mRNA_H-canaliculatus_M_contigs9905.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: Exonuclease (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ11_ECTSI) HSP 1 Score: 454 bits (1168), Expect = 1.380e-150 Identity = 223/256 (87.11%), Postives = 235/256 (91.80%), Query Frame = 1
Query: 28 GAFVPPSADRLCPILSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFEFLERRKPPGLMRCKVSGDLEARASAEHPPGTPLWSVFNCGYRREQDAVWAAECF 795
G FVPPSA RLCPI SGP KG V+LG+DCEMIYTS GLELARATLVNVKGQ VYD+LVKPTL VTDYNTQFSGIT EML+GV+R+LRDAQREILSFV ETYLVGHSLDSDL+AL+LVHRRLIDTSELYP+ RG PFKNGLRVLSKTVLGRAIQGGD+GHDS EDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFE LERR+P +RCKVSGDLEAR SAEHPPGTPLWSVFNCGYRREQDAVWAA F
Sbjct: 526 GEFVPPSAGRLCPIPSGPHKGTVMLGLDCEMIYTSEGLELARATLVNVKGQTVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNLRGIPFKNGLRVLSKTVLGRAIQGGDAGHDSGEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFESLERREPTRPLRCKVSGDLEARGSAEHPPGTPLWSVFNCGYRREQDAVWAATRF 781
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: Exonuclease (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL3_9STRA) HSP 1 Score: 249 bits (636), Expect = 7.370e-76 Identity = 122/241 (50.62%), Postives = 167/241 (69.29%), Query Frame = 1
Query: 76 GPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGD--SGHDSSEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFEFLERRKPPGL--MRCKVSGDLEARASAEHPPGTPLWSVFNCGYRREQDAVWAA 786
G +G +LG+DCEM+ T GLELAR +LVN +G+ VYD V+P+ VT+++T++SGITA L+GV+ +L+D Q ++L + TYLVGHSLD DL+AL+LVH R+IDT+ LYPSP+G P+K GLR L K +LGR +Q G SGHDS DA A++ELALLKM +G LP WA++P PP++ +F+ L R + P + V+GD E R ++ P + LW+ F GYRRE DA W A
Sbjct: 91 GHARGFKLLGIDCEMVETKKGLELARVSLVNARGEAVYDRHVRPSAPVTNHHTEYSGITAAHLEGVTATLKDVQADLLPLLDSHTYLVGHSLDGDLRALRLVHPRIIDTAVLYPSPKGMPYKRGLRQLCKELLGRDVQPGSGVSGHDSIMDAAAAMELALLKMAKGSTQGLPVPWASEPLPPRQPIFDALSRARSPTAEPLMISVAGDFEGRLDPQYRPESKLWTCFANGYRREADAAWLA 331
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: Exonuclease (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV4_9PHAE) HSP 1 Score: 239 bits (610), Expect = 1.920e-71 Identity = 117/138 (84.78%), Postives = 128/138 (92.75%), Query Frame = 1
Query: 28 GAFVPPSADRLCPILSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFK 441
G FVPPSADRLCPI SGP KG V+LG+DCEM+YTS GLELARATLVNVKGQ+VYD+LVKPTL VTDYNTQFSGIT EML+GV+R+LRDAQREILSFV ETYLVGHSLDSDL+AL+LVHRRLIDTSELYP+PRG PFK
Sbjct: 464 GEFVPPSADRLCPIPSGPHKGTVMLGLDCEMVYTSEGLELARATLVNVKGQMVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNPRGIPFK 601
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP5_HETAK) HSP 1 Score: 189 bits (481), Expect = 1.980e-57 Identity = 86/146 (58.90%), Postives = 115/146 (78.77%), Query Frame = 1
Query: 124 YTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMH 561
YT AGLEL R TLVN K + +YD +VKP +TD+NTQ+SGIT + +QG + +L++AQ +++ F+GPETY+ GHS+DSDL+ALKL+H R+IDT+ LYPSPRG PFKN L+ L+K LGR IQ + GHDS++DA A+L+L LLK H
