mRNA_H-canaliculatus_M_contigs891.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ6_ECTSI) HSP 1 Score: 221 bits (562), Expect = 4.420e-70 Identity = 108/125 (86.40%), Postives = 116/125 (92.80%), Query Frame = 1
Query: 34 MNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVPK 408
MNRCASGIKGVLETLAN+LKQ EEEIK DEAGK EFERRL+QL EKKREI+ RIDANMRWT+SFDQDLGPF +MYKAKTKEIASIYDDAK RH+EG+KVLV+EF YHPEFFRPKD FHATPFVPK
Sbjct: 1 MNRCASGIKGVLETLANKLKQQEEEIKADEAGKLEFERRLSQLREKKREIESRIDANMRWTASFDQDLGPFAKMYKAKTKEIASIYDDAKARHREGVKVLVNEFNYHPEFFRPKDGFHATPFVPK 125
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DC27_9EUKA) HSP 1 Score: 112 bits (281), Expect = 1.510e-27 Identity = 55/133 (41.35%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 10 ITIKHFRGMNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVPK 408
I I +N AS I +LE ++QL EIK D+ G ++ER+L L +KR+++ RI+AN +W +S+D ++GPF Q Y T ++ +YD+AKE+H G+ +L +EF YHP F R D F A PF P+
Sbjct: 9 IGIAQTHQLNSNASNIANLLENAQTAVEQLNTEIKADDKGIEDWERQLGYLTRRKRDLEKRIEANTKWATSYDGEIGPFTQKYDNFTSDLGKLYDNAKEKHAGGLDILKEEFEYHPAFKRWHDYFSAVPFKPE 141
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS68_9STRA) HSP 1 Score: 114 bits (285), Expect = 6.420e-25 Identity = 54/125 (43.20%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 34 MNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVPK 408
MNR +SG+ GVLETL ++ LE EI+ DE GK +++ +L +LG+++ ++ ++ + W + FD+ + P E Y T + + Y+DAK RH +G++VLVD F YHPEF R D+F A PF PK
Sbjct: 1246 MNRASSGLGGVLETLELRIDTLEREIRADEKGKQDYDDQLFRLGQRRADLDAKLRESQDWIALFDRSIKPLEGKYSETTGHMQAQYEDAKLRHAQGVRVLVDNFDYHPEFKRFSDTFSAVPFKPK 1370
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQL8_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.450e-24 Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 19 KHFRGMNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVPK 408
K R MNR SGI G LE + + QL EIK DE GK +++ +L +L +++++++ ++ W++ F+ + P Y T + Y+DAK RH +GIKVL++ F YHPEF R D+F A PF PK
Sbjct: 26 KDARKMNRVTSGIGGALEGVQMTINQLNREIKADEKGKQDYDDQLFRLNQRRKDMEAKLLECREWSALFESKIKPLAGKYTETTDNMQGQYEDAKLRHAQGIKVLIENFDYHPEFKRFSDTFSAVPFKPK 155
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTT7_GLOUD) HSP 1 Score: 112 bits (281), Expect = 2.150e-24 Identity = 53/133 (39.85%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 10 ITIKHFRGMNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVPK 408
++ K MNR SGI GVL+ L ++ L+ EIK DE GK +++ +L +L +++ +++ ++ + W + F+ + P E Y T+ + S Y+DAK RH +GI+VL+D F YHPEF R D+F A PF PK
Sbjct: 1143 MSAKDVSKMNRATSGIGGVLDNLQTKIDMLDREIKADEKGKQDYDDQLFRLRKRREDLEAKLRESQNWIALFESKIAPLEGKYAETTENMQSQYEDAKLRHAQGIRVLMDNFEYHPEFKRFSDTFSAVPFKPK 1275
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MXB1_PHYIT) HSP 1 Score: 101 bits (252), Expect = 4.410e-23 Identity = 49/125 (39.20%), Postives = 76/125 (60.80%), Query Frame = 1
Query: 34 MNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVPK 408
MNR SGI G LE + +++ L EIK DE GK +++ +L +L E++++++ ++ W++ F+ + P Y T + YD+AK+RH +GI VL+ F YHPEF R D+F A PF PK
Sbjct: 32 MNRVTSGIGGALEGVQMRIETLTREIKADEKGKKDYDEQLFRLNERRKDLEAKLKECREWSALFESKIKPLAGKYTETTDSMQGQYDEAKQRHAQGIIVLMQNFDYHPEFKRFSDTFTAVPFKPK 156
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW89_9STRA) HSP 1 Score: 105 bits (261), Expect = 9.370e-22 Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 19 KHFRGMNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVPK 408
