKLVCKETILVGHSLENDLLALKISHESVIDTALLYKHPRGGSYKTALRVLAKRFLSREIQQSDVGHDSIEDAKAAMELALLKIRNGPDFGSPP--------------SFLRRKLPTVLSECGKISSFID 258

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: A0A1U8AV44_NELNU (small RNA degrading nuclease 5 isoform X1 n=3 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AV44_NELNU)

HSP 1 Score: 193 bits (491), Expect = 5.380e-54
Identity = 99/180 (55.00%), Postives = 128/180 (71.11%), Query Frame = 0

Query:   22 PILSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAK 201
            PI S P +   +LG+DCEM  T+ G EL R TLV+++GQVV D+LVKP+ D+ DYNT++SGITAEML GV+ +L+D Q E+L  V  ET LVGHSL++DL ALK+ H  +IDT+ LY  PRG  FK  LRVL++  L R IQG  +GHDS EDA A++ELALLK+  GP +  P  +  K
Sbjct:  250 PIGSSPYE---MLGLDCEMCVTANGFELTRVTLVDIEGQVVLDKLVKPSNDIIDYNTRYSGITAEMLDGVTTTLKDIQEELLKLVYKETILVGHSLENDLLALKISHDMVIDTAVLYKHPRGGHFKTALRVLARRFLSREIQGSGNGHDSVEDARAAMELALLKIRHGPEYGSPPTFMRK 426

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: A0A2P2LGV2_RHIMU (Small RNA degrading nuclease 5 isoform X1 n=4 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LGV2_RHIMU)

HSP 1 Score: 191 bits (484), Expect = 2.890e-53
Identity = 102/200 (51.00%), Postives = 128/200 (64.00%), Query Frame = 0

Query:   33 VLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFEFLERRKPPGLMRC-KVSGDLE 231
            +L +DCEM  +  G EL R T+V+VKGQVV D+LVKP+ D+ DYNT+FSGIT EML+GV+ SL+D Q   L  V  ET LVGHSL++DL ALK+ H  +IDT+ LY  PRG  +K  LRVL+K  L R IQ  D GHDS EDA A++ELALLK+  GP F  P                FL R+ P  L  C K+S  ++
Sbjct:  218 ILALDCEMCISREGFELTRVTMVDVKGQVVLDKLVKPSNDIVDYNTRFSGITCEMLEGVTTSLKDVQENFLKLVCKETILVGHSLENDLLALKISHESVIDTALLYKHPRGGSYKTALRVLAKRFLSREIQQSDVGHDSIEDAKAAMELALLKIRNGPDFGSPP--------------SFLRRKLPTVLSECGKISSFID 403

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: UPI000B8CFD97 (small RNA degrading nuclease 5 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CFD97)

HSP 1 Score: 186 bits (473), Expect = 3.620e-53
Identity = 98/174 (56.32%), Postives = 120/174 (68.97%), Query Frame = 0

Query:   22 PILSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELP 195
            P  SG L    +L +DCEM  T+ G EL R TLV++KGQVV D+LVKP+  + DYNT+FSGIT+EML GV+ SL+D Q E L  V  ET LVGHSL++DL ALK+ H  +IDT+ LY  PRG   K  LRVL+K  L + IQ   SGHDS EDA A++ELALLK+  GP F  P
Sbjct:   38 PAPSGSLNE--ILALDCEMCITTEGFELTRLTLVDIKGQVVLDKLVKPSNSIIDYNTRFSGITSEMLDGVTTSLQDIQEEFLKLVNKETILVGHSLENDLSALKIFHELVIDTAVLYKHPRGGSHKTALRVLAKRFLCKEIQQSGSGHDSIEDARAAMELALLKIKNGPDFGSP 209

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BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Match: A0A444Z2Y9_ARAHY (Exonuclease domain-containing protein n=8 Tax=Arachis TaxID=3817 RepID=A0A444Z2Y9_ARAHY)

HSP 1 Score: 190 bits (483), Expect = 4.040e-53
Identity = 96/169 (56.80%), Postives = 120/169 (71.01%), Query Frame = 0

Query:   33 VLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAK 201
            +L +DCEM  T+ G EL R TLVN+ GQVV D+LVKP+ D+ DYNT+FSGIT EML GV+ +LRD Q+E L  V  ET+LVGHSL++DL ALK+ H  +IDT+ LY +PRG  +K  LR L+K  L R IQ   SGHDS EDA A++ELALLK+  GP F  P  +  K
Sbjct:  219 ILALDCEMCITTEGFELTRVTLVNINGQVVIDKLVKPSNDIVDYNTRFSGITYEMLDGVTTTLRDIQKEFLELVYKETFLVGHSLENDLLALKISHDLIIDTAVLYKNPRGASYKTALRHLAKRFLSREIQNLASGHDSVEDARATMELALLKIRNGPDFGSPPSFMRK 387

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQ11_ECTSI	1.380e-150	87.11	Exonuclease domain-containing protein n=1 Tax=Ecto...	[more]
A0A836CFL3_9STRA	7.370e-76	50.62	Exonuclease domain-containing protein n=1 Tax=Trib...	[more]
A0A6H5KCV4_9PHAE	1.920e-71	84.78	Exonuclease domain-containing protein n=1 Tax=Ecto...	[more]
A0A7S3XWP5_HETAK	1.980e-57	58.90	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A1Y1IAJ6_KLENI	3.290e-56	55.67	Exonuclease family protein n=1 Tax=Klebsormidium n...	[more]
A0A2P2LGX3_RHIMU	1.560e-54	51.00	Small RNA degrading nuclease 5 isoform X2 n=1 Tax=...	[more]
A0A1U8AV44_NELNU	5.380e-54	55.00	small RNA degrading nuclease 5 isoform X1 n=3 Tax=...	[more]
A0A2P2LGV2_RHIMU	2.890e-53	51.00	Small RNA degrading nuclease 5 isoform X1 n=4 Tax=...	[more]
UPI000B8CFD97	3.620e-53	56.32	small RNA degrading nuclease 5 n=1 Tax=Carica papa...	[more]
A0A444Z2Y9_ARAHY	4.040e-53	56.80	Exonuclease domain-containing protein n=8 Tax=Arac...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 32..191 e-value: 1.9E-40 score: 150.3
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 35..132 e-value: 2.2E-7 score: 31.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 31..191 e-value: 2.8E-49 score: 169.1
None	No IPR available	PANTHER	PTHR12801:SF115	LD29573P	coord: 29..196
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 29..196
IPR034922	RNA exonuclease 1-like, exonuclease domain	CDD	cd06145	REX1_like	coord: 34..183 e-value: 4.05176E-88 score: 256.643
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 35..185

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs9905	contig	H-canaliculatus_M_contigs9905:4..4545 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs9905.1.1	mRNA_H-canaliculatus_M_contigs9905.1.1	Hapterophycus canaliculatus Oshoro7m male	mRNA	H-canaliculatus_M_contigs9905 4..4545 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_M_contigs9905.1.1 ID=prot_H-canaliculatus_M_contigs9905.1.1|Name=mRNA_H-canaliculatus_M_contigs9905.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=268bp
KEEREGEGGGAFVPPSADRLCPILSGPLKGRVVLGVDCEMIYTSAGLELA
RATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQR
EILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGL
RVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAA
KPNPPKESLFEFLERRKPPGLMRCKVSGDLEARASAEHPPGTPLWSVFNC
GYRREQDAVWAAECFRE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR034922	REX1-like_exo
IPR036397	RNaseH_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3