mRNA_H-canaliculatus_M_contigs8310.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8310.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8310.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT0_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 7.190e-81
Identity = 116/132 (87.88%), Postives = 128/132 (96.97%), Query Frame = 1 
Query:    1 MTEQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDPPPTREKK 396
            M+EQ+L+KRL+ LVKTG+NRFCADCGKREPRWASVNLGLFICLDCSG+HRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEA VPASY+VPREHATVRERE+WIRDKYEHRRFV+R+P P R++K
Sbjct:    1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQRK 132
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P5_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 2.700e-79
Identity = 116/132 (87.88%), Postives = 127/132 (96.21%), Query Frame = 1 
Query:    1 MTEQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDPPPTREKK 396
            MTEQ+L+KRL+ LVKTG+NRFCADCGKREPRWASVNLGLFICLDCSG+HRNLGVHISFVRSVNLDTWKPAQV+GMEEMGNERAKAHFEA VPASY+VPREHATVRERE+WIRDKYEHRRFV+R P P R++K
Sbjct:    1 MTEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVQGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRSPQPARQRK 132
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Arf-GAP (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F7_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.460e-59
Identity = 89/125 (71.20%), Postives = 101/125 (80.80%), Query Frame = 1 
Query:    1 MTEQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDP 375
            MT    KKRL+ LVK  DNRFCADCG REPRWASVNLGLFICL CSG+HRNLGVHISFVRSVNLDTWK  QV  ME +GN RAKA++EANVP    VP E ++VRE ++WIR KYEH+R++AR P
Sbjct:    1 MTSPQDKKRLEALVKREDNRFCADCGCREPRWASVNLGLFICLGCSGIHRNLGVHISFVRSVNLDTWKTEQVDKMERIGNARAKAYYEANVPPGTPVPTESSSVRELDKWIRSKYEHKRYIARGP 125
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXM8_HETAK)

HSP 1 Score: 181 bits (460), Expect = 1.970e-56
Identity = 80/126 (63.49%), Postives = 101/126 (80.16%), Query Frame = 1 
Query:    4 TEQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDPPP 381
            +E+  K+RL  L K  +N+FC DCG REPRWAS  LG+F+C+ CSG+HRNLGVHISFVRSVNLD+W+   V+ ME  GN RA+A+FEA VP++Y +P E +T RE E+WIRDKYEHRRF+AR+PPP
Sbjct:   15 SEEDHKRRLTALTKKDENKFCIDCGAREPRWASATLGVFMCIRCSGIHRNLGVHISFVRSVNLDSWREDHVQRMERWGNGRARAYFEAEVPSNYPIPGERSTTREVEKWIRDKYEHRRFLAREPPP 140
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT74_9STRA)

HSP 1 Score: 181 bits (460), Expect = 3.480e-53
Identity = 82/125 (65.60%), Postives = 100/125 (80.00%), Query Frame = 1 
Query:    4 TEQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDPP 378
            + Q  K RL+ +VK+GDN+FCADCG REPRWAS  LG+FIC+ CSG+HRNLGVHISFVRSVNLDTWK   V+ ME  GN RA  +FEA+VP +Y +P E ++ RE ERWIRDKYE+R+F AR+PP
Sbjct:   15 SHQDHKVRLEAMVKSGDNKFCADCGAREPRWASATLGVFICIRCSGIHRNLGVHISFVRSVNLDTWKEDHVRKMEAWGNARAAEYFEADVPPNYRIPDEKSSTRELERWIRDKYEYRKFAARNPP 139
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQV0_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.380e-52
Identity = 77/124 (62.10%), Postives = 102/124 (82.26%), Query Frame = 1 
Query:    7 EQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDPP 378
            +  LKK+L+ L+K  +N+FCADCG R PRWAS+NLG+FIC+ CSG+HR+LGVH++FVRSVNLD+W P QV+ M+  GN RAKA++EA VP  Y +P EHA+VRE+E WIR+KYE +RFV ++PP
Sbjct:   12 QTKLKKKLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKAYYEATVPRDYRIPTEHASVREKEMWIREKYERKRFVGQEPP 135
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Arf-GAP (domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4X3_PHYSP)

HSP 1 Score: 171 bits (433), Expect = 2.780e-52
Identity = 75/123 (60.98%), Postives = 99/123 (80.49%), Query Frame = 1 
Query:    7 EQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDP 375
            +  LKK+L+ L+K  +N+FCADCG R PRWAS+NLG+FIC+ CSG+HR+LGVH++FVRSVNLD+W   QV+ M+  GN RAKA++EANVP  Y +P EH++VRE+E WIR+KYE +RFV   P
Sbjct:   13 QTKLKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTSEQVQQMQRWGNARAKAYYEANVPRDYRIPTEHSSVREKEMWIREKYERKRFVGEAP 135
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9N7_PYTIN)

HSP 1 Score: 176 bits (446), Expect = 6.910e-51
Identity = 78/123 (63.41%), Postives = 99/123 (80.49%), Query Frame = 1 
Query:   16 LKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDPPPT 384
            LKK LD L K  +N+FCADCG R PRWAS+NLG+FIC+ CSG+HR+LGVH++FVRSVNLD W   QV  M++ GN RAKA++EA+VP  Y +P EH++VRE+E WIRDKYE +RF AR+ PP+
Sbjct:   17 LKKILDELTKREENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDAWTAEQVAQMQKWGNARAKAYYEAHVPRDYRIPNEHSSVREKEMWIRDKYERKRFAARNEPPS 139
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D8K1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.190e-50
Identity = 77/119 (64.71%), Postives = 96/119 (80.67%), Query Frame = 1 
Query:   16 LKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARD 372
            LKK LD L+K  DNRFCADCG R PRWAS+NLG+FIC+ CSG+HR+LGVH++FVRSVNLD+W   QV  M++ GN +AK +FEA VP  Y +P EH+ VR++E WIRDKYE +RF+ARD
Sbjct:   15 LKKILDELMKRDDNRFCADCGARGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTGDQVAQMQKWGNAKAKDYFEALVPKDYRIPTEHSPVRDKEIWIRDKYERKRFIARD 133
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQC6_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.260e-50
Identity = 77/130 (59.23%), Postives = 102/130 (78.46%), Query Frame = 1 
Query:    7 EQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPREHATVRERERWIRDKYEHRRFVARDPPPTREKK 396
            +  LKK+L+ L+K  +N+FCADCG R PRWAS+NLG+FIC+ CSG+HR+LGVH++FVRSVNLD+W P QV  M+  GN +AK ++EANVP  Y VP EH++VRE+E WIR+KYE +RFV   P   RE++
Sbjct:   10 QTKLKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVAQMQRWGNAKAKGYYEANVPRDYRVPTEHSSVREKEMWIREKYERKRFVGEAPREEREER 139
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8310.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Arf-GAP7.190e-8187.88domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Arf-GAP2.700e-7987.88domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Arf-GAP1.460e-5971.20domain-containing protein (Fragment) n=1 Tax=Tribo... [more]
Hypothetical1.970e-5663.49protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical3.480e-5365.60protein (Fragment) n=2 Tax=Fibrocapsa japonica Tax... [more]
Arf-GAP2.380e-5262.10domain-containing protein n=1 Tax=Phytophthora ker... [more]
Arf-GAP2.780e-5260.98domain-containing protein (Fragment) n=1 Tax=Phyto... [more]
Arf-GAP6.910e-5163.41domain-containing protein n=1 Tax=Pythium insidios... [more]
Arf-GAP1.190e-5064.71domain-containing protein n=1 Tax=Aphanomyces asta... [more]
Arf-GAP1.260e-5059.23domain-containing protein n=1 Tax=Phytophthora meg... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8310contigH-canaliculatus_M_contigs8310:3..2130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LBT0
Preferred nameAGD15
PFAMsArfGap
Model size396
Max annot lvl2759|Eukaryota
KEGG koko:K12486
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001558,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0007275,GO:0008150,GO:0009791,GO:0009838,GO:0009908,GO:0009987,GO:0010227,GO:0012505,GO:0016043,GO:0016192,GO:0022414,GO:0022607,GO:0030135,GO:0030136,GO:0030276,GO:0030308,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0034622,GO:0035459,GO:0035652,GO:0040008,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0043933,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045926,GO:0048367,GO:0048437,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0060858,GO:0061458,GO:0065003,GO:0065007,GO:0065009,GO:0071840,GO:0090567,GO:0090630,GO:0097708,GO:0098791,GO:0099402
Exons3
Evalue1.18e-81
EggNOG OGsCOG5347@1|root,KOG0703@2759|Eukaryota
Ec32 ortholog descriptionArf GTPase activating protein
Ec32 orthologEc-27_002820.1
DescriptionGTPase activator activity
Cds size396
COG categoryU
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854146.8548253-CDS-H-canaliculatus_M_contigs8310:2..1791696854146.8548253-CDS-H-canaliculatus_M_contigs8310:2..179Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8310 3..179 -
1696854146.8731792-CDS-H-canaliculatus_M_contigs8310:666..8001696854146.8731792-CDS-H-canaliculatus_M_contigs8310:666..800Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8310 667..800 -
1696854146.888051-CDS-H-canaliculatus_M_contigs8310:2045..21301696854146.888051-CDS-H-canaliculatus_M_contigs8310:2045..2130Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8310 2046..2130 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8310.1.1prot_H-canaliculatus_M_contigs8310.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8310 3..2130 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8310.1.1

>prot_H-canaliculatus_M_contigs8310.1.1 ID=prot_H-canaliculatus_M_contigs8310.1.1|Name=mRNA_H-canaliculatus_M_contigs8310.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=132bp
MTEQSLKKRLDVLVKTGDNRFCADCGKREPRWASVNLGLFICLDCSGVHR
NLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEANVPASYSVPRE
HATVRERERWIRDKYEHRRFVARDPPPTREKK
back to top

mRNA from alignment at H-canaliculatus_M_contigs8310:3..2130-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8310.1.1 ID=mRNA_H-canaliculatus_M_contigs8310.1.1|Name=mRNA_H-canaliculatus_M_contigs8310.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2128bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8310:3..2130- (Hapterophycus canaliculatus Oshoro7m male)
ATGACGGAGCAGTCGTTGAAGAAGCGCCTGGATGTGTTGGTGAAGACGGG
AGACAACCGCTTCTGCGCTGACTGTGGCAAGCGAGGTGCGGGTGTGCGGC
CTAACTAACACTTTGATATTTTGATGCGTGCCAGAGAGCAATGTCCCTCT
CCAAGGTTCGTGTCGCATGTCCGTCATGACGTCCGCTAGAGGAGAACGCA
GGGCCCGCACGAAGTCCTGCAGAAGAAGTCTTCATCCCCGTGGACTTGAG
AGGGGTGTCGCCTGCATCCCCTTGCGGTTCAGCTCTGCTCGGCGTGTCCC
AGAGTCGAGGGCGCTCTTCGACGACCGCCGGCTCCTCTCGACCGGGATGA
TCGACCCCTCCGAACGGCAATCGCTTCCGTCGCTTCCGCCTCCGCCCTCT
CCGTTCGTCTGTGTGTTTTACGAGCGTGTTGACTGCTCTCGCATCTCTCA
CCCAGCCTCGCCGCAAGTACACCCACGGAGGCGGGCTGTGCCGGACGAGC
CCTAATTGAGCTTTGCACTCGAACACGCGAGGTCGACGGCAGTGACGGGA
GCGTAGACGACTCTTCGAATTTTGAATTTTCCGTGCGCCCAACCGTGATC
CAAGCCTTAATTTGTCGCAAGAGGCACCGCAGAACATTTTGTCAACACCA
GTACACTCAGTAAATACTCATGTTTTCTATAAAAATACCTTACCTGGGTC
GTCGATGCCCACCTTCTCTGTGCCATCGCCGCTAGACGCTGGTCTGGCTT
CCAACAGAGACGAAGAACACAAGCTCTCGCCATGTGTTGCAGGGTACTGA
ACTACCGTTTCAGGCTTGGGACCGACTCCTCCTTCTCTGCGCGGTGCCGC
GGATCGAACGGCAGCGTGTTGTTGTCCAGGGTTCGTCCACGCCAACGACA
CCCGCCCACTCCCCTGAGCCAAAGGCTTGGGTTTCTCATTCCCACTCTTG
CTGTGATTGCGTGCACTGCTGCCCTTCGTACGCCGTACAAACAGCACGGC
ACAGGTTCATTTATTCGCGAGACGCCTTCTCCGGACGAGGCGTTGCGCCG
CGCCATTTCCGCCCCCCTCAGCCATGCACTCTCGGAGAAAAGCTCTTGGT
CGAGCACATGCACAAAGCAAAGCACCGTCCCGACTCGAGGAGGGAGCCCA
GTGGCCTCCTCCCTGTTCCCACCCAGACCCTCTTCCCGGTCGGCAAACGA
AATCCAACGCCGCCGCGATTCGCCCTCGAAAAGCTCGCGCGGTGGGTCTT
TCTCACAATATTTTTCTTCCCTCTTAACCCCGTTCGTCGCTGCTGCACAC
GTCTGCGCGCGCTGCTCTCGGCGGGAACAGAGCCTCGCTGGGCCTCCGTC
AACCTCGGCCTTTTCATTTGCCTGGACTGCTCCGGCGTCCACCGCAACTT
GGGAGTGCACATCTCGTTCGTTCGCAGCGTCAACCTCGACACCTGGAAGC
CCGCCCAAGTTAAGGTACGCGCAGGTCACATGAAACAGGTCGGAGATGAC
CAGGGTGGTTCCTTTTAGTCCACACGTGTTTGTCCGTCTCACGTGCTCCG
TGCGCGGACCAAGGCTGCAACCCTCCACCGATAGCTTGAGAGTTTCACCG
GCGAAAGAGGAAGAGACAGGCACGCCGCTCGAAGTCTGTATCTGCGTAGC
GTCTTGCTCCGCTCCTAGATACTGGAAGACGCTGCCGCGTATACTGGAGG
GCGCTGCTGCTGCATGCCTATCTCGCGGCTTTCGACGGCTGAAGAGCGTT
GTCGTGCTGCGGGCCGTTTGTCGCCTGGCGCTGCCGCCGCTCCGGCCGCT
TCTGTGCGCGACGCTTCCAAGGCCTCTGCGCTCCCATGCCCTCGGCTCGT
ACGCCCCCTCACTTGCACGGGCGTTCTTGTTTCTTGTTTGTCTTGCTTTG
CGCCGTCCTGTACACGCGTTGGCCGTTTACACGTTGATGTCCACCGCCCA
GGGTATGGAGGAAATGGGCAACGAGCGAGCGAAGGCTCACTTCGAGGCCA
ACGTGCCGGCCAGCTACTCGGTGCCCCGTGAGCATGCCACCGTCCGCGAG
CGCGAGAGGTGGATCAGGGACAAGTACGAGCACCGGCGCTTCGTGGCGAG
GGATCCCCCCCCCACCCGAGAAAAAAAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8310:3..2130-

>mRNA_H-canaliculatus_M_contigs8310.1.1 ID=mRNA_H-canaliculatus_M_contigs8310.1.1|Name=mRNA_H-canaliculatus_M_contigs8310.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=396bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8310:3..2130- (Hapterophycus canaliculatus Oshoro7m male)
ATGACGGAGCAGTCGTTGAAGAAGCGCCTGGATGTGTTGGTGAAGACGGG
AGACAACCGCTTCTGCGCTGACTGTGGCAAGCGAGAGCCTCGCTGGGCCT
CCGTCAACCTCGGCCTTTTCATTTGCCTGGACTGCTCCGGCGTCCACCGC
AACTTGGGAGTGCACATCTCGTTCGTTCGCAGCGTCAACCTCGACACCTG
GAAGCCCGCCCAAGTTAAGGGTATGGAGGAAATGGGCAACGAGCGAGCGA
AGGCTCACTTCGAGGCCAACGTGCCGGCCAGCTACTCGGTGCCCCGTGAG
CATGCCACCGTCCGCGAGCGCGAGAGGTGGATCAGGGACAAGTACGAGCA
CCGGCGCTTCGTGGCGAGGGATCCCCCCCCCACCCGAGAAAAAAAG
back to top