Sbjct: 1 YTEAGLELTRVTLVNHKSETLYDTIVKPARPITDFNTQYSGITEKDMQGPTVNLQEAQAKLMEFIGPETYVAGHSIDSDLRALKLIHHRIIDTAVLYPSPRGLPFKNSLKNLTKRYLGRQIQESEDGHDSAQDAVATLQLVLLKAH 146
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: Exonuclease (family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAJ6_KLENI) HSP 1 Score: 201 bits (512), Expect = 3.290e-56 Identity = 108/194 (55.67%), Postives = 136/194 (70.10%), Query Frame = 1
Query: 70 LSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAF-ELPSVWAAKPNPPKESLFEFLERR 648
L+G K + ++ VDCEM YT AGLEL R TLV+ KG+V+ D+LVKPT + DYNT+FSGITAEMLQ V+ +L+D Q E+L V ET LVGHSL SDL+ALKL+H IDT+ +P PRG P+K LRVL++ L R IQGGD GHDS EDA A++ELA LK+ GP+F E ++ ESL E L R+
Sbjct: 382 LAGTKKRQPMVAVDCEMCYTEAGLELTRVTLVSGKGKVLLDKLVKPTNPIRDYNTKFSGITAEMLQDVTTTLQDIQAELLELVSAETILVGHSLQSDLQALKLIHGNNIDTALAFPHPRGPPYKPALRVLAERHLHRTIQGGDKGHDSVEDARATMELAQLKIQNGPSFGEARAIIG-------ESLIELLGRK 568
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: Small (RNA degrading nuclease 5 isoform X2 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LGX3_RHIMU) HSP 1 Score: 191 bits (484), Expect = 1.560e-54 Identity = 102/200 (51.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query: 97 VLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFEFLERRKPPGLMRC-KVSGDLE 693
+L +DCEM + G EL R T+V+VKGQVV D+LVKP+ D+ DYNT+FSGIT EML+GV+ SL+D Q L V ET LVGHSL++DL ALK+ H +IDT+ LY PRG +K LRVL+K L R IQ D GHDS EDA A++ELALLK+ GP F P FL R+ P L C K+S ++
Sbjct: 73 ILALDCEMCISREGFELTRVTMVDVKGQVVLDKLVKPSNDIVDYNTRFSGITCEMLEGVTTSLKDVQENFLKLVCKETILVGHSLENDLLALKISHESVIDTALLYKHPRGGSYKTALRVLAKRFLSREIQQSDVGHDSIEDAKAAMELALLKIRNGPDFGSPP--------------SFLRRKLPTVLSECGKISSFID 258
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: small (RNA degrading nuclease 5 isoform X1 n=3 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AV44_NELNU) HSP 1 Score: 193 bits (491), Expect = 5.380e-54 Identity = 99/180 (55.00%), Postives = 128/180 (71.11%), Query Frame = 1
Query: 64 PILSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAK 603
PI S P + +LG+DCEM T+ G EL R TLV+++GQVV D+LVKP+ D+ DYNT++SGITAEML GV+ +L+D Q E+L V ET LVGHSL++DL ALK+ H +IDT+ LY PRG FK LRVL++ L R IQG +GHDS EDA A++ELALLK+ GP + P + K
Sbjct: 250 PIGSSPYE---MLGLDCEMCVTANGFELTRVTLVDIEGQVVLDKLVKPSNDIIDYNTRYSGITAEMLDGVTTTLKDIQEELLKLVYKETILVGHSLENDLLALKISHDMVIDTAVLYKHPRGGHFKTALRVLARRFLSREIQGSGNGHDSVEDARAAMELALLKIRHGPEYGSPPTFMRK 426
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: Small (RNA degrading nuclease 5 isoform X1 n=4 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LGV2_RHIMU) HSP 1 Score: 191 bits (484), Expect = 2.890e-53 Identity = 102/200 (51.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query: 97 VLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFEFLERRKPPGLMRC-KVSGDLE 693
