mRNA_H-canaliculatus_M_contigs879.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl (mannosyltransferase, family GT58 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLD1_ECTSI) HSP 1 Score: 356 bits (914), Expect = 1.070e-119 Identity = 181/237 (76.37%), Postives = 199/237 (83.97%), Query Frame = 1
Query: 1 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLLQAKGIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQAVESFADS---ANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFSVAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWTAP 702
RWRLGCVSYSLAVGVKMNILLFAPGLLLLL+QA G+ G A+CLSICA VQLLLGAPFLL HPVAY+SRSFELGRVFKFEWTVNFKFL+E+AFVSP LSIALL LT+ L+LFA KW+ SA+ VE+F+ S A G G N LHPEYVVKTLFVSN IGIVFCRSLHYQFYSWYYHTLPFLLWQT VA+RL VLCGVE GFNVFPA+ LSS VLQVCH+ +LAG+W +P
Sbjct: 180 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLVQANGVGGAAVCLSICAGVQLLLGAPFLLHHPVAYLSRSFELGRVFKFEWTVNFKFLTEEAFVSPGLSIALLALTLAVLALFASKWLRSAREVETFSASDLRAGEGAGGATGGAVNARLHPEYVVKTLFVSNFIGIVFCRSLHYQFYSWYYHTLPFLLWQTGLPVALRLVVLCGVEVGFNVFPATALSSGVLQVCHVAILAGLWVSP 416
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUF9_HETAK) HSP 1 Score: 255 bits (651), Expect = 1.470e-81 Identity = 131/234 (55.98%), Postives = 163/234 (69.66%), Query Frame = 1
Query: 1 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLLQAKGIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQAVESFADSANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFSVAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWTAP 702
+WR G V +SLAV VKMNILLFAPGLLLL LQ++G+ GT +CLSICA +Q+LLG PFLL +PVAY+ RSFELGRVF ++WTVNFKFL+E+ FVS LS+ LL+L V ++ FA KW+ S ++ D L P Y TLF SN IGIVF R+LHYQFY WY+HTLP L W + ++LA + VE+ FNVFPA+P SS VLQ+ H+LLL +WTAP
Sbjct: 76 KWRFGSVFFSLAVSVKMNILLFAPGLLLLFLQSQGVLGTIICLSICAGIQVLLGLPFLLTYPVAYLHRSFELGRVFMYKWTVNFKFLNEETFVSKSLSVYLLLLMVMAIASFAKKWLSSVKSNSIVFQK----------KDGPSKLDPYYTTLTLFTSNFIGIVFARTLHYQFYCWYFHTLPLLAWHGRLPLVLKLAAVASVEWAFNVFPATPASSLVLQLSHVLLLGALWTAP 299
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB06_9STRA) HSP 1 Score: 237 bits (604), Expect = 1.680e-72 Identity = 129/234 (55.13%), Postives = 162/234 (69.23%), Query Frame = 1
Query: 1 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLLQAKGIAGTAL-CLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQAVESFADSANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFSVAVRLAVLCGVEFGFN-VFPASPLSSAVLQVCHILLLAGVWT 696
RWRLGCV YSLAVGVKMN+LLFAPGLLLLLLQA G A A+ C+SICA VQL++G PFL +PV YI+ +F LGRVF ++WTVN KFLSED FVS LS+ALL + V L+ FA KW+ + + S A L P+YVV T+ VSN IGIVF RSLHYQFY+WY+H +PFL + FS+ ++A+ +E+ F VFPA+ SS +LQ HI+LL+ V+T
Sbjct: 214 RWRLGCVMYSLAVGVKMNVLLFAPGLLLLLLQAYGSAAGAVGCISICALVQLVIGLPFLRTYPVQYIAGAFNLGRVFMYKWTVNLKFLSEDVFVSKPLSVALLAMHVIALAFFARKWLAGSGGPAICIKYDDRSFSSNLFGRAKSALSPDYVVTTMLVSNFIGIVFARSLHYQFYAWYFHAIPFLCQRAKFSLPAQVAIFLSMEYAFGYVFPATAASSLLLQGAHIVLLSAVYT 447
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU24_9STRA) HSP 1 Score: 233 bits (594), Expect = 2.050e-70 Identity = 129/254 (50.79%), Postives = 169/254 (66.54%), Query Frame = 1
Query: 1 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLLQA-KGIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQAVESFADSANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFS-------------------VAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWTAP 702
RW GC++YSL VGVKMN+LL APGLLLLLLQ +GIAGT CL+ CA VQL++GAPFLLQ+P Y+SR+F+ RVF F+WTVN+KFL ED FVSP LS++LL+L ++TL LFA KW+ + + A + R ++ F P Y+ TLFVSN IGIVF R+LHYQFY WY+H+LP +L+ + S VA R+ + VE FN+FPA+P SSA+LQV H+ +L ++ AP
Sbjct: 251 RWHTGCIAYSLGVGVKMNVLLSAPGLLLLLLQGQRGIAGTISCLATCAAVQLIIGAPFLLQNPTEYLSRAFQFSRVFLFKWTVNWKFLPEDMFVSPALSVSLLLLHLSTLILFASKWISATRLQTKNASALFV----RVKDNRPFS--PSYIAYTLFVSNFIGIVFARTLHYQFYVWYFHSLPLMLYIASSSSLSQKSGTNDGLILASVADVACRMTLTVVVEVAFNIFPATPSSSAMLQVAHLCILLILYQAP 498
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S5Q9_9STRA) HSP 1 Score: 231 bits (590), Expect = 2.940e-70 Identity = 126/235 (53.62%), Postives = 164/235 (69.79%), Query Frame = 1
Query: 1 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLLQAK-GIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQ-AVESFADSANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFSVAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWTA 699
+WR+GC+ YSL V +KMN+LLFAPGLLLLLLQ+ + T +CL ICA VQL+LGAPFLL PV+Y+ ++FEL RVF +EWTVN+KFL ED FVS LSI LL+ + L LFA KW+ SA+ S+ N + N L PEY+++T+F+SN IGIVF R+LHYQFYSWY++++PF+L T +L V+ +EF FN FPA SSAVLQ+ H+ LL+GV A
Sbjct: 236 KWRIGCLFYSLGVSIKMNVLLFAPGLLLLLLQSSDNLVETIICLGICAVVQLILGAPFLLTFPVSYLRKAFELDRVFFYEWTVNWKFLPEDIFVSKPLSIGLLLCHIGFLVLFAIKWLRSAKDQTGSYLFLCNNPTNTSTRNKNQ--LTPEYIIQTMFLSNFIGIVFARTLHYQFYSWYFYSVPFMLMFTLMKRHTKLMVVIMIEFAFNTFPAMAKSSAVLQMAHVTLLSGVLLA 468
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUB1_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.550e-66 Identity = 124/252 (49.21%), Postives = 163/252 (64.68%), Query Frame = 1
Query: 7 RLGCVSYSLAVGVKMNILLFAPGLLLLLLQA-KGIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQAVESFADSANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFS-------------------VAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWTAP 702
R+G V GVKMN+LL APGLLLLLLQ +GIAGT CL+ CA VQL++GAPFLLQ+P Y+SR+F+ RVF F+WTVN+KFL ED FVSP LS++LL+L ++TL LFA KW+ + + A + R ++ F P Y+ TLFVSN IGIVF R+LHYQFY WY+H+LP +L+ + S VA R+ + VE FN+FPA+P SSA+LQV H+ +L ++ AP
Sbjct: 8 RIGIVGLGGTRGVKMNVLLSAPGLLLLLLQGQRGIAGTISCLATCAAVQLIIGAPFLLQNPTEYLSRAFQFSRVFLFKWTVNWKFLPEDMFVSPALSVSLLLLHLSTLILFASKWISATRLQTKNASALFV----RVKDNRPFS--PSYIAYTLFVSNFIGIVFARTLHYQFYVWYFHSLPLMLYIASSSSLSQKSGTNDGLILASVADVACRMTLTVVVEVAFNIFPATPSSSAMLQVAHLCILLILYQAP 253
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl (mannosyltransferase, family GT58 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM4_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.670e-66 Identity = 129/282 (45.74%), Postives = 161/282 (57.09%), Query Frame = 1
Query: 1 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLL------------------------------------------------QAKGIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQAVESFADSANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFSVAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWTAP 702
RWR GC Y+LAVGVKMN+LL APGLL +A + GTALCLSICA VQ L+GAPFLL HPV+Y+ R+F+ RVF+ +TVN KFL+E AFVS LS ALL + TL+ FA KW +A A SA RA L P+YV++TL VSN IG+VF RS+HYQFY+WY+H+LP LLW T A RL +L +E FNV+P++P SSA+LQ H++LLA +W AP
Sbjct: 185 RWRGGCALYALAVGVKMNVLLAAPGLLXXXXXXXXXXXXXXXXXXXSGXDGIXXXXXXXXXXXXXXXXXXXXXXXXXSDRAAALRGTALCLSICAGVQALIGAPFLLTHPVSYVRRAFDFSRVFEHRYTVNLKFLNERAFVSRALSAALLAAMLCTLAAFAVKWTRAAAA------SARRCPKPRA-------LSPQYVLRTLLVSNFIGVVFARSMHYQFYAWYFHSLPLLLWTTQLPTAARLLLLAAIELAFNVYPSTPASSALLQAAHLVLLAALWAAP 453
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: EOG090X04XE (n=7 Tax=Daphnia TaxID=6668 RepID=E9FQN9_DAPPU) HSP 1 Score: 216 bits (549), Expect = 1.060e-64 Identity = 115/231 (49.78%), Postives = 159/231 (68.83%), Query Frame = 1
Query: 4 WRLGCVSYSLAVGVKMNILLFAPGLLLLLLQAKGIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQAVESFADSANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFSVAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWT 696
W LG +SLAV +KMNILLFAP LLL + ++G GT LSICA +QLLLGAPFLL +PVAY+ SF LGR+F FEWTVN++FLSE+ FV P I+LL+L V L++FA W + ++SFA G G + + ++ LF +N+IG+ F RSLHYQFY WY+HTLP+LLW T +S+ +RL +L +E +N FP++ +SSA+L VCH+L++ G+++
Sbjct: 197 WTLGSTFFSLAVSIKMNILLFAPALLLAYIASQGFYGTIKQLSICAGIQLLLGAPFLLTNPVAYMVGSFNLGRIFLFEWTVNWRFLSEELFVHPGFHISLLLLHVGLLAIFAKPWF---RYMKSFAKLQPTGVG----------IVSQLLLLPLFTANLIGVAFSRSLHYQFYVWYFHTLPYLLWSTPYSIWLRLCILGLIEMSWNTFPSTNVSSAMLHVCHLLIIYGIFS 414
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: hypothetical (protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F057) HSP 1 Score: 215 bits (548), Expect = 1.700e-64 Identity = 110/235 (46.81%), Postives = 161/235 (68.51%), Query Frame = 1
Query: 1 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLLQAKGIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFAFKWVGSAQAVESFADSANAGRGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNF-SVAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWTAP 702
RW +GCV +SLAVG+KMN+LLFAP LLLLLLQ G+A T L+ICA VQ+LLG PFL+++PV Y++R+FE R F ++WTVN++F+ D F+S +IALL + LSLF +KW + + N+ R S S+ +L P+Y+V +F +NI+G+ F RSLHYQFY WY+H+L FLLW V +R+ +L +E+ +NV+P++ SS +L +C++L++A + AP
Sbjct: 186 RWSIGCVFFSLAVGIKMNLLLFAPALLLLLLQTYGVAKTVPRLAICAIVQVLLGVPFLMRNPVGYVARAFEFSRQFMYKWTVNWRFVPVDVFLSKPWAIALLACHLFVLSLFVWKWCRAQGGL------LNSIRLSSPSSQPKRYLSPDYIVTLMFTANIVGMTFSRSLHYQFYLWYFHSLAFLLWHCPMLPVPLRITILGAIEYCWNVYPSTDFSSILLFICNVLIVASIMLAP 414
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Match: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol (alpha-1,3-mannosyltransferase-like n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A5239F) HSP 1 Score: 215 bits (548), Expect = 1.830e-64 Identity = 117/235 (49.79%), Postives = 161/235 (68.51%), Query Frame = 1
Query: 1 RWRLGCVSYSLAVGVKMNILLFAPGLLLLLLQAKGIAGTALCLSICATVQLLLGAPFLLQHPVAYISRSFELGRVFKFEWTVNFKFLSEDAFVSPVLSIALLVLTVTTLSLFA-FKWVGSAQAVESFADSANAG-RGSRASNDANFHLHPEYVVKTLFVSNIIGIVFCRSLHYQFYSWYYHTLPFLLWQTNFSVAVRLAVLCGVEFGFNVFPASPLSSAVLQVCHILLLAGVWTA 699
RW LG + +S AV VKMN+LL+AP LLLL+L+A I+ L L+ A VQ+LLG PFL+ HPVAYISR+F LGRVF W+VNFKF+ E F+S +I LL + L+LFA ++W + +F S R +AS+ + L E++V T+FV N IGIV RSLHYQFYSWY+H+LP+LLW+TN+S +RL + GVE +N++P+S LSS +L H+++L G+W+A
Sbjct: 187 RWHLGLIMFSGAVSVKMNVLLYAPPLLLLMLKAMDISRLLLALAGAALVQILLGLPFLVSHPVAYISRAFNLGRVFIHFWSVNFKFMPEPVFISKGFAIFLLAAHLILLTLFAHYRWCKHEGGLINFLHSRYVSMRHGKASSSSVKVLTKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFHSLPYLLWRTNYSTLMRLILFMGVEMCWNIYPSSSLSSGLLLCLHLIILWGLWSA 421 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs879.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs879.1.1 >prot_H-canaliculatus_M_contigs879.1.1 ID=prot_H-canaliculatus_M_contigs879.1.1|Name=mRNA_H-canaliculatus_M_contigs879.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=234bp RWRLGCVSYSLAVGVKMNILLFAPGLLLLLLQAKGIAGTALCLSICATVQback to top mRNA from alignment at H-canaliculatus_M_contigs879:4808..6540+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs879.1.1 ID=mRNA_H-canaliculatus_M_contigs879.1.1|Name=mRNA_H-canaliculatus_M_contigs879.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1733bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs879:4808..6540+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs879:4808..6540+ >mRNA_H-canaliculatus_M_contigs879.1.1 ID=mRNA_H-canaliculatus_M_contigs879.1.1|Name=mRNA_H-canaliculatus_M_contigs879.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=702bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs879:4808..6540+ (Hapterophycus canaliculatus Oshoro7m male)back to top |