mRNA_H-canaliculatus_M_contigs8807.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDJ2_9PHAE) HSP 1 Score: 379 bits (973), Expect = 3.680e-130 Identity = 178/194 (91.75%), Postives = 190/194 (97.94%), Query Frame = 1
Query: 1 AKPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRDIYPMDFYAKGSGAWTNMHEKRVS 582
AKPLSPGEVLGCT+PVIEGKDALVFVADGRFHLESA+IHNPGM+HFRY+PYTKVLTREQYDTPKMH +RK AI+VAR AKSFGVILGTLGRQGNPHIL+HL S+LRA+GKQ+FVLLLSEVFPAKLAAFA+VEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRD+YPMDFYAKGSGAWTNMHEKRVS
Sbjct: 181 AKPLSPGEVLGCTSPVIEGKDALVFVADGRFHLESAMIHNPGMQHFRYNPYTKVLTREQYDTPKMHDIRKQAIEVARGAKSFGVILGTLGRQGNPHILDHLMSILRARGKQFFVLLLSEVFPAKLAAFADVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRDVYPMDFYAKGSGAWTNMHEKRVS 374
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHS6_9STRA) HSP 1 Score: 300 bits (768), Expect = 1.260e-98 Identity = 141/187 (75.40%), Postives = 160/187 (85.56%), Query Frame = 1
Query: 1 AKPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRDIYPMDFYAKGSGAWTN 561
AKPLSPGEVLGCT+P I+GK ALVFVADGRFHLESA+I NP MEH RYDPY+KVL+RE YDT KM LR+ AID AR A +FGVILGTLGRQGNPHIL+ L S+L GK++FV+LLSE+FPAKLAA V+AWIQVACPRLS+DWGHFFDKPLLSPYEA+V L ET WR +YPMDFYAK G+W+N
Sbjct: 214 AKPLSPGEVLGCTSPAIDGKTALVFVADGRFHLESAMIQNPHMEHLRYDPYSKVLSREGYDTDKMRALRRAAIDRARGATAFGVILGTLGRQGNPHILDRLLSILTKHGKRHFVMLLSEIFPAKLAAVRGVDAWIQVACPRLSIDWGHFFDKPLLSPYEAEVCLGETDWRAVYPMDFYAKSGGSWSN 400
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNB6_HYAAE) HSP 1 Score: 282 bits (721), Expect = 2.040e-94 Identity = 130/192 (67.71%), Postives = 159/192 (82.81%), Query Frame = 1
Query: 4 KPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRD-IYPMDFYAKGSGAWTNMHEKR 576
KPLSPGEVLGCT+PVIEG DALVF+ADGRFHLESA+I NP ++ +RYDPY K+LT E+YD P+M +R+ AID AR AK+FGV+LGTLGRQGNP IL+H+ +L GK YFVLL+SE+FP KLA F +V+AWIQ+ACPRLS+DWG+ F KPLL+ YEA+V E T WR+ YPMDFYAKGSG WTN H+++
Sbjct: 7 KPLSPGEVLGCTSPVIEGADALVFIADGRFHLESAMIMNPNLKAYRYDPYPKLLTLEKYDLPQMMAIRRAAIDEARGAKNFGVVLGTLGRQGNPLILDHVKQLLEQSGKTYFVLLMSELFPDKLARFKDVDAWIQIACPRLSIDWGYAFPKPLLTAYEAEVCFERTRWREGSYPMDFYAKGSGPWTNYHDRK 198
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G581_9STRA) HSP 1 Score: 285 bits (728), Expect = 2.820e-92 Identity = 134/189 (70.90%), Postives = 156/189 (82.54%), Query Frame = 1
Query: 4 KPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRDIYPMDFYAKGSGAWTNMHE 570
KPLSPGEVLGCT+P + G +A VFVADGRFHLESA+I NPG++ +RYDPY KVLTRE+YDTP+M +RK AID A A+ FGVILGTLGRQGNP +L L + L A+GKQ+FV+LLSEVFPAKLA F EV+AWIQVACPRLS+DWG F KPLLSPYEA VAL + WR +YPMDFYA GSG W+N H+
Sbjct: 213 KPLSPGEVLGCTSPSLAGYEAYVFVADGRFHLESAMIANPGVDAYRYDPYPKVLTRERYDTPRMQAVRKAAIDTAAGARRFGVILGTLGRQGNPEVLRRLEASLAARGKQWFVMLLSEVFPAKLALFEEVDAWIQVACPRLSIDWGAAFAKPLLSPYEAFVALGDAEWRSVYPMDFYAAGSGPWSNYHK 401
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFS0_PHYIN) HSP 1 Score: 279 bits (713), Expect = 9.270e-92 Identity = 129/192 (67.19%), Postives = 160/192 (83.33%), Query Frame = 1
Query: 4 KPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRD-IYPMDFYAKGSGAWTNMHEKR 576
KPLSPGEVLGCT+PVIEG DALVF+ADGRFHLESA+I NP ++ +RYDPY K+LT E+YD P+M +R+ AID A+ AK FGV+LGTLG QGNP IL+H+ +L GK+YFVLLLSE+FP KLA F +V+AWIQ+ACPRLS+DWG+ F KPLL+ YEA+V LE+T W++ YPMDFYAKGSG WTN H+++
Sbjct: 101 KPLSPGEVLGCTSPVIEGVDALVFIADGRFHLESAMIMNPKLKAYRYDPYPKMLTIEKYDLPQMMEIRRAAIDKAKGAKKFGVVLGTLGHQGNPLILDHVKELLEQSGKEYFVLLLSELFPDKLARFKDVDAWIQIACPRLSIDWGYAFPKPLLTAYEAEVCLEKTQWKEGSYPMDFYAKGSGPWTNYHDRK 292
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MRI0_9STRA) HSP 1 Score: 281 bits (719), Expect = 8.640e-91 Identity = 127/192 (66.15%), Postives = 161/192 (83.85%), Query Frame = 1
Query: 4 KPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRD-IYPMDFYAKGSGAWTNMHEKR 576
KPLSPGEVLGCT+PVIEG DALVF+ADGRFHLES +I NP ++ +RYDPY K+LT E+YD P+M G+R+ AID A+ AK FG++LGTLGRQGNP IL+H+ +L GK+YFVLLLSE+FP KLA F +V+AW+Q+ACPRLS+DWG+ F KPLL+ YEA+V L++T W++ YPMDFYAKGSG WTN H+++
Sbjct: 241 KPLSPGEVLGCTSPVIEGVDALVFIADGRFHLESVMIMNPKLKAYRYDPYPKMLTIEKYDLPQMMGIRRAAIDKAKAAKKFGIVLGTLGRQGNPLILDHVKQMLEQNGKEYFVLLLSELFPDKLARFEDVDAWVQIACPRLSIDWGYAFPKPLLTAYEAEVCLDQTQWKEGSYPMDFYAKGSGPWTNYHDRK 432
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU80_SAPPC) HSP 1 Score: 279 bits (714), Expect = 3.460e-90 Identity = 130/190 (68.42%), Postives = 159/190 (83.68%), Query Frame = 1
Query: 1 AKPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRDIYPMDFYAKGSGAWTNMHE 570
AKPLSPGEVLGCT+P+ +DALVFVADGRFHLESA+I NP ++ +RYDPY KVL+ E YD +M +RK A++ A+ A++FGVILGTLGRQG+ IL+HLTSVL A GK++F LLLSE+FP KLA F EV+AWIQVACPRLS+DWG+ F+KPLLSPYEA+V L ET W++ YPMDFYAKGSG WTN ++
Sbjct: 232 AKPLSPGEVLGCTSPLFPDRDALVFVADGRFHLESAMIANPSVKAYRYDPYPKVLSCESYDLGQMVAIRKSAVETAKSAQTFGVILGTLGRQGSTVILDHLTSVLDAHGKRHFTLLLSEIFPEKLAMFKEVDAWIQVACPRLSIDWGYAFNKPLLSPYEAEVCLNETPWQEAYPMDFYAKGSGKWTNYYK 421
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=22 Tax=Phytophthora TaxID=4783 RepID=G4Z0Q5_PHYSP) HSP 1 Score: 280 bits (715), Expect = 9.960e-90 Identity = 129/192 (67.19%), Postives = 160/192 (83.33%), Query Frame = 1
Query: 4 KPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRD-IYPMDFYAKGSGAWTNMHEKR 576
KPLSPGEVLGCT+PVIEG ALVF+ADGRFHLESA+I NP ++ +RYDPY KVLT E+YD P+M +R+ AID A+ AK FG++LGTLGRQGNP IL+H+ +L GK+YFVLLLSE+FP KLA F +V+AWIQ+ACPRLS+DWG+ F KPLL+ YEA+V LE+T W++ YPMDFYAKGSG WTN H+++
Sbjct: 278 KPLSPGEVLGCTSPVIEGVGALVFIADGRFHLESAMIMNPSLKAYRYDPYPKVLTIEKYDLPQMMEVRRAAIDQAKGAKKFGIVLGTLGRQGNPLILDHVKQLLEQSGKEYFVLLLSELFPDKLARFKDVDAWIQIACPRLSIDWGYAFPKPLLTAYEAEVCLEQTQWKEGSYPMDFYAKGSGPWTNYHDRK 469
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=4 Tax=Peronosporaceae TaxID=4777 RepID=D0NJ94_PHYIT) HSP 1 Score: 279 bits (713), Expect = 1.270e-89 Identity = 129/192 (67.19%), Postives = 160/192 (83.33%), Query Frame = 1
Query: 4 KPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRD-IYPMDFYAKGSGAWTNMHEKR 576
KPLSPGEVLGCT+PVIEG DALVF+ADGRFHLESA+I NP ++ +RYDPY K+LT E+YD P+M +R+ AID A+ AK FGV+LGTLG QGNP IL+H+ +L GK+YFVLLLSE+FP KLA F +V+AWIQ+ACPRLS+DWG+ F KPLL+ YEA+V LE+T W++ YPMDFYAKGSG WTN H+++
Sbjct: 262 KPLSPGEVLGCTSPVIEGVDALVFIADGRFHLESAMIMNPKLKAYRYDPYPKMLTIEKYDLPQMMEIRRAAIDKAKGAKKFGVVLGTLGHQGNPLILDHVKELLEQSGKEYFVLLLSELFPDKLARFKDVDAWIQIACPRLSIDWGYAFPKPLLTAYEAEVCLEKTQWKEGSYPMDFYAKGSGPWTNYHDRK 453
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Match: 2-(3-amino-3-carboxypropyl)histidine (synthase subunit 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV85_9STRA) HSP 1 Score: 278 bits (710), Expect = 1.270e-89 Identity = 127/191 (66.49%), Postives = 160/191 (83.77%), Query Frame = 1
Query: 1 AKPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPYTKVLTREQYDTPKMHGLRKHAIDVARRAKSFGVILGTLGRQGNPHILEHLTSVLRAQGKQYFVLLLSEVFPAKLAAFAEVEAWIQVACPRLSVDWGHFFDKPLLSPYEADVALEETAWRDIYPMDFYAKGSGAWTNMHEK 573
AKPLSPGEVLGCT+P ++ALVFVADGRFHLESA+I NP ++ +RYDPY KVL+ E YD P+M +RK A++ A+ A++FG+I+GTLGRQG+P IL+H+TS++ QGK+YF LLLSE+FP KLA F EV+AWIQVACPRLS+DWG+ F KPLL+ YEA+V L ETAW++ YPMDFYAKGSG WTN ++K
Sbjct: 233 AKPLSPGEVLGCTSPQFPDREALVFVADGRFHLESAMIANPTVKAYRYDPYPKVLSCESYDLPQMVSIRKEAVERAKSAQTFGIIMGTLGRQGSPVILDHITSLVERQGKKYFTLLLSEIFPDKLAMFREVDAWIQVACPRLSIDWGYAFTKPLLTAYEAEVCLAETAWQESYPMDFYAKGSGPWTNYYKK 423 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8807.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8807.2.1 >prot_H-canaliculatus_M_contigs8807.2.1 ID=prot_H-canaliculatus_M_contigs8807.2.1|Name=mRNA_H-canaliculatus_M_contigs8807.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=195bp AKPLSPGEVLGCTAPVIEGKDALVFVADGRFHLESAIIHNPGMEHFRYDPback to top mRNA from alignment at H-canaliculatus_M_contigs8807:2817..4896- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8807.2.1 ID=mRNA_H-canaliculatus_M_contigs8807.2.1|Name=mRNA_H-canaliculatus_M_contigs8807.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2080bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8807:2817..4896- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8807:2817..4896- >mRNA_H-canaliculatus_M_contigs8807.2.1 ID=mRNA_H-canaliculatus_M_contigs8807.2.1|Name=mRNA_H-canaliculatus_M_contigs8807.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=585bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8807:2817..4896- (Hapterophycus canaliculatus Oshoro7m male)back to top |