mRNA_H-canaliculatus_M_contigs8875.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF91_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 7.830e-128 Identity = 199/243 (81.89%), Postives = 223/243 (91.77%), Query Frame = 1
Query: 1 VTVSGGAPAQTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEGLPDRQHRPKWFSLYGPPLVVPTSTEIAEIALRMTGPSALTNWRSMYENLPQKASTYRGRILLSREIRENLPIGKEEVGRLPKKKEPSTSRFAMRCYVSSGADVPYQASVIRMGLNFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHLQR 729
VTVSGGAPAQTK KSMYG+RSSMAP WRTQLWVPVSIP MSGSVKT+VKDWDS+ EDETVA VNCKLK+IEGLPDR+H P+WF LYG PLV+PTST+IAEIA RM A TNWR++Y+NLPQK STYRGR+LLSREIRE+LPIG+EE GRLPKKKEPST+R AMRCYV++GAD+P QASVIRMGLNF+MSV+ISIGS VLETR VENA+GVCEWGELLESKEP+VLPSDP+Q+PDAIVHLQR
Sbjct: 513 VTVSGGAPAQTKTKSMYGTRSSMAPNWRTQLWVPVSIPSMSGSVKTVVKDWDSMTEDETVASVNCKLKEIEGLPDRRHGPRWFPLYGAPLVIPTSTDIAEIAKRMAAGEATTNWRTLYDNLPQKGSTYRGRLLLSREIRESLPIGREEGGRLPKKKEPSTTRVAMRCYVATGADIPCQASVIRMGLNFRMSVRISIGSEVLETRAVENASGVCEWGELLESKEPVVLPSDPDQMPDAIVHLQR 755
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 1.050e-121 Identity = 195/247 (78.95%), Postives = 220/247 (89.07%), Query Frame = 1
Query: 10 SGGAPAQTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEGLPDRQHRPKWFSLYGPPLVVPTSTEIAEIALRMTGPSALTNWRSMYENLPQKASTYRGRILLSREIRENLPIGKEE-------VGRLPKKKEPSTSRFAMRCYVSSGADVPYQASVIRMGLNFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHLQR 729
SGGAPAQTK KSMYG+RSSMAP WRTQLWVPVSIP MSGSVKT+VKD DS+ EDETVA VNCKLK+IEGLPDR+H P+WF LYG PLV+PTST+IA+IA RMT A TNWR++Y+NLPQK STYRGR+LLSREIRE+LP G+EE VGRLPK+KEPSTSR AMRCYV++GAD+P QASVIRMGLNF+MSV+ISIGS VLETR VENA+GVCEWGELLESKEP+VLPSDP+Q+PDAIVHLQR
Sbjct: 655 SGGAPAQTKTKSMYGTRSSMAPNWRTQLWVPVSIPSMSGSVKTVVKDRDSMTEDETVASVNCKLKEIEGLPDRRHGPRWFPLYGAPLVIPTSTDIADIAKRMTASEATTNWRTLYDNLPQKGSTYRGRLLLSREIRESLPKGREESTPWRRKVGRLPKRKEPSTSRVAMRCYVATGADIPCQASVIRMGLNFRMSVRISIGSEVLETRAVENASGVCEWGELLESKEPVVLPSDPDQMPDAIVHLQR 901
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z1_9PHAE) HSP 1 Score: 169 bits (428), Expect = 2.260e-44 Identity = 100/251 (39.84%), Postives = 143/251 (56.97%), Query Frame = 1
Query: 1 VTVSGGAPAQTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEG-LPDRQHRP--KWFSLYGPPLVVPTSTEIAEIALRMT--GPSALTNWRSMYENLPQKASTYRGRILLSREIRENLPIG--KEEVGRLPKKKEPST---SRFAMRCYVSSGADVPYQASVIRMGLNFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHL 723
V V+GG P +TK ++ G R + P WR++LW PV+ P MSG+VK + DWD VGE+E V KL+ IE + + + R +W +LYGPPL +P + + + R G A T+ Y N P KASTYRGR+L+ I + P K++V K K P+ +++AMR +V +G +P V G N KM +++S+G L T V+N GVCEW + L+ K L +DP+Q PD IVHL
Sbjct: 952 VEVAGGKPIRTKKVTLTGDRHRLNPEWRSELWQPVTTPCMSGNVKFSIWDWDPVGENELVGVYYGKLRHIENTMKETKGRVTCRWVNLYGPPLHIPETRNLKVLTRRAATLGLGAQTDHLHQYLNFPDKASTYRGRVLVMERIVPHAPKAHEKDKVAWRRKIKSPTVPKAAQYAMRIFVGAGTGIPQFTDVANFGKNKKMWIRVSVGRYELSTEPVDNNKGVCEWYQSLQQKSNFNLTADPDQCPDLIVHL 1202
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSY6_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.630e-31 Identity = 85/253 (33.60%), Postives = 131/253 (51.78%), Query Frame = 1
Query: 22 PAQTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEGLPDRQHRPKWFSLYGPPLVVPTSTEIAEIALRMTGPSALTNWRSMYENLPQKASTYRGRILLSREI--RENLP---------IG----KEEVGRLPKKKEPSTSRFAMRCYVSSGADVPYQAS--VIRMGLNFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHLQR 729
P +TK K++ G R +AP WRT+LW+P+++P + +VK V D+++ G ++ VA + I LP R P W +LYG L T I++ LR TNW Y N P ASTY+GRIL+ + + R+ LP +G K +V R +K EP R+ + C G+++P +S + +G N +M + +S G ++ N NG EW + L+S E P D +Q PD V+L +
Sbjct: 616 PLRTKTKTVKGDRDKLAPEWRTELWIPITVPTGTQTVKYTVYDYNTAGPNQLVATFYTRFGLIAKLPGRHRPPHWCNLYGAALG--TGASISDFGLRYG-----TNWTQHYNNFPDHASTYKGRILVEQHVYNRDQLPEKYRSGNHAVGINPFKRKVKRKDRKHEPPKQRYRLECIAICGSELPTFSSRNIHNIGGNSRMQLMVSWGRYSTISQSKPNNNGATEWFQHLDSIEE-EYPHDVDQCPDVFVYLSK 860
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D049_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.020e-30 Identity = 85/253 (33.60%), Postives = 136/253 (53.75%), Query Frame = 1
Query: 22 PAQTKAKSMYG-SRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEGLPDRQHRPKWFSLYGPPLVVPTSTEIAEIALRMTGPSALTNWRSMYENLPQKASTYRGRILLSREIREN--LPIGKEEVGRLPKKKEPSTSRFAMRCY---------VSSGADVPYQASVIRMGL----NFKMSVKISIGSAVLETRLVENANGVCEWGEL-LESKEPLVLPSDPEQIPDAIVHLQR 729
P +T+A+++ G R+ ++PV+ QLW+PV++P + ++K KDW+++G + VA K +I+ LP ++ P W LYG + +P + ++A MT NW Y P ASTYRGR+L+++EI E P KE P +++ S A+ + V SG +P +ASV L N KM VK+S G L+T+ VEN G+ W ++ + E + P+D +Q+PD +HL R
Sbjct: 451 PIRTRAQTVKGVDRAQLSPVFNYQLWIPVTVPTSTQTIKGECKDWEALGSADLVATNYFKWGEIDNLPGKKRGPFWQPLYGAAINIPHTIKLAIDTENMTKD---INWFKYYNKFPDLASTYRGRVLMTQEIIEKSKAPNRKEVSEVRPFRRKISGKNVAIPPFREDLVLGFLVISGTMLPQRASVSVSNLLNQKNQKMQVKVSCGRYELQTKRVENEQGISNWNQMESNADEHMTYPTDIDQVPDIFIHLCR 700
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 125 bits (314), Expect = 4.140e-29 Identity = 76/202 (37.62%), Postives = 112/202 (55.45%), Query Frame = 1
Query: 148 DWDSVGEDETVACVNCKLKDIEG-LPDRQHRP--KWFSLYGPPLVVPTSTEIAEIALRMT--GPSALTNWRSMYENLPQKASTYRGRILLSREIRENLPIG--KEEVGRLPKKKEPST---SRFAMRCYVSSGADVPYQASVIRMGLNFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHL 723
DWD VGE++ V KL+ IE + + + R +W +LYGPPL +P + + + R G A T+ Y N P KASTYRGR+L+ I + P K++V K K P+ +++AMR ++ +G ++P V G N KM +++S+G L T V+N GVCEW + L+ K L +DP+Q PD IVHL
Sbjct: 872 DWDPVGENDLVGVYYGKLRHIENVMKETKGRVTCRWVNLYGPPLHIPETRNLKVLTRRAATLGLGAQTDHLHQYLNFPDKASTYRGRVLVMERIVPHAPKAHEKDKVAWRRKIKSPAVPKAAQYAMRIFIGAGTEIPQFTDVTNFGKNKKMWIRVSVGRYELSTEPVDNNKGVCEWYQSLQLKSNFNLTADPDQCPDLIVHL 1073
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD61_SAPPC) HSP 1 Score: 117 bits (294), Expect = 1.870e-26 Identity = 83/240 (34.58%), Postives = 123/240 (51.25%), Query Frame = 1
Query: 28 QTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEGLPDR--QHRPKWFSLYGPPLVVPTSTEIAEIALRMTGPSALTNWRSMYENLPQKASTYRGRILLSREIRENLPIGKEEVGR------LPKKKEPSTSRFAMRCYVSSGADVPYQASVIRMGLNFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHL 723
+T+ K+ G R + P + +LW+ + P ++ ++ VKDWD +G+DE VA L+ I+ L + P W +LYG PL E A+ L +A + P AS YRGRIL++ EIR N + EEV R LPK P TS + +R +V SG D+P Q + + + +M + I+ G L N G+ W +L E+ + LV PSDP+QIPD V+L
Sbjct: 565 RTRVKTKSGERHLLNPAFNDELWMVLREPGLANNITLCVKDWDKIGKDEVVAHAYQSLRLIKKLLAKTGSASPMWLNLYGAPL------EGAKTNLL----NASETVEAQMNKFPDTASFYRGRILVTFEIRSN-DLKLEEVNRRVKATPLPKSLYPPTSVYRIRAFVGSGTDIP-QLTSMNIAKKSRMQIVITCGLQELAFERQRNEKGLVVWNQLCET-DNLVFPSDPDQIPDVFVYL 791
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTA9_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.550e-26 Identity = 82/251 (32.67%), Postives = 125/251 (49.80%), Query Frame = 1
Query: 4 TVSGGAPAQTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEGL----PDRQHRPKWFSLYGPPLVVPTSTEIAEIALRMTGPSALTNWRSMYENLPQKASTYRGRILLSREIRENLPIGKEEVGR------LPKKKEPSTSRFAMRCYVSSGADVPYQASVIRMGL-NFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHL 723
+++G +T+ K+ G R+ + P + +LW+ + P ++ V VKDWD +G DE VA L+ I + + P W +LYG PL +S E +S P S YRGRIL++ +IR N EEV + LPK+ P T+ + +R +V +G D+P AS+ G N KM + I+ G LE +N G+ W +L+ES + L+LP+D QIPD V+L
Sbjct: 571 SLAGNKSIRTRVKTKKGERNQLCPAFNDELWIVLREPSLANKVTLAVKDWDRIGSDEVVAHSYQSLRLIRKMCAASASGTYGPMWINLYGAPLNFTSSVIPGE-----------NTAKSEMNTFPDLGSYYRGRILVTFDIRPN-DRSLEEVNQRVKATPLPKQLYPPTAAYRLRAFVGTGTDIPQMASLSGAGTRNSKMQILITCGLNELEFERRDNNKGLVVWNQLVES-DLLILPADVTQIPDIFVYL 808
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Uncharacterized (protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKQ4_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.460e-26 Identity = 83/250 (33.20%), Postives = 126/250 (50.40%), Query Frame = 1
Query: 4 TVSGGAPAQTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEGLPDRQ----HRPKWFSLYGPPLVVPTSTEIAEIALRMTGPSALTNWRSMYENLPQKASTYRGRILLSREIRENLPIGKEEVGR-----LPKKKEPSTSRFAMRCYVSSGADVPYQASVIRMGL-NFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHL 723
+++G A +T+ KS G R + P + +LWV + P ++ V VKDWD +G DE VA L+ I + + P W +LYG PL +S + G + +++ P AS YRGRIL++ +IR N E R LP+ P T+ + +R +V +G D+P +S+ G N KM + I+IG L +N G+ W +LLES + L+LP+D QIPD V+L
Sbjct: 586 SLAGNASIRTRVKSKKGERYQLCPAFNDELWVVLREPSLANKVTIAVKDWDRIGSDEVVAHSYQSLRLIRKMCTASSTGAYGPMWLNLYGAPLTFTSSV--------IPGENTAKGEMNLF---PDLASYYRGRILVTFDIRPNERHLDEVNQRIKSTPLPRTLFPPTAAYKLRAFVGTGTDIPQMSSLSGAGTRNSKMQILITIGLYELAFERKDNVKGLVVWNQLLES-DLLILPADATQIPDIFVYL 823
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGD1_9STRA) HSP 1 Score: 116 bits (291), Expect = 4.830e-26 Identity = 83/240 (34.58%), Postives = 124/240 (51.67%), Query Frame = 1
Query: 28 QTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDWDSVGEDETVACVNCKLKDIEGLPDRQHR--PKWFSLYGPPLVVPTSTEIAEIALRMTGPSALTNWRSMYENLPQKASTYRGRILLSREIRENLPIGKEEVGR------LPKKKEPSTSRFAMRCYVSSGADVPYQASVIRMGLNFKMSVKISIGSAVLETRLVENANGVCEWGELLESKEPLVLPSDPEQIPDAIVHL 723
+T+ K+ G R + P + +LW+ + P ++ ++ VKDWD +G+DE VA L+ I+ L ++ P+W +LYG P I + + G S S P AS +RGRIL++ EIR N EE R LPK P TS + +R +V +G+D+P Q + + + +M + IS GS L +N G+ W EL ES + LV PSDP+QIPD V+L
Sbjct: 567 RTRVKTKKGERHLLNPAFNDELWMVLREPGLANNITIAVKDWDKLGKDEVVAHSYQSLRLIKKLIEKSGSASPQWLNLYGAP--------IDGVKGNILGSSESVE--SQMNKYPDTASFFRGRILVTFEIRAN-DANLEECNRRVKATPLPKTLYPPTSVYRIRAFVGTGSDIP-QITSLNIAKKSRMQIIISCGSQNLLFERQQNNKGLVVWNELKES-DNLVFPSDPDQIPDVFVYL 793 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8875.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8875.1.1 >prot_H-canaliculatus_M_contigs8875.1.1 ID=prot_H-canaliculatus_M_contigs8875.1.1|Name=mRNA_H-canaliculatus_M_contigs8875.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=243bp VTVSGGAPAQTKAKSMYGSRSSMAPVWRTQLWVPVSIPYMSGSVKTIVKDback to top mRNA from alignment at H-canaliculatus_M_contigs8875:359..3256- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8875.1.1 ID=mRNA_H-canaliculatus_M_contigs8875.1.1|Name=mRNA_H-canaliculatus_M_contigs8875.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2898bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8875:359..3256- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8875:359..3256- >mRNA_H-canaliculatus_M_contigs8875.1.1 ID=mRNA_H-canaliculatus_M_contigs8875.1.1|Name=mRNA_H-canaliculatus_M_contigs8875.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=729bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8875:359..3256- (Hapterophycus canaliculatus Oshoro7m male)back to top |