prot_H-canaliculatus_M_contigs9707.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_M_contigs9707.1.1
Unique Name	prot_H-canaliculatus_M_contigs9707.1.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length	259

Homology

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: D7G6S0_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6S0_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 3.860e-89
Identity = 162/192 (84.38%), Postives = 170/192 (88.54%), Query Frame = 0

Query:   64 PSPVVAGSWGDRAGYVDDGYMRQDPNILPGGGTPLASTTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVP-SLYPYQQPAGTFPGAYGGGGXXXXXXXXXXXXXXXXXGNFY-GQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGETRHD 253
            PSPVVAGSWG+R GYV++GYMRQDPNI+ G GTP+ASTTS NGEG FMVSTGGANAMGAP+QSFYPPSLYGVP S+YPYQQP G F        XXXXXXXXXXXXXXX  GNFY GQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFG   +D
Sbjct:   21 PSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPMQSFYPPSLYGVPTSVYPYQQP-GAFXXXXXXX-XXXXXXXXXXXXXXXAGGNFYAGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYD 210

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: A0A6H5L539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L539_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 6.520e-41
Identity = 70/82 (85.37%), Postives = 76/82 (92.68%), Query Frame = 0

Query:   64 PSPVVAGSWGDRAGYVDDGYMRQDPNILPGGGTPLASTTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVP-SLYPYQQP 144
            PSPVVAGSWG+R GYV++GYMRQDPNI+ G GTP+ASTTS NGEG FMVSTGGANAMGAPLQSFYPPSLYGVP S+YPYQQP
Sbjct:   19 PSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPLQSFYPPSLYGVPPSVYPYQQP 100

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: A0A835Z2R7_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.290e-24
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0

Query:  188 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFG 248
            PG PIQTT +LQGP+GCNLFVFHIPN MTN  L+ LF ++G VISARIMV+KATGRSRGFG
Sbjct:   21 PGAPIQTTKDLQGPEGCNLFVFHIPNDMTNNDLYSLFCEYGEVISARIMVDKATGRSRGFG 81

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: D0NCQ3_PHYIT (CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phytophthora TaxID=4783 RepID=D0NCQ3_PHYIT)

HSP 1 Score: 105 bits (262), Expect = 1.340e-23
Identity = 70/150 (46.67%), Postives = 76/150 (50.67%), Query Frame = 0

Query:  108 GGFMV---STGGANAMGAPLQSFYPPSLYGVPSLYPYQQPAGTFPGAYGGGGXXXXXXXXXXXXXXXXXGNFYGQGGYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGETRHD 253
            GGF       GG  A GA     YP          PY QP   +P  YGG G                        GY  +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFG   +D
Sbjct:   74 GGFQQPQPQLGGQGAQGAAAYGAYP---------QPYGQPM-QYPPPYGGSGYMYPFPQAY---------------GYPPQIVGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYD 198

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: A0A6H5L5J0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J0_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.340e-23
Identity = 52/60 (86.67%), Postives = 53/60 (88.33%), Query Frame = 0

Query:  194 TTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGETRHD 253
            T   L GPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFG   +D
Sbjct:    6 TGDGLAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYD 65

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: M4B497_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B497_HYAAE)

HSP 1 Score: 105 bits (262), Expect = 1.580e-23
Identity = 68/170 (40.00%), Postives = 79/170 (46.47%), Query Frame = 0

Query:   84 MRQDPNILPGGGTPLASTTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVPSLYPYQQPAGTFPGAYGGGGXXXXXXXXXXXXXXXXXGNFYGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGETRHD 253
            ++Q      G   P     S   +G      G +   G P+Q  YPP   G   +YP+ Q  G  P   G                                  PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFG   +D
Sbjct:   71 LQQQQPTAAGFPQPQQQLDSQGSQGAAAAYGGYSQPYGQPMQ--YPPPYGGSSYMYPFPQAYGYPPQIVG----------------------------------PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYD 204

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: A0A7S2V9D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9D2_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.290e-23
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0

Query:  188 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGETRHD 253
            PG PIQTT   QGP+GCNLFVFHIPN+MTN  L+ LF +FGNV+SARIMVEK TGRSRGFG   +D
Sbjct:   41 PGAPIQTTPLGQGPEGCNLFVFHIPNSMTNVDLYHLFLRFGNVVSARIMVEKHTGRSRGFGFISYD 106

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: K3WGX7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGX7_GLOUD)

HSP 1 Score: 103 bits (257), Expect = 5.430e-23
Identity = 52/74 (70.27%), Postives = 57/74 (77.03%), Query Frame = 0

Query:  181 GYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGETRHD 253
            GYA +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFG   +D
Sbjct:  121 GYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYD 194

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: A0A6G0XPK1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPK1_9STRA)

HSP 1 Score: 103 bits (257), Expect = 8.860e-23
Identity = 52/74 (70.27%), Postives = 57/74 (77.03%), Query Frame = 0

Query:  181 GYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGETRHD 253
            GYA +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFG   +D
Sbjct:  150 GYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYD 223

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BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Match: A0A8K1CK88_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK88_PYTOL)

HSP 1 Score: 102 bits (254), Expect = 1.480e-22
Identity = 51/74 (68.92%), Postives = 57/74 (77.03%), Query Frame = 0

Query:  181 GYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGETRHD 253
            GYA +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ +GNVISARIMVEK TGRSRGFG   +D
Sbjct:  113 GYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFAPYGNVISARIMVEKETGRSRGFGFVSYD 186

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_M_contigs9707.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6S0_ECTSI	3.860e-89	84.38	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5L539_9PHAE	6.520e-41	85.37	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z2R7_9STRA	5.290e-24	77.05	RRM domain-containing protein n=1 Tax=Tribonema mi...	[more]
D0NCQ3_PHYIT	1.340e-23	46.67	CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phy...	[more]
A0A6H5L5J0_9PHAE	1.340e-23	86.67	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
M4B497_HYAAE	1.580e-23	40.00	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]
A0A7S2V9D2_9STRA	4.290e-23	72.73	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
K3WGX7_GLOUD	5.430e-23	70.27	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A6G0XPK1_9STRA	8.860e-23	70.27	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A8K1CK88_PYTOL	1.480e-22	68.92	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 181..249 e-value: 3.6E-14 score: 54.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 206..248 e-value: 3.0E-9 score: 36.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 204..248 score: 10.309022
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR48024:SF29	GEO13361P1	coord: 57..248
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 57..248
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 167..248

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs9707	contig	H-canaliculatus_M_contigs9707:168..4112 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs9707.1.1	mRNA_H-canaliculatus_M_contigs9707.1.1	Hapterophycus canaliculatus Oshoro7m male	mRNA	H-canaliculatus_M_contigs9707 168..4112 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_M_contigs9707.1.1 ID=prot_H-canaliculatus_M_contigs9707.1.1|Name=mRNA_H-canaliculatus_M_contigs9707.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=259bp
MSYQQQHQGAPDSSRRQQQATPYPLLGTSGAAAAGRAPAAAVYGMPQQYG
QQQQQADGYGGPPPSPVVAGSWGDRAGYVDDGYMRQDPNILPGGGTPLAS
TTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVPSLYPYQQPAGTFPG
AYGGGGGAGGGAGAAGGAGSTAGGNFYGQGGYARSTNPGQPIQTTTNLQG
PDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGET
RHDYLYRS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf