mRNA_H-canaliculatus_M_contigs8895.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 4.900e-19 Identity = 81/221 (36.65%), Postives = 110/221 (49.77%), Query Frame = 1
Query: 10 AAGHTSVLRLLLKEGADVDATAPRDV-RYSPDEQLQVAEGQRAIHAAIDNIHIDCFRMLL-RAGTDVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGA-DPELRDVDGSTALHIAASMGRAEENIVRLLLDSGLEAIGGRLAVAPAAMETAFRAGRTRILGMLLAVEGVERRELWAGLSVEGSSMLHLAAAYGAVAAVGLLLASGADESAVD 663
A GHT +++ GA R++ R D Q G A+H A D +LL +A +N G TPL A G E +R LL GA D L G++AL A GR E IVR+LLD G++A+GG L P A+ TA R G +IL MLLAV G E R WA + S++LH A + G+++ + +L++GADE A D
Sbjct: 113 ATGHTPLMQACRLFGAADRYVVVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGY---------KESVRCLLSFGASDNALWSKKGASALVGAVQEGRQE--IVRILLDHGMDAVGG-LGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYNESTLLHCATSVGSLSVMSAILSAGADERARD 321
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 4.490e-18 Identity = 80/222 (36.04%), Postives = 120/222 (54.05%), Query Frame = 1
Query: 46 KEGADVDATAPRDVRYSPDEQLQVAEGQRAIHAAIDNIHIDCFRMLLRAGT--DVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGADPE-LRDVDGSTALHIAASMGRAEENIVRLLL-DSGLEAIGGRLAVAPAAMETAFRAGRTRILGMLLAVEGVERRELWAGLS-VEGSSMLHLAAAYGAVAAVGLLLASGADESAVDSKGRSVSEVVG 696
KEGA+ A ++ D L A+G+ A+H A + + + LL G+ +N G TPL A HC ++ +LL GA L++ + AA++G E+I+R+L + G++A+GG AV P ++ A R G+ RIL +LLA EG ER+E WA V G +++LAAAYG +A V +LLA+GADE+ D G + EV+G
Sbjct: 127 KEGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVE--------FVHC-GVVSLLLSAGASQRGLQEGNYPCPFRSAAALGY--ESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIG 337
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 5.300e-14 Identity = 74/192 (38.54%), Postives = 102/192 (53.12%), Query Frame = 1
Query: 133 AIHAAIDNIHIDCFRMLL-RAGTDVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGA--DPELRDVDGSTALHIAASMGRAEENIVRLLLDSGLEAIGGRLAVAPAAMETAFRAGRTRILGMLLAVEGVERRELWAGLS-VEGSSMLHLAAAYGAVAAVGLLLASGADESAVDSKGRSVSEVVG 696
A+H A D +LL RA + VN PN +G T L C A G E + C LL GA +P L +G +L IA +G E +VR+LLD G++A+GG LA++ A + + RIL MLL VEG ++R WA L +G+ LHLAAA ++ A +LL +GADE + + S VG
Sbjct: 162 ALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTAL---CYAASEGMEVAVSC------LLSAGARDNPSLF-ANGIGSLLIAVELGH--EQVVRVLLDRGVQAVGGELAMSYALRRSILKRF-PRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVG 340
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH7_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 5.770e-13 Identity = 56/199 (28.14%), Postives = 96/199 (48.24%), Query Frame = 1
Query: 28 VLRLLLKEGADVDATAPRDVRYSPDEQLQVAEGQRAIHAAIDNIHIDCFRMLLRAGTDVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGADPELRD----------------------------------VDGSTALHIAASMGRAEENIVRLLLDSGLEAIGGRLAVAPAAMETAFRAGRTRILGMLLA 522
