prot_H-canaliculatus_M_contigs887.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs887.1.1
Unique Nameprot_H-canaliculatus_M_contigs887.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length204
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs887.1.1 vs. uniprot
Match: D8LDM5_ECTSI (UCH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM5_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 8.760e-64
Identity = 109/205 (53.17%), Postives = 139/205 (67.80%), Query Frame = 0 
Query:    1 MQNKNNHCFLLSAIQFIRALPTCHSRLLNFSGAASPTAPKGKELTWAVSRTLRALQDDGTSDMGKKEPLVPHELIKTFFTVL-GALFVDGDQDDMANTVGAILDQIHDETYNKESDSSLVDSARGSCTSHYFCRKCKVRQEASDGSTHLTYPKTETLTTVEEWTRIPPELVLSVARFERTSHGHHKKRKDKLAVDLSLNNAVTFG 204
            M N+ N CFLLSAIQ IRALP CH+ +LNF  A     P+GKELTWAVSRT+RALQ+ G    G   PL P ELI TFF V  G +  DG+QDD+ANT+G ILD++H ET + ES SSLVDSARG   +  FC+ C    E +  +   ++ K E + + E+W+ IPPEL++SV RF+RT  G + K KDK+AVDL L+  V+FG
Sbjct:   43 MINRENDCFLLSAIQMIRALPICHAAILNFPDATELAPPRGKELTWAVSRTMRALQESG----GTASPLNPTELIGTFFNVFSGNMVQDGEQDDLANTIGTILDKVHSETVDAESQSSLVDSARGQMETRTFCQMCHA--EKNKRTPRTSFSKNEVMLSKEKWSVIPPELIVSVGRFQRTLCGGYIKAKDKVAVDLLLDKTVSFG 241
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs887.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDM5_ECTSI8.760e-6453.17UCH domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 1..164
e-value: 1.5E-12
score: 49.0
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 2..198
e-value: 1.6E-8
score: 34.4
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..204
score: 10.476785
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 1..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs887contigH-canaliculatus_M_contigs887:1790..8787 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs887.1.1mRNA_H-canaliculatus_M_contigs887.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs887 1790..8814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs887.1.1 ID=prot_H-canaliculatus_M_contigs887.1.1|Name=mRNA_H-canaliculatus_M_contigs887.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=204bp
MQNKNNHCFLLSAIQFIRALPTCHSRLLNFSGAASPTAPKGKELTWAVSR
TLRALQDDGTSDMGKKEPLVPHELIKTFFTVLGALFVDGDQDDMANTVGA
ILDQIHDETYNKESDSSLVDSARGSCTSHYFCRKCKVRQEASDGSTHLTY
PKTETLTTVEEWTRIPPELVLSVARFERTSHGHHKKRKDKLAVDLSLNNA
VTFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf
IPR028889USP_dom
IPR001394Peptidase_C19_UCH