mRNA_H-canaliculatus_M_contigs832.6.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs832.6.1
Unique NamemRNA_H-canaliculatus_M_contigs832.6.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Caax (alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZT4_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.340e-7
Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 1 
Query:   22 QDGRNSELSAVDSLLKEDLRNNSAWNHRWFVVHS-SLGP---------GGGLSD---EASVLRSW 177
            Q G   E++ VD+LLKED RNNSAWN RWFVVH+  L P         GGG +D   E  +  +W
Sbjct:  181 QAGWEEEMAFVDTLLKEDRRNNSAWNQRWFVVHTHELSPYHLEREGGRGGGKADAIREREMAYAW 245
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Protein (farnesyltransferase, alpha subunit n=3 Tax=Moesziomyces TaxID=63261 RepID=M9MFS1_PSEA3)

HSP 1 Score: 53.5 bits (127), Expect = 9.240e-7
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 1 
Query:   40 ELSAVDSLLKEDLRNNSAWNHRWFVVHSSLGPGGGLSDEASVLR 171
            EL  VD LL+ED+RNNSAWNHRW+V  +  G    +S  ASV +
Sbjct:  217 ELGYVDELLREDVRNNSAWNHRWYVCFARFG----ISAHASVAK 256
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Putative (farnesyltransferase alpha subunit ram2 protein n=1 Tax=Botryosphaeria parva (strain UCR-NP2) TaxID=1287680 RepID=R1ETH4_BOTPV)

HSP 1 Score: 53.1 bits (126), Expect = 1.200e-6
Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:   40 ELSAVDSLLKEDLRNNSAWNHRWFVVHSSLGPGGGLSDEASVLR 171
            E+ AVD+LL+ED+RNNSAWNHRWF+V +  G  G  S +  + R
Sbjct:  159 EIEAVDALLREDVRNNSAWNHRWFLVFA--GNPGSFSQKVVLDR 200
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Protein (prenylyltransferase n=4 Tax=Venturia TaxID=5024 RepID=A0A4Z1PVC3_9PEZI)

HSP 1 Score: 53.1 bits (126), Expect = 1.210e-6
Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 1 
Query:   40 ELSAVDSLLKEDLRNNSAWNHRWFVVHSSLGPGGGLSDEASVLR 171
            EL A ++LLK D+RNNSAWNHRWFVV         L DE+ V R
Sbjct:  159 ELEACETLLKMDVRNNSAWNHRWFVVFGRDEGNAVLRDESVVQR 202
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Uncharacterized (protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E9S2_MIXOS)

HSP 1 Score: 52.4 bits (124), Expect = 2.330e-6
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 1 
Query:   40 ELSAVDSLLKEDLRNNSAWNHRWFVVHSS 126
            EL   +SLL EDLRNNSAWNHRWFVV+ S
Sbjct:  192 ELDYAESLLNEDLRNNSAWNHRWFVVYGS 220
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9P4X5_PSEHS)

HSP 1 Score: 52.4 bits (124), Expect = 2.370e-6
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 1 
Query:   37 SELSAVDSLLKEDLRNNSAWNHRWFVVHSSLGPGGGLSDEASVLRS 174
            +E+  VD LL+ED+RNNSAWNHRWFV+    G     S  ++ L S
Sbjct:  215 AEVDYVDRLLQEDVRNNSAWNHRWFVLFGRYGLTSSSSTPSTKLES 260
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gomphillus americanus TaxID=1940652 RepID=A0A8H3FJJ8_9LECA)

HSP 1 Score: 51.6 bits (122), Expect = 4.280e-6
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 1 
Query:    4 FHMLDTQDGRNSELSAVDSLLKEDLRNNSAWNHRWFVV 117
            F +  T +G+ SEL  +DSLL  D+RNNSAWNHR+FV+
Sbjct:  156 FSLWPTSEGKGSELFFIDSLLTNDVRNNSAWNHRYFVL 193
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Uncharacterized (protein n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7HKU7_9PEZI)

HSP 1 Score: 51.6 bits (122), Expect = 4.300e-6
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 1 
Query:   40 ELSAVDSLLKEDLRNNSAWNHRWFVVHSSLGPGGGLSDEASVL 168
            EL+A   LL+ED+RNNSAWNHR+FVV   LG G     EA+V+
Sbjct:  180 ELAATAKLLEEDVRNNSAWNHRYFVVFGKLGAG--KPAEAAVV 220
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3X3_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.860e-6
Identity = 21/42 (50.00%), Postives = 25/42 (59.52%), Query Frame = 1 
Query:   40 ELSAVDSLLKEDLRNNSAWNHRWFVVHSSLGPGGGLSDEASV 165
            E    ++L+  DLRNNSAWNH WFV H   G GG  S   S+
Sbjct:    8 EREYANTLISTDLRNNSAWNHLWFVAHRGGGSGGSTSTPLSI 49
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BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Match: Uncharacterized (protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8A266_DACHA)

HSP 1 Score: 51.2 bits (121), Expect = 5.980e-6
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 1 
Query:   40 ELSAVDSLLKEDLRNNSAWNHRWFVVHSSLGPGGGLSDEASVLR 171
            EL+A  SLL+ED+RNNSAWNHR+F+V   LG  G   +E  V R
Sbjct:  181 ELAATASLLEEDVRNNSAWNHRYFIVLGRLGEAG--PEEGVVER 222
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs832.6.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Caax1.340e-747.69alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W... [more]
Protein9.240e-754.55farnesyltransferase, alpha subunit n=3 Tax=Moeszio... [more]
Putative1.200e-654.55farnesyltransferase alpha subunit ram2 protein n=1... [more]
Protein1.210e-656.82prenylyltransferase n=4 Tax=Venturia TaxID=5024 Re... [more]
Uncharacterized2.330e-675.86protein n=1 Tax=Mixia osmundae (strain CBS 9802 / ... [more]
Uncharacterized2.370e-650.00protein n=1 Tax=Pseudozyma hubeiensis (strain SY62... [more]
Uncharacterized4.280e-657.89protein n=1 Tax=Gomphillus americanus TaxID=194065... [more]
Uncharacterized4.300e-658.14protein n=1 Tax=Drechslerella stenobrocha 248 TaxI... [more]
Hypothetical5.860e-650.00protein (Fragment) n=1 Tax=Proboscia inermis TaxID... [more]
Uncharacterized5.980e-656.82protein n=1 Tax=Dactylellina haptotyla (strain CBS... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs832contigH-canaliculatus_M_contigs832:11116..11295 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog310453.XP_007581439.1
Preferred nameRAM2
PFAMsPPTA
Model size180
Max annot lvl4751|Fungi
KEGG rclassRC00069,RC03004
KEGG koko:K05955
KEGG ReactionR09844
KEGG Pathwayko00900,ko01130,map00900,map01130
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0004659,GO:0004660,GO:0004661,GO:0004662,GO:0004663,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005953,GO:0005965,GO:0006464,GO:0006807,GO:0007323,GO:0008104,GO:0008150,GO:0008152,GO:0008318,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018342,GO:0018343,GO:0018344,GO:0019538,GO:0032991,GO:0033036,GO:0034613,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051604,GO:0051641,GO:0070727,GO:0071704,GO:0072657,GO:0072659,GO:0097354,GO:0140096,GO:1901564,GO:1902494,GO:1990234,GO:1990778
Exons1
Evalue1.74e-07
EggNOG OGsCOG5536@1|root,KOG0530@2759|Eukaryota,38GA2@33154|Opisthokonta,3NV0Q@4751|Fungi,3QKGG@4890|Ascomycota,200KX@147541|Dothideomycetes
EC2.5.1.58,2.5.1.59
DescriptionProtein prenyltransferase alpha subunit repeat
Cds size171
COG categoryO
BRITEko00000,ko00001,ko01000,ko01006
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854147.525005-UTR-H-canaliculatus_M_contigs832:11115..111241696854147.525005-UTR-H-canaliculatus_M_contigs832:11115..11124Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs832 11116..11124 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854147.5445197-CDS-H-canaliculatus_M_contigs832:11124..112951696854147.5445197-CDS-H-canaliculatus_M_contigs832:11124..11295Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs832 11125..11295 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs832.6.1prot_H-canaliculatus_M_contigs832.6.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs832 11125..11295 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs832.6.1

>prot_H-canaliculatus_M_contigs832.6.1 ID=prot_H-canaliculatus_M_contigs832.6.1|Name=mRNA_H-canaliculatus_M_contigs832.6.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=57bp
MLDTQDGRNSELSAVDSLLKEDLRNNSAWNHRWFVVHSSLGPGGGLSDEA
SVLRSW*
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mRNA from alignment at H-canaliculatus_M_contigs832:11116..11295+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs832.6.1 ID=mRNA_H-canaliculatus_M_contigs832.6.1|Name=mRNA_H-canaliculatus_M_contigs832.6.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=180bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs832:11116..11295+ (Hapterophycus canaliculatus Oshoro7m male)
GAGTTTCACATGCTGGACACGCAGGATGGGCGAAACTCGGAGCTCTCGGC
GGTGGACTCCCTCCTGAAAGAAGACCTGAGGAACAACTCCGCCTGGAACC
ATCGATGGTTCGTCGTGCACTCTTCGCTGGGACCCGGGGGGGGGTTGTCA
GATGAGGCAAGTGTGCTTCGATCGTGGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs832:11116..11295+

>mRNA_H-canaliculatus_M_contigs832.6.1 ID=mRNA_H-canaliculatus_M_contigs832.6.1|Name=mRNA_H-canaliculatus_M_contigs832.6.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=171bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs832:11116..11295+ (Hapterophycus canaliculatus Oshoro7m male)
ATGCTGGACACGCAGGATGGGCGAAACTCGGAGCTCTCGGCGGTGGACTC
CCTCCTGAAAGAAGACCTGAGGAACAACTCCGCCTGGAACCATCGATGGT
TCGTCGTGCACTCTTCGCTGGGACCCGGGGGGGGGTTGTCAGATGAGGCA
AGTGTGCTTCGATCGTGGTAA
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