+L +DCEM + G EL R T+V+VKGQVV D+LVKP+ D+ DYNT+FSGIT EML+GV+ SL+D Q L V ET LVGHSL++DL ALK+ H +IDT+ LY PRG +K LRVL+K L R IQ D GHDS EDA A++ELALLK+ GP F P FL R+ P L C K+S ++
Sbjct: 218 ILALDCEMCISREGFELTRVTMVDVKGQVVLDKLVKPSNDIVDYNTRFSGITCEMLEGVTTSLKDVQENFLKLVCKETILVGHSLENDLLALKISHESVIDTALLYKHPRGGSYKTALRVLAKRFLSREIQQSDVGHDSIEDAKAAMELALLKIRNGPDFGSPP--------------SFLRRKLPTVLSECGKISSFID 403
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: small (RNA degrading nuclease 5 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CFD97) HSP 1 Score: 186 bits (473), Expect = 3.620e-53 Identity = 98/174 (56.32%), Postives = 120/174 (68.97%), Query Frame = 1
Query: 64 PILSGPLKGRVVLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELP 585
P SG L +L +DCEM T+ G EL R TLV++KGQVV D+LVKP+ + DYNT+FSGIT+EML GV+ SL+D Q E L V ET LVGHSL++DL ALK+ H +IDT+ LY PRG K LRVL+K L + IQ SGHDS EDA A++ELALLK+ GP F P
Sbjct: 38 PAPSGSLNE--ILALDCEMCITTEGFELTRLTLVDIKGQVVLDKLVKPSNSIIDYNTRFSGITSEMLDGVTTSLQDIQEEFLKLVNKETILVGHSLENDLSALKIFHELVIDTAVLYKHPRGGSHKTALRVLAKRFLCKEIQQSGSGHDSIEDARAAMELALLKIKNGPDFGSP 209
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Match: Exonuclease (domain-containing protein n=8 Tax=Arachis TaxID=3817 RepID=A0A444Z2Y9_ARAHY) HSP 1 Score: 190 bits (483), Expect = 4.040e-53 Identity = 96/169 (56.80%), Postives = 120/169 (71.01%), Query Frame = 1
Query: 97 VLGVDCEMIYTSAGLELARATLVNVKGQVVYDELVKPTLDVTDYNTQFSGITAEMLQGVSRSLRDAQREILSFVGPETYLVGHSLDSDLKALKLVHRRLIDTSELYPSPRGTPFKNGLRVLSKTVLGRAIQGGDSGHDSSEDAFASLELALLKMHRGPAFELPSVWAAK 603
+L +DCEM T+ G EL R TLVN+ GQVV D+LVKP+ D+ DYNT+FSGIT EML GV+ +LRD Q+E L V ET+LVGHSL++DL ALK+ H +IDT+ LY +PRG +K LR L+K L R IQ SGHDS EDA A++ELALLK+ GP F P + K
Sbjct: 219 ILALDCEMCITTEGFELTRVTLVNINGQVVIDKLVKPSNDIVDYNTRFSGITYEMLDGVTTTLRDIQKEFLELVYKETFLVGHSLENDLLALKISHDLIIDTAVLYKNPRGASYKTALRHLAKRFLSREIQNLASGHDSVEDARATMELALLKIRNGPDFGSPPSFMRK 387 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9905.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9905.1.1 >prot_H-canaliculatus_M_contigs9905.1.1 ID=prot_H-canaliculatus_M_contigs9905.1.1|Name=mRNA_H-canaliculatus_M_contigs9905.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=268bp KEEREGEGGGAFVPPSADRLCPILSGPLKGRVVLGVDCEMIYTSAGLELAback to top mRNA from alignment at H-canaliculatus_M_contigs9905:4..4545+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9905.1.1 ID=mRNA_H-canaliculatus_M_contigs9905.1.1|Name=mRNA_H-canaliculatus_M_contigs9905.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4542bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9905:4..4545+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9905:4..4545+ >mRNA_H-canaliculatus_M_contigs9905.1.1 ID=mRNA_H-canaliculatus_M_contigs9905.1.1|Name=mRNA_H-canaliculatus_M_contigs9905.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=804bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9905:4..4545+ (Hapterophycus canaliculatus Oshoro7m male)back to top |