prot_H-canaliculatus_M_contigs8871.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8871.1.1
Unique Nameprot_H-canaliculatus_M_contigs8871.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length145
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.320e-58
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0
Query:   12 GRGNFKYTQGVRNQQPGAPNMPPXXXXXXXXXXXXXXXXS---MPGPVPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQEVN 144
            GRGNFKYTQGVRNQQPGAPNMPP XXXXXXXXXXXX       MP P PQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESP++L+AKINEALQVLSEHQQE N
Sbjct:  553 GRGNFKYTQGVRNQQPGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQENN 688          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD)

HSP 1 Score: 131 bits (330), Expect = 6.320e-33
Identity = 83/139 (59.71%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    6 QGPGGPGRGNFKYTQGVRNQQPG----APNMPPXXXXXXXXXXXXXXXXSMPGPVPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 140
            QGPG   R NFKYT  VRNQ P     AP  PP                    PV    P   E L++AALAAA P+ QKNMIGERLYPLI+  QP LAGKITGMLLEMDNGELLHLLESPEAL AKI EA+QVL  HQ
Sbjct:  512 QGPGAVNRRNFKYTANVRNQPPREGAPAPGAPPA------------------APVQVGGP---EPLTSAALAAASPDVQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQ 629          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 129 bits (325), Expect = 3.070e-32
Identity = 90/167 (53.89%), Postives = 96/167 (57.49%), Query Frame = 0
Query:    1 MPQQPQG----------PGGPGRG------NFKYTQGVRNQQ------PGAPNMPPXXXXXXXXXXXXXXXXSMPGPVPQAAPATN-----ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 140
            MP QP+G          P GP  G      NFKYT  VRNQ       PGAP                      PG +P AAP        E L++AALAAA PE QKNMIGERLYPLI+  QP LAGKITGMLLEMDNGELLHLLESPEAL AKI EA+QVL  HQ
Sbjct:  481 MPMQPRGQPRGRRQGPGPAGPQAGAPVNRRNFKYTANVRNQPRPEGVAPGAP---------------------APGVMPPAAPVQPGVPHLEPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQ 626          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.270e-31
Identity = 96/140 (68.57%), Postives = 102/140 (72.86%), Query Frame = 0
Query:    2 PQQPQGPGGPGRGNFKYTQGVRNQ--QPGAPNMPPXXXXXXXXXXXXXXXXSMPGPVPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEH 139
            PQQ Q  G P +GNFKYTQ VRN   Q  AP M   XXXXXXXXXXXXXX +             ESL+A ALAAA PE QKNMIGERLYPLI+E QP LAGKITGMLLEMDNGELLHLLESP++L AKI EALQVL  H
Sbjct:  541 PQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQA-------------ESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE)

HSP 1 Score: 125 bits (315), Expect = 7.500e-31
Identity = 80/131 (61.07%), Postives = 84/131 (64.12%), Query Frame = 0
Query:   13 RGNFKYTQGVRNQQPGAPNMPPXXXXXXXXXXXXXXXXSMPGPVPQAAPATN---ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 140
            R NFKYT   RN    A  MPP                   G +P AAP  N   E L++AALAAA PE QKNMIGERLYPLI+  QP LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL  HQ
Sbjct:  521 RRNFKYTANARNHP--AREMPPQ------------------GVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAHQ 631          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: A0A7R9W8W3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8W3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.150e-30
Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 0
Query:   64 NESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEH 139
            NE+L+A+ALA+A PE QKNMIGERLYPLI+  QP LAGKITGMLLEMDN ELLHLLESP+AL+AKI EALQVL  H
Sbjct:   36 NEALTASALASATPEMQKNMIGERLYPLIHHSQPDLAGKITGMLLEMDNSELLHLLESPDALNAKIQEALQVLEAH 111          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: A0A7R9U8R0_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8R0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.320e-30
Identity = 62/83 (74.70%), Postives = 69/83 (83.13%), Query Frame = 0
Query:   60 APATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQE 142
            AP    +L+ +ALAAA P +QKNMIGERLYPLI   QP LAGKITGMLLEMDN ELLHLLESP+AL AKINEALQVL +HQQ+
Sbjct:   45 APPVEAALTPSALAAASPTQQKNMIGERLYPLIMGTQPQLAGKITGMLLEMDNSELLHLLESPDALQAKINEALQVLEKHQQQ 127          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: A0A6U3DAI6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3DAI6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.130e-30
Identity = 79/135 (58.52%), Postives = 89/135 (65.93%), Query Frame = 0
Query:    9 GGPGRGNFKYTQGVRNQQPGAPNMPPXXXXXXXXXXXXXXXXSMPGPVPQAAPAT---NESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 140
            GGPG    K+ Q  RN     P+ PP                S P   PQAAPA      +L+A+ALA+A PE QKNMIGERLYPLI++ QP LAGKITGMLLEMDN ELLHLLESPEAL+AKI+EALQVL  HQ
Sbjct:  577 GGPGFQPIKFNQQARNAGGPMPSQPPQQ--------------SAP---PQAAPAPMPHEGALTASALASATPEMQKNMIGERLYPLIHQSQPDLAGKITGMLLEMDNSELLHLLESPEALNAKISEALQVLEAHQ 694          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA)

HSP 1 Score: 124 bits (310), Expect = 4.080e-30
Identity = 79/131 (60.31%), Postives = 84/131 (64.12%), Query Frame = 0
Query:   13 RGNFKYTQGVRNQQPGAPNMPPXXXXXXXXXXXXXXXXSMPGPVPQAAPATN---ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 140
            R NFKYT   RN    A + PP                   G +P AAP  N   E L++AALAAA PE QKNMIGERLYPLI+  QP LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL  HQ
Sbjct:  562 RRNFKYTANARNHP--ARDAPPQ------------------GVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAHQ 672          
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Match: G4ZHX5_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZHX5_PHYSP)

HSP 1 Score: 119 bits (299), Expect = 4.870e-30
Identity = 68/90 (75.56%), Postives = 73/90 (81.11%), Query Frame = 0
Query:   54 GPVPQAAPATN---ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 140
            G +P AAP  N   E L++AALAAA PE QKNMIGERLYPLI+  QP LAGKITGMLLEMDNGELLHLLESPEAL AKI+EAL VL  HQ
Sbjct:  227 GVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKISEALAVLEAHQ 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8871.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI2.320e-5889.71Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
K3X8Z0_GLOUD6.320e-3359.71Polyadenylate-binding protein n=2 Tax=Pythiaceae T... [more]
A0A2D4BDJ5_PYTIN3.070e-3253.89Polyadenylate-binding protein n=2 Tax=Pythium TaxI... [more]
A0A835YVH9_9STRA1.270e-3168.57Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
M4B4S0_HYAAE7.500e-3161.07Polyadenylate-binding protein n=19 Tax=Peronospora... [more]
A0A7R9W8W3_9STRA1.150e-3078.95Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7R9U8R0_9STRA2.320e-3074.70Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A6U3DAI6_9STRA3.130e-3058.52Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A6A3LR95_9STRA4.080e-3060.31Polyadenylate-binding protein n=5 Tax=Phytophthora... [more]
G4ZHX5_PHYSP4.870e-3075.56Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinSMARTSM00517poly_2coord: 76..139
e-value: 2.7E-36
score: 136.6
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPFAMPF00658PABPcoord: 72..136
e-value: 4.4E-30
score: 103.5
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPROSITEPS51309PABCcoord: 64..141
score: 21.670284
NoneNo IPR availableGENE3D1.10.1900.10coord: 61..144
e-value: 4.6E-34
score: 118.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..84
NoneNo IPR availablePANTHERPTHR24012:SF805POLYADENYLATE-BINDING PROTEINcoord: 29..138
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 29..138
IPR036053PABC (PABP) domainSUPERFAMILY63570PABC (PABP) domaincoord: 2..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8871contigH-canaliculatus_M_contigs8871:3145..4803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8871.1.1mRNA_H-canaliculatus_M_contigs8871.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8871 2453..4836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8871.1.1 ID=prot_H-canaliculatus_M_contigs8871.1.1|Name=mRNA_H-canaliculatus_M_contigs8871.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=145bp
MPQQPQGPGGPGRGNFKYTQGVRNQQPGAPNMPPQQQQQQQQQQSAPQQQ
SMPGPVPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALA
GKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQEVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036053PABP-dom
IPR002004PABP_HYD