mRNA_H-canaliculatus_M_contigs8326.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8326.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8326.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Heat (shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN52_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 4.930e-186
Identity = 315/341 (92.38%), Postives = 327/341 (95.89%), Query Frame = 1
Query:    1 RAVDPRIIRERVREREAKIAAKENKEREKRXXXXXXXXALXXXXXXXXXXXERLRAIARQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGGTGSDAGVTPVGEEDMEWLKENLLLEQLNAAISALGTEEDIKVEGLDVMKQLMERRKMELKEEEEAAEAKQRADREALVKAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE 1023
            RAVDPRIIRERVREREAKIAAKENKEREKR    XXXX  XXXXXXXXXXXERLRAI+RQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGG+GS+AGVTPVGEEDMEWLKENLLL+QLNAAISALGTEEDIKVEGLDVMK LMERRK ELKEEEEAAEAKQR DREALV AQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQ+HAAPAGPQKVVAPAV A++ ++A A+SAPERPSRREPREDVWSQ+QQQQLE ALAR+PMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE
Sbjct:  274 RAVDPRIIRERVREREAKIAAKENKEREKREREQXXXXXXXXXXXXXXXXXERLRAISRQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGGSGSEAGVTPVGEEDMEWLKENLLLDQLNAAISALGTEEDIKVEGLDVMKVLMERRKAELKEEEEAAEAKQRTDREALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAAS-SSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE 613          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDN6_HETAK)

HSP 1 Score: 136 bits (342), Expect = 2.010e-33
Identity = 109/273 (39.93%), Postives = 137/273 (50.18%), Query Frame = 1
Query:  178 QAKAGREAHKKEMRRR-KKVMKNLYSLAVAQLTVGGTGSDAGVTPVGEEDMEWLKENLLLEQLNAAISALGTEEDIKVEGLDVMKQLMERRKMELKEEEEAAEAKQRADREALVKAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVK 993
            QA   R A +KE RR  K+V   +            T  +     + E+D+E   E   L+ L+A    LG  E     GL  ++ L+ R K E + EEEA + +  A R               +   AW E ELS LAKA+ KFPAGSQNRW  IS FIA     +   SKE+CI KYQ+I  AP    K     V A A            PS R   EDVW+Q QQ  LE  L ++P  MDKNERW++ISA V GK+KKQCVERFK ++
Sbjct:    1 QAAEERAAREKEERRAAKEVRDQMXXXXXXXXXXXXTQIEEKGYDIDEDDLELFLERADLDLLSAGAEVLGGPE-----GLLAIQALLGRAKEE-RAEEEAEQQEAIARRXXXXXXXXXXXXXXXAALTAWSEEELSCLAKAVQKFPAGSQNRWLTISNFIAHMVHTER--SKEECIQKYQEIQTAPGSKPKAGGTKVAAGAXXXXXXXG----PSARASEEDVWTQDQQAALEEGLKKHPASMDKNERWSAISAGVEGKTKKQCVERFKALR 261          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4P2_PHATC)

HSP 1 Score: 117 bits (294), Expect = 1.560e-25
Identity = 68/153 (44.44%), Postives = 88/153 (57.52%), Query Frame = 1
Query:  565 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQI---HAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 1014
            W + ELS+LAKA+ K+P G  +RWE I+ F+    +  +P SKE+CI KY  +   H+ P      VA            A S PE  S  +  EDVW+  Q QQL+  LA  P  MDKNERW +I+  VPGKSKKQCV+RFK ++  L  KK
Sbjct:  433 WTKEELSALAKAVKKYPPGGSSRWEQIALFVNNLCKQDEPRSKEECIEKYNNVAKTHSKPTESTNGVA------------AASEPENSS--QSNEDVWTAEQDQQLQDGLAANPASMDKNERWTAITECVPGKSKKQCVQRFKVIRDALKKKK 571          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Subfamily (c member 2 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYH1_9STRA)

HSP 1 Score: 115 bits (289), Expect = 9.910e-25
Identity = 80/199 (40.20%), Postives = 109/199 (54.77%), Query Frame = 1
Query:  445 RKMELKEEEEAAEAKQRADREALVKAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPRE------DVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE 1023
            ++ E K EEE ++A   A   A   A+   G +   ++ AW E EL  LAKA+V+FPAG+Q RW+ I+ ++    R     SKE+CI +YQ + A  +  + V A     +   +   KS     SR E         D WSQ QQ+QLEA L  YP  M+KNERW  IS  V GKSKK+C ER+K ++   +AKKK E
Sbjct:  474 KRREAKREEETSKA---ASGLAHASAEKDGGEESSPKEAAWTEEELGVLAKAVVRFPAGTQKRWQCIADYLNHMVRGASLRSKEECIKQYQVVQAGVSKSRVVAATGGAGAGGGSEGRKSGKTGTSRGEDNGKAVASGDGWSQEQQKQLEAGLVTYPASMEKNERWKRISEGVQGKSKKECAERYKALRA-AVAKKKEE 668          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PG91_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.430e-22
Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  565 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAEKKA 1032
            W ++EL++L+KAI K+PAG   RW+ I+ FI    + ++P +KE+CI KY  I +APA    + APA                        +  W++ +   L+  L +YP  M+KNERW SI+  VPG+SKK+CVERFK ++  +   KKA   A
Sbjct:  503 WTKDELAALSKAIKKYPAGGAARWDAIASFINNLCKQEEPRTKEECIEKYNLIASAPAAKDTIAAPAD-----------------------DKAWTEKEDTLLQDMLRKYPASMEKNERWKSIAEGVPGRSKKECVERFKAIREAVKTGKKARSNA 635          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEK9_THAOC)

HSP 1 Score: 107 bits (268), Expect = 5.170e-22
Identity = 69/191 (36.13%), Postives = 104/191 (54.45%), Query Frame = 1
Query:  475 AAEAKQRADREALVKAQLK----MGSDRESRK-------RAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 1014
            A E    A+R++L+K Q +      +D ++R+       + W + EL++LAKA+ K+PAG  NRWE I+ FI    + +DP  KE+CIA++ ++ ++P+       PA           KSA           D W+ +Q   L+  L +YP  MDKNERW+ I+  V GKSKKQCV RFK ++  +  KK
Sbjct:  463 AVETAAGAERQSLLKIQQRNANRQAADEKAREAKAARAAKPWTKEELAALAKAVKKYPAGGANRWESIALFINNLCKQQDPRGKEECIAQFNKVTSSPS-------PAAAPGGKEDDAGKSAEAG--------DEWTDAQDAALQDMLRKYPASMDKNERWSKIAEGVEGKSKKQCVGRFKAIREAVKGKK 638          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SB83_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.120e-21
Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 1
Query:  523 QLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRR-EPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKK 1017
            Q ++   RE +   W  +ELSSLAKA+ KFP G++NRW  + +++     +    ++EDCI +  +I A+    +K +             +K+A ++  ++  P E VWS  QQ  LEAAL ++P  MDKNERW SI+AAV GKSKK+CV RFK ++ ++LAKKK
Sbjct:  426 QKRLEKKREKQFAPWSADELSSLAKAMKKFPGGTRNRWMMVCKYLNTIPGSTVERTQEDCI-QQSKIMASDTEKRKDLG-----------TSKAAFDQFQKKLAPSEAVWSNEQQAALEAALKKFPASMDKNERWKSIAAAVEGKSKKECVARFKELRAKVLAKKK 579          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ84_THAPS)

HSP 1 Score: 105 bits (261), Expect = 3.040e-21
Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 1
Query:  565 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGP-----QKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVK 993
            W ++EL +LAKA+ K+PAG  NRWE I+ F+    +  +P SKE+CI KY  I A+ A P     +   A    + AP                     W++ Q   L+  L +YP  MDKNERW SI+  VPG+SKK+CV+RFK ++
Sbjct:  388 WTKDELGALAKAVKKYPAGGSNRWEAIALFVNNLCKQAEPRSKEECIEKYNSIAASAAPPSGSTDKDTAADGEDSGAP---------------------WTEEQDSLLQEMLRKYPADMDKNERWKSIAKGVPGRSKKECVDRFKAIR 514          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: DnaJ-domain-containing (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW12_9STRA)

HSP 1 Score: 103 bits (258), Expect = 8.600e-21
Identity = 60/147 (40.82%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  577 ELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAG-PQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 1014
            E+S+L+K + KFPAG  NRW+ IS +I    R  DP +KE+CI  + +++ A    P    + AV  S                     DVW+  Q QQL+  L  +P  ++KNERW+SIS  V GKSKK+CVERFK ++  L AKK
Sbjct:  430 EMSALSKGVKKFPAGGGNRWDQISHYINNVCRPDDPRTKEECIEIFNKVNKAGKQLPNGNTSHAVDDS---------------------DVWNSEQDQQLQKGLTMFPSSIEKNERWSSISDEVTGKSKKECVERFKAIRDALKAKK 555          
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9B7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.800e-20
Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 1
Query:  562 AWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 1014
            A+ + EL++LAKA+ KFPAG  NRW+ IS +I    R + P SKE+CI  + +   A   P K+        AP  A A SA E P+        W+  Q +QL+A L+ YP  M+KNERW+SI+  V GKSKK+CV RFK ++  L AKK
Sbjct:  604 AFTKEELAALAKAVKKFPAGG-NRWDLISNYINNVCRPEIPRSKEECIEVFNR-KPAKNKPGKM--------APVPASAASAGETPA------PCWTVEQDRQLQAGLSAYPSSMEKNERWSSIAGGVRGKSKKECVARFKEIRNALKAKK 738          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Heat4.930e-18692.38shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
Hypothetical2.010e-3339.93protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Predicted1.560e-2544.44protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Subfamily9.910e-2540.20c member 2 protein n=3 Tax=Monodopsidaceae TaxID=4... [more]
Hypothetical1.430e-2237.82protein n=1 Tax=Skeletonema marinoi TaxID=267567 R... [more]
Uncharacterized5.170e-2236.13protein n=1 Tax=Thalassiosira oceanica TaxID=15974... [more]
Hypothetical1.120e-2140.96protein n=1 Tax=labyrinthulid quahog parasite QPX ... [more]
Uncharacterized3.040e-2139.19protein n=1 Tax=Thalassiosira pseudonana TaxID=351... [more]
DnaJ-domain-containing8.600e-2140.82protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 ... [more]
Uncharacterized3.800e-2044.37protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8326contigH-canaliculatus_M_contigs8326:363..3835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FN52
PFAMsDnaJ,Myb_DNA-binding
Model size1062
Max annot lvl2759|Eukaryota
KEGG koko:K09522
Hectar predicted targeting categoryother localisation
GOsGO:0000082,GO:0000122,GO:0000278,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0000988,GO:0000989,GO:0001012,GO:0001067,GO:0001076,GO:0001077,GO:0001134,GO:0001135,GO:0001228,GO:0001701,GO:0001775,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006996,GO:0007049,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016043,GO:0016070,GO:0017145,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019904,GO:0022402,GO:0022407,GO:0022409,GO:0030001,GO:0030097,GO:0030098,GO:0030099,GO:0030154,GO:0030155,GO:0030183,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032774,GO:0033043,GO:0033044,GO:0034097,GO:0034641,GO:0034645,GO:0034654,GO:0035295,GO:0042113,GO:0042221,GO:0042592,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043370,GO:0043372,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045321,GO:0045580,GO:0045582,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045622,GO:0045624,GO:0045785,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046634,GO:0046635,GO:0046637,GO:0046638,GO:0046649,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048536,GO:0048538,GO:0048565,GO:0048566,GO:0048568,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048872,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051249,GO:0051251,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051569,GO:0051570,GO:0051571,GO:0051574,GO:0051716,GO:0055123,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070741,GO:0070838,GO:0070887,GO:0071310,GO:0071345,GO:0071354,GO:0071704,GO:0071840,GO:0071987,GO:0072511,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902105,GO:1902107,GO:1902275,GO:1902679,GO:1902680,GO:1903037,GO:1903039,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903708,GO:1905269,GO:1990823,GO:1990830,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000514,GO:2000516,GO:2001141,GO:2001252
Exons7
Evalue8.08e-187
EggNOG OGsKOG0724@1|root,KOG0724@2759|Eukaryota
Ec32 ortholog descriptionDnaJ (Hsp40) and SANT/Myb domain transcription factor
Ec32 orthologEc-06_008420.1
Descriptionubiquitin modification-dependent histone binding
Cds size1062
COG categoryK
BRITEko00000,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8326.1.1prot_H-canaliculatus_M_contigs8326.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8326 363..3835 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854147.9976664-CDS-H-canaliculatus_M_contigs8326:362..4371696854147.9976664-CDS-H-canaliculatus_M_contigs8326:362..437Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8326 363..437 +
1696854148.0143447-CDS-H-canaliculatus_M_contigs8326:697..8531696854148.0143447-CDS-H-canaliculatus_M_contigs8326:697..853Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8326 698..853 +
1696854148.032059-CDS-H-canaliculatus_M_contigs8326:1286..14511696854148.032059-CDS-H-canaliculatus_M_contigs8326:1286..1451Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8326 1287..1451 +
1696854148.0464194-CDS-H-canaliculatus_M_contigs8326:1807..19181696854148.0464194-CDS-H-canaliculatus_M_contigs8326:1807..1918Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8326 1808..1918 +
1696854148.0563364-CDS-H-canaliculatus_M_contigs8326:2832..29561696854148.0563364-CDS-H-canaliculatus_M_contigs8326:2832..2956Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8326 2833..2956 +
1696854148.0655131-CDS-H-canaliculatus_M_contigs8326:3222..34281696854148.0655131-CDS-H-canaliculatus_M_contigs8326:3222..3428Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8326 3223..3428 +
1696854148.0755157-CDS-H-canaliculatus_M_contigs8326:3610..38351696854148.0755157-CDS-H-canaliculatus_M_contigs8326:3610..3835Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8326 3611..3835 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8326.1.1

>prot_H-canaliculatus_M_contigs8326.1.1 ID=prot_H-canaliculatus_M_contigs8326.1.1|Name=mRNA_H-canaliculatus_M_contigs8326.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=354bp
RAVDPRIIRERVREREAKIAAKENKEREKREREQAKIQALEDEKKAKKDE
EERLRAIARQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGGTGSDAG
VTPVGEEDMEWLKENLLLEQLNAAISALGTEEDIKVEGLDVMKQLMERRK
MELKEEEEAAEAKQRADREALVKAQLKMGSDRESRKRAWEENELSSLAKA
IVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQK
VVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPM
GMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAEKKAAEAAAN
GGAT
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mRNA from alignment at H-canaliculatus_M_contigs8326:363..3835+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8326.1.1 ID=mRNA_H-canaliculatus_M_contigs8326.1.1|Name=mRNA_H-canaliculatus_M_contigs8326.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3473bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8326:363..3835+ (Hapterophycus canaliculatus Oshoro7m male)
AGGGCGGTGGATCCTCGTATCATCCGAGAAAGGGTAAGAGAGAGGGAGGC CAAGATTGCCGCCAAGGAAAACAAGGTGAGACTCGTGAGATTCACGTTCG GTTGACGAACAGTCGTCAGGTACTTGGCGTTTCGAGCATTCCAACCTCGT AAACGTGACTCGTATTTCTCACGCTGATCTGATTTTTTTTCAATATTTTC AAGCTCGGTTGAGATATGATCTCTAGGATTTATTCAAGGATGTTTCAAGT TGGATAAATTGAATCGCATCGTAAATTTGCCCTCGACGCGGGTGTGCTGA AAACGGTACAATGGATGGATAAAACTTGGTCGCAGGAGCGCGAGAAGCGG GAGCGGGAACAGGCCAAGATCCAGGCATTGGAAGACGAGAAGAAGGCCAA GAAAGACGAAGAGGAGCGTCTCAGAGCCATCGCCAGGCAGGCCAAGGCGG GCAGGGAAGCGCACAAGAAAGAAATGCGCAGGCGAAAGAAGGTAATCAGT TTTTGGTTAATTGTGGTATGCTGTTCGGCATTCGGCCCTATCATCGTGTG GGGGTGTGCTGTGCGCTGTGCTGCCTTGGATAGAGTGGGCCGAGTCAGAG CGAGAAAACAGATTTCATTGAACCGAAAGCGTTGCACAAGCTTCATATTT CCTGTCCATCTATGATTTGAAGGATTTGATCGTTTGAAGACTCGAGGTTG CCGTGTCGCACGATATTCCAAAACAGCGGTTAGTACGAAAAGTTTCAGAA AGTTAAGAAATGCTAAGTCGAAGGAAGGTACACCACGCACTGTTGGTGCG ATCGCGTTCGCGTTGTAGGCGAAGTGCGGAAGAATGTGCTGTTCCGCACA TGAAGGCTGCGCCGCCCACCCTCGCTCTTCTCCCGCTCCCCTCATCTCTT CGGCCTCCTGATTTCCGTCCCCAGGTAATGAAAAACCTCTATTCGTTGGC GGTAGCGCAGCTGACGGTCGGAGGGACCGGCAGCGACGCGGGTGTCACCC CGGTGGGCGAAGAGGACATGGAGTGGTTGAAGGAGAACCTGTTGCTTGAG CAACTGAACGCCGCGATCTCGGCCTTGGGGACGGAGGAGGTGAGGAACCA ACAGTGAATGGCGAAAGGTATCCCTCTCTGATAAATGCGATGTTTCATGG GCTACAGCAATACCTAACGCTTCTGATGCTTTTACCTTCTGCTTGCCGCT TTCTTTTGTCTGAAGGAAGATGACGTGGATTTCATCATTTGCTATGGGTG GCTTTTTTCTCCCGTTCTCTTTGTAATTGGCTATCCAACATGGGTTTCGC TCTGTCTTGTGTCGTTCGTTTCTGGGAACGTCAAGGACGCCAAGCTGGAT GTTGTTTCTTTTGGTGCTCGCAAGAAAAGCGCGGTGCTCCCACGCCCTCG CCGTGTCTCGCTCTCATCCTGCACATGTACCTTCCGCATATGCAGGACAT CAAGGTGGAAGGGTTAGATGTGATGAAACAACTTATGGAGCGGAGAAAGA TGGAGCTGAAAGAGGAGGAGGAGGCAGCGGAGGCCAAGCAACGCGCTGAC CGAGAAGTGAGTTAGATGGCTAGTTTTGCCTTGAAATTGGTGGACCGGTT TACTGTCCACCCAGTTTACTGTCCACCCAGAAGAAGCGCCGCAGGTGACA CAATGGTAGGCCCTTGTTCTTGAGGACCGTGGGAAAACTGGGTAGTGGGA ACACTGGGTGGTGAGGCATTGATTCTTCAAACCAGCACACGCAAGGTTAA TCCTTTCTTGGGTTCGAGGGGTGACGAGACGGAACCCGGGAAGGCAGGCG CGCATGGATGATGTCACCTCCTTCATGGATTGGTCCAGCATGATTAACAT GTTGCACGAAAATCTACCTTCGTAATCACCCGAAGAAGTACCATGTTATT TGTTGTCGGGTATGCCTACGAGTATGCTTTTTCCGAAGGTTTCTAGAGCT TGCGATGCACGTGCGGGATAAGCAGATGTTCATAAATCCGCAGGATTTTT TTTATAGCTTTCATGTACAATTGTACCTCGTGGTCGGAAGCAAAGATGCT GTGCTGAGCTTGCGAAGCGGCTGGTCGTTTGAGTGAGGGTGGTGCCTCGA CAGTACCAAAACACGCGCCTCGACCGAAATGTGTATCTTCCAACCAGCTC ACAATCTAGCAGGACGAAGTAATTGCAGTTTGTGACCACAGGCGTTGGCA GAGTCAAATGTCAAGCGCGGATTGCTTGATAAATGCTTGTTTTGAAACCT ACCTTTGCTTCGGCCATGGACTACGCTTCACACCTTCGATCCCCCCCTCT TCTCCCATGGTAACCAGGATTCTGGTTCACATCAAAGCGTATCCTGCCCG GTTCGATTTGTACAACGCACATCTGCTTTCCTTATTTAAACCCAAAGGAA CTAATAATTAACCCTCCGGCTCTCTTTTGGTATCTGTTGGCTGTGGATGG GATGTTGACCGTTCGCACAGGCGCTTGTCAAGGCGCAGCTTAAGATGGGG TCCGACCGCGAGTCTCGCAAGCGGGCGTGGGAAGAGAATGAGCTTTCATC CCTTGCAAAAGCTATCGTCAAGTTTCCGGCAGGGTCTCAAAACCGTGAGT TGGCGTGTCGTGAGCCTGCTTCCTTGTGTAGATAGCCCGGTGTTCGATTT TGATCCCGCTTTTTATCGGTTTGACGAACGCGTGAGGTGATTTTATACCT CTAGGAGTACATGCCGAGTCGATGTGACCATGTTAATCAGCTCATCGCCT ATGAATCTACGTCCTGCGAATCATGGGTCGAACAATCCAAGACGAGTACA GGTATTACATCTGGTGTGCTCTTGACGTTTTGTTTTATTCCTTTTGGGCT CGTCGTGCAGGTTGGGAGCACATCTCGCAATTCATTGCCCAGGCGACGCG TGCCAAAGATCCTTTCAGCAAGGAGGACTGCATCGCCAAGTATCAGCAGA TACACGCTGCGCCCGCCGGGCCTCAGAAGGTCGTGGCGCCAGCGGTGACG GCTTCCGCTCCCGCTGCGGCTGTGGCCAAGTCTGCGCCGGAGCGACCCTC CCGCCGAGAGCCGAGGGTGAGAAACAGCTGGAGAGGTTTACGACAACCTT TGGTACATGTCCACGCTACGATTGCTTTGCGCTTCCGTGGTGCGGCTATG CCTCGACTCGAGTCCATTGCCAATAGTTTGACTGCGCCCGAAGTCCGGCG GCGTCGATCACTGAACGACTATCAATTAACATTCCCTCTGCGCCGCAGGA GGACGTTTGGAGCCAGTCTCAGCAACAGCAGCTCGAGGCTGCGTTGGCCC GCTACCCGATGGGCATGGACAAGAACGAGCGGTGGGCGTCCATATCCGCC GCCGTCCCCGGCAAGAGCAAGAAGCAGTGCGTTGAGCGCTTCAAGTTCGT GAAGACCCAGCTGTTGGCCAAGAAAAAGGCGGAAAAGAAGGCAGCGGAGG CAGCGGCAAATGGGGGAGCGACA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8326:363..3835+

>mRNA_H-canaliculatus_M_contigs8326.1.1 ID=mRNA_H-canaliculatus_M_contigs8326.1.1|Name=mRNA_H-canaliculatus_M_contigs8326.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1062bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8326:363..3835+ (Hapterophycus canaliculatus Oshoro7m male)
AGGGCGGTGGATCCTCGTATCATCCGAGAAAGGGTAAGAGAGAGGGAGGC
CAAGATTGCCGCCAAGGAAAACAAGGAGCGCGAGAAGCGGGAGCGGGAAC
AGGCCAAGATCCAGGCATTGGAAGACGAGAAGAAGGCCAAGAAAGACGAA
GAGGAGCGTCTCAGAGCCATCGCCAGGCAGGCCAAGGCGGGCAGGGAAGC
GCACAAGAAAGAAATGCGCAGGCGAAAGAAGGTAATGAAAAACCTCTATT
CGTTGGCGGTAGCGCAGCTGACGGTCGGAGGGACCGGCAGCGACGCGGGT
GTCACCCCGGTGGGCGAAGAGGACATGGAGTGGTTGAAGGAGAACCTGTT
GCTTGAGCAACTGAACGCCGCGATCTCGGCCTTGGGGACGGAGGAGGACA
TCAAGGTGGAAGGGTTAGATGTGATGAAACAACTTATGGAGCGGAGAAAG
ATGGAGCTGAAAGAGGAGGAGGAGGCAGCGGAGGCCAAGCAACGCGCTGA
CCGAGAAGCGCTTGTCAAGGCGCAGCTTAAGATGGGGTCCGACCGCGAGT
CTCGCAAGCGGGCGTGGGAAGAGAATGAGCTTTCATCCCTTGCAAAAGCT
ATCGTCAAGTTTCCGGCAGGGTCTCAAAACCGTTGGGAGCACATCTCGCA
ATTCATTGCCCAGGCGACGCGTGCCAAAGATCCTTTCAGCAAGGAGGACT
GCATCGCCAAGTATCAGCAGATACACGCTGCGCCCGCCGGGCCTCAGAAG
GTCGTGGCGCCAGCGGTGACGGCTTCCGCTCCCGCTGCGGCTGTGGCCAA
GTCTGCGCCGGAGCGACCCTCCCGCCGAGAGCCGAGGGAGGACGTTTGGA
GCCAGTCTCAGCAACAGCAGCTCGAGGCTGCGTTGGCCCGCTACCCGATG
GGCATGGACAAGAACGAGCGGTGGGCGTCCATATCCGCCGCCGTCCCCGG
CAAGAGCAAGAAGCAGTGCGTTGAGCGCTTCAAGTTCGTGAAGACCCAGC
TGTTGGCCAAGAAAAAGGCGGAAAAGAAGGCAGCGGAGGCAGCGGCAAAT
GGGGGAGCGACA
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