K R MNR SGI G LE + + QL EIK DE GK +++ +L +L +++++++ ++ W++ F+ + P Y T + Y+DAK RH +GIKVL++ F YHPEF R D+F A PF PK
Sbjct: 1101 KDARKMNRVTSGIGGALEGVQMTINQLSREIKADEKGKQDYDDQLFRLNQRRQDMEAKLLECREWSALFESKIKPLAGKYAETTDSMQGQYEDAKLRHAQGIKVLIENFDYHPEFKRFSDTFSAVPFKPK 1230
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Uncharacterized (protein n=3 Tax=Volvox TaxID=3066 RepID=D8TP60_VOLCA) HSP 1 Score: 97.8 bits (242), Expect = 1.910e-21 Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 10 ITIKHFRGMNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQD-LGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVP 405
+T++ F N ++ I G + L LK+LE+++K DEAGK EFE L QL K+ ++Q ++D N W + +Q EQ YK ++I +IY+ AKE H +GI +L+ EF YH + R DSF A PF P
Sbjct: 15 VTVQEF---NHTSTSIGGTADGLRRSLKELEDDLKKDEAGKKEFETYLKQLETKRADLQRKVDENKAWLEAIEQQGSNSSEQQYKRLLEQIQTIYEGAKEFHGKGIDMLIKEFGYHIAYKRWNDSFTAIPFKP 144
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YJN4_9CRYP) HSP 1 Score: 91.7 bits (226), Expect = 2.760e-19 Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 25 FRGMNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFDQDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVP 405
F+ CA +K ++E QL EIK DE G ++ ++ +L ++++ +Q RI N W +++D++ GPF YK ++ +Y AK +H +G+K+L++ F YHPEF R D+F A PF P
Sbjct: 29 FKVTTNCAFSVK-IMENFKISSDQLLSEIKADEKGLEDYGGQIMRLKQRRQFLQKRIVENQAWAANYDENFGPFVAKYKDFMDQMDKLYQQAKVKHADGLKLLMEHFAYHPEFKRWSDTFSAVPFRP 154
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Match: FAP286 (protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H1N4_GONPE) HSP 1 Score: 90.5 bits (223), Expect = 6.820e-19 Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = 1
Query: 10 ITIKHFRGMNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRLAQLGEKKREIQGRIDANMRWTSSFD-QDLGPFEQMYKAKTKEIASIYDDAKERHKEGIKVLVDEFRYHPEFFRPKDSFHATPFVPK 408
IT++ F N ++ I G + L LK+LE E+K DEAGK E+E L +L ++ ++Q ++D N W + + Q + E YK +I IY+ AKE H +GI +L+ EF YH + R D+F A PF PK
Sbjct: 21 ITVQQF---NHTSTSIGGTADGLRRSLKELEAELKKDEAGKKEYEAYLKRLEIQRADLQRKVDENRAWLDAVEAQGMESAESKYKQLLDQIQQIYEGAKEFHGKGIDLLIKEFGYHIAYKRWNDTFTAIPFKPK 151 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs891.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs891.1.1 >prot_H-canaliculatus_M_contigs891.1.1 ID=prot_H-canaliculatus_M_contigs891.1.1|Name=mRNA_H-canaliculatus_M_contigs891.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=137bp MAPITIKHFRGMNRCASGIKGVLETLANQLKQLEEEIKIDEAGKHEFERRback to top mRNA from alignment at H-canaliculatus_M_contigs891:7702..9370- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs891.1.1 ID=mRNA_H-canaliculatus_M_contigs891.1.1|Name=mRNA_H-canaliculatus_M_contigs891.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1669bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs891:7702..9370- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs891:7702..9370- >mRNA_H-canaliculatus_M_contigs891.1.1 ID=mRNA_H-canaliculatus_M_contigs891.1.1|Name=mRNA_H-canaliculatus_M_contigs891.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=411bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs891:7702..9370- (Hapterophycus canaliculatus Oshoro7m male)back to top |