++ LL GADV+A +P + D ++ + +G RAIH A+ + C ++L+ AG +++ S G TPLM+AC+ + EE H +EM++ ++E GA+P ++D DGST L++A+ G+ E V LLL +G + ++ A R RT ++ +LL+
Sbjct: 1 MIECLLNNGADVNAASPLMLHQGEDGRMSLCQGVRAIHVAVIHHDRKCLKVLIDAGANLDVTYSGGVTPLMAACKMRV--EE---HGIEMVKEVIEAGANPLIQDNKRWACLWYAINLGRIRTIQTILSVAPTTVNQVAPDGSTPLYMASGFGQYEA--VSLLLSAGAKQTRLSFEKGKCPLDVAVRQNRTDVVRVLLS 192
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 8.150e-13 Identity = 69/206 (33.50%), Postives = 110/206 (53.40%), Query Frame = 1
Query: 100 DEQLQVAEGQRAIHAAIDNIHIDCFRMLLRA-GTDVNAP-----NSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGADPELRDVDGSTALHIAASMGRAEENIVRLLLDSGLEAIGGRLAVAPAAMETAFRAGRTRILGMLLAV-EGVERRELWAGLSVEGSSMLHLAAAYGAVAAVGLLLASGADESAVDSKGRSVSEVVG 696
D ++ EGQ A+H A + + +LL+A G+ ++ + TPL SA E N V+ + LL GA + D +G L + ++ + E IVR+L ++GLE++GG V P ++ +A +AGRTR+L +LL V G WA V G +L++AA Y V VG+LLA+GADE D + ++ +++G
Sbjct: 142 DPLIEDREGQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSAL------ESNQ---VQAVAHLLSLGARATV-DREGRGNL-LRRAVVKNSEPIVRVLFEAGLESVGGAARVMPDSLASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYVWGGPLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIG 336
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A1B8D8N3_9PEZI) HSP 1 Score: 72.8 bits (177), Expect = 6.080e-11 Identity = 67/199 (33.67%), Postives = 93/199 (46.73%), Query Frame = 1
Query: 25 SVLRLLLKEGADVDATAPRDVRYSPDEQLQVAEGQRAIHAAIDNIHIDCFRMLLRAGTDVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGADPELRDVDGSTALHIAASMGRAEENIVRLLLDSGLEAIGGRLAVAPAAMETAFRAGRTRILGMLLAVEGVERRELW---AGLSV---EGSSMLHLAAAY 603
S +RLLL AD+D L+ EG+ A+ A+ + C +L+ AGTDVNA + +TPL A R E S VEM+++LL GA+P+ D D TAL EN V + + + L + GG M+ GRT I+ + A + R LW AGL + G S+LHLA Y
Sbjct: 637 SAVRLLLSWKADLD--------------LRDFEGRTALSIAVAATKLQCAEILIEAGTDVNAKDKWNWTPLFLATR------EQS---VEMVKLLLSNGANPQAMDDDKDTALSSPIYARSVVENTVLVKVYAELVSAGGD-------MDFPNNDGRTPIMKTIRANKPGMFRALWLNGAGLDLIDLHGQSVLHLAGMY 805
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: ankyrin-1-like (n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D62C1) HSP 1 Score: 68.6 bits (166), Expect = 1.020e-9 Identity = 40/102 (39.22%), Postives = 62/102 (60.78%), Query Frame = 1
Query: 124 GQRAIHAAIDNIHIDCFRMLLRAGTDVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGADPELRD-VDGSTALHIAASMGRAEENIVRLLLDSG 426
G+ A+H A+ N I+ +LLR G +VN + +G TPL S C E +++ VE++R+LLE GADP +D ++G TAL A G E +V++L+ +G
Sbjct: 38 GRTALHIAVKNAAIEGVELLLRYGAEVNNVDEKGITPLNSVCGDK---EVSASDLVEIVRLLLEAGADPNCKDFMEGRTALQRAMITGNVE--VVQMLIAAG 134
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: Ankyrin (repeat domain-containing protein n=2 Tax=Nocardioides guangzhouensis TaxID=2497878 RepID=A0A4Q4Z8V6_9ACTN) HSP 1 Score: 68.6 bits (166), Expect = 1.330e-9 Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 1 LAAAAGHTSVLRLLLKEGADVDATAPRD-------------------VRYSPDEQLQVAEGQRAIHAAIDNIHIDCFRMLLRAGTDVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGADPELRDVDGSTALHIAASMGRA 390
LA+AA H + ++L+ GA DA R +R+ PD L+ G +I A + H+D R + R G DVN N G+T L+ A ++G+ SA +++R+LL+ GADP + D DG TAL A S G+A
Sbjct: 338 LASAADHLAAAQVLVALGASPDAVDDRSDTPWLVTGVTGSVPMAELLLRHDPDLTLRNRYGGVSIIPASERGHVDYVRRVSRTGIDVNHINDLGWTALLEA---VILGD-GSAPYQQIVRILLDAGADPGIADQDGVTALEHARSKGQA 482
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: ankyrin (repeat domain-containing protein 16 n=1 Tax=Empidonax traillii TaxID=164674 RepID=UPI000FFCEC14) HSP 1 Score: 65.5 bits (158), Expect = 2.970e-9 Identity = 49/140 (35.00%), Postives = 68/140 (48.57%), Query Frame = 1
Query: 4 AAAAGHTSVLRLLLKE-GADVDATAPRDVRYSPDEQLQVAEGQRAIHAAIDNIHIDCFRMLLRAGTDVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGADPELRDVDGSTALHIAASMGRAEENIVRLLLD 420
AA GH VL L++E G DV+A A+ +R +H A H DC LL +G V+ +TPLM AC + + ++IR L+E GA+P LR+ DG HIA+ G E ++R LLD
Sbjct: 50 AARLGHRHVLEFLVRELGMDVEAAN--------------ADYKRPLHEAASMGHGDCVSFLLESGAGVDCLKKGDWTPLMMACTRSNL---------QVIRSLVEHGANPLLRNKDGWNCFHIASREGHPE--VLRYLLD 164
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pseudarthrobacter sp. GA104 TaxID=2676311 RepID=A0A7K1NKC4_9MICC) HSP 1 Score: 65.5 bits (158), Expect = 3.200e-9 Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 4 AAAAGHTSVLRLLLKEGADVDATAPRDVRYSPDEQLQVAEGQRAIHAAIDNIHIDCFRMLLRAGTDVNAPNSRGFTPLMSACRGALIGEENSAHCVEMIRMLLERGADPELRDVDGSTALHIAASMGRAE-ENIVR 408
A A G VL L L GADV +T RY G A+ A ++ H+D R+L+ AG VN N+ G+T A + A++ E++R+LL GADPE+RD +G TAL A +G E N++R
Sbjct: 90 AGAEGFNEVLGLTLAAGADVASTN----RY----------GGTALIPASEHGHVDTVRILIDAGVPVNHVNNLGWT----AMQEAILLNSGGPRQQEVVRLLLAAGADPEIRDPEGRTALQNAERLGFTEIANLLR 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8895.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8895.1.1 >prot_H-canaliculatus_M_contigs8895.1.1 ID=prot_H-canaliculatus_M_contigs8895.1.1|Name=mRNA_H-canaliculatus_M_contigs8895.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=254bp LAAAAGHTSVLRLLLKEGADVDATAPRDVRYSPDEQLQVAEGQRAIHAAIback to top mRNA from alignment at H-canaliculatus_M_contigs8895:3087..4076+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8895.1.1 ID=mRNA_H-canaliculatus_M_contigs8895.1.1|Name=mRNA_H-canaliculatus_M_contigs8895.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=990bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8895:3087..4076+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8895:3087..4076+ >mRNA_H-canaliculatus_M_contigs8895.1.1 ID=mRNA_H-canaliculatus_M_contigs8895.1.1|Name=mRNA_H-canaliculatus_M_contigs8895.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=762bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8895:3087..4076+ (Hapterophycus canaliculatus Oshoro7m male)back to top |