mRNA_H-canaliculatus_M_contigs8900.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Bifunctional (dihydrofolate reductase-thymidylate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA4_ECTSI) HSP 1 Score: 171 bits (433), Expect = 9.300e-49 Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 1
Query: 1 RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+TNPEDRRIVLSAWNP+DLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVA+ ACGLKAGDFVHTI
Sbjct: 437 KTNPEDRRIVLSAWNPADLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQ--ACGLKAGDFVHTI 520
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Thymidylate (synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRZ6_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.170e-46 Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 1
Query: 1 RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+ NP DRRI+LSAWNP+DL MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASYALLTR+VA+VC LKAGDFVHTI
Sbjct: 38 KNNPTDRRILLSAWNPADLSLMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTRMVAQVCE--LKAGDFVHTI 121
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Bifunctional (dihydrofolate reductase-thymidylate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1L8_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.210e-46 Identity = 75/86 (87.21%), Postives = 83/86 (96.51%), Query Frame = 1
Query: 1 RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+ NPEDRRI++SAWNP+DLGKMALPPCHMFCQFYVA+GELSCQMYQRSADMGLGVPFNIASYALLTRLVA+VC GLKAG+F+HTI
Sbjct: 381 KDNPEDRRIIVSAWNPADLGKMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQVC--GLKAGEFIHTI 464
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Bifunctional (dihydrofolate reductase-thymidylate synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YHL1_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.670e-45 Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 1
Query: 1 RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+T+P DRRIVLSAWNP+DLG+MALPPCHMFCQFYVA+GELSCQMYQRSADMGLGVPFNIASYALLTRLVA VC GL+AG+FVH I
Sbjct: 348 KTSPNDRRIVLSAWNPADLGEMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYALLTRLVAAVC--GLRAGEFVHVI 431
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Thymidylate (synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QDS4_HETAK) HSP 1 Score: 154 bits (390), Expect = 7.310e-45 Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 1
Query: 1 RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+ +PEDRRI+L+AWNPS L MALPPCHMFCQFYVA+GELSCQMYQRSADMGLGVPFNIASY+LLTR++A+VC GLKAGDFVHTI
Sbjct: 148 KNSPEDRRIILTAWNPSALKDMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYSLLTRMMAQVC--GLKAGDFVHTI 231
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Bifunctional (dihydrofolate reductase-thymidylate synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7X0_9STRA) HSP 1 Score: 159 bits (401), Expect = 7.560e-45 Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 1
Query: 1 RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+ P+DRRI+LSAWNPSDLG MALPPCHMFCQFYVA+GELSCQMYQRSADMGLGVPFNIASYALLTR++A+VC GLKAGDF+H I
Sbjct: 325 KNKPDDRRILLSAWNPSDLGLMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYALLTRMIAQVC--GLKAGDFIHVI 408
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Thymidylate (synthase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRC1_9ARCH) HSP 1 Score: 153 bits (386), Expect = 2.700e-44 Identity = 71/86 (82.56%), Postives = 77/86 (89.53%), Query Frame = 1
Query: 1 RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+TNP DRRIV++AWNP+DL MALPPCHMFCQFYVA+GELSCQMYQRSADMGLGVPFNIASYALLT +VA V GLKAGDFVH I
Sbjct: 145 KTNPSDRRIVMTAWNPADLNSMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYALLTHMVAHVT--GLKAGDFVHVI 228
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Bifunctional (dihydrofolate reductase-thymidylate synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMI2_SAPPC) HSP 1 Score: 157 bits (396), Expect = 3.890e-44 Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 1
Query: 7 NPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+P DRRI+LSAWNPSDLG MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASYALLTR++A+VC GLKAGDF+H I
Sbjct: 324 SPNDRRILLSAWNPSDLGLMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTRMIAQVC--GLKAGDFIHVI 405
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Bifunctional (dihydrofolate reductase-thymidylate synthase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FA59_9STRA) HSP 1 Score: 156 bits (395), Expect = 4.830e-44 Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = 1
Query: 1 RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
RTNP DRRIVLSAWNP+DL +MALPPCHMFCQFYVA+GELSCQMYQRSADMGLGVPFNIASYALLTRLVA+V GLK+G+F+H I
Sbjct: 314 RTNPTDRRIVLSAWNPADLNEMALPPCHMFCQFYVADGELSCQMYQRSADMGLGVPFNIASYALLTRLVAQVA--GLKSGEFIHII 397
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Match: Bifunctional (dihydrofolate reductase-thymidylate synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSK5_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.350e-44 Identity = 71/84 (84.52%), Postives = 79/84 (94.05%), Query Frame = 1
Query: 7 NPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADMGLGVPFNIASYALLTRLVAKVCACGLKAGDFVHTI 258
+P+DRRI+LSAWNPSDLG MALPPCHMFCQFYVA GELSCQMYQRSADMGLGVPFNIASYALLTR++A+VC GL+AGDF+H I
Sbjct: 333 SPDDRRILLSAWNPSDLGLMALPPCHMFCQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTRMIAQVC--GLRAGDFIHVI 414 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8900.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8900.1.2 >prot_H-canaliculatus_M_contigs8900.1.2 ID=prot_H-canaliculatus_M_contigs8900.1.2|Name=mRNA_H-canaliculatus_M_contigs8900.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=86bp RTNPEDRRIVLSAWNPSDLGKMALPPCHMFCQFYVAEGELSCQMYQRSADback to top mRNA from alignment at H-canaliculatus_M_contigs8900:60..1270+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8900.1.2 ID=mRNA_H-canaliculatus_M_contigs8900.1.2|Name=mRNA_H-canaliculatus_M_contigs8900.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1211bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8900:60..1270+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8900:60..1270+ >mRNA_H-canaliculatus_M_contigs8900.1.2 ID=mRNA_H-canaliculatus_M_contigs8900.1.2|Name=mRNA_H-canaliculatus_M_contigs8900.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=258bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8900:60..1270+ (Hapterophycus canaliculatus Oshoro7m male)